RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 UVSSAQ2YD98 709 aa10.45□□□□□ -0.74
NEDD9-203ENST00000397378 C1orf228Q6PIY5 440 aa10.45□□□□□ -0.74
NEDD9-203ENST00000397378 RTL10Q7L3V2 364 aa10.45□□□□□ -0.74
NEDD9-203ENST00000397378 OTUD6AQ7L8S5 288 aa10.45□□□□□ -0.74
NEDD9-203ENST00000397378 FAM177A1Q8N128 213 aaPredicted RBP10.45□□□□□ -0.74
NEDD9-203ENST00000397378 DAGLBQ8NCG7 672 aa10.45□□□□□ -0.74
NEDD9-203ENST00000397378 HASPINQ8TF76 798 aa10.45□□□□□ -0.74
NEDD9-203ENST00000397378 PIK3R5Q8WYR1 880 aa10.45□□□□□ -0.74
NEDD9-203ENST00000397378 MSANTD3Q96H12 275 aa10.45□□□□□ -0.74
NEDD9-203ENST00000397378 CPB2Q96IY4 423 aa10.45□□□□□ -0.74
NEDD9-203ENST00000397378 ZC3H10Q96K80 434 aaKnown RBP10.45□□□□□ -0.74
NEDD9-203ENST00000397378 ASB16Q96NS5 453 aa10.45□□□□□ -0.74
NEDD9-203ENST00000397378 TRIM6Q9C030 488 aaPredicted RBP10.45□□□□□ -0.74
NEDD9-203ENST00000397378 NXF3Q9H4D5 531 aaKnown RBP10.45□□□□□ -0.74
NEDD9-203ENST00000397378 SLC32A1Q9H598 525 aa10.45□□□□□ -0.74
NEDD9-203ENST00000397378 CACNA2D2Q9NY47 1150 aa10.45□□□□□ -0.74
NEDD9-203ENST00000397378 DDX25Q9UHL0 483 aaKnown RBP10.45□□□□□ -0.74
NEDD9-203ENST00000397378 NRG2O14511 850 aaPredicted RBP10.44□□□□□ -0.74
NEDD9-203ENST00000397378 KHNYNO15037 678 aaKnown RBP10.44□□□□□ -0.74
NEDD9-203ENST00000397378 ADAM12O43184 909 aa10.44□□□□□ -0.74
NEDD9-203ENST00000397378 SLC37A4O43826 429 aa10.44□□□□□ -0.74
NEDD9-203ENST00000397378 AKAP3O75969 853 aa10.44□□□□□ -0.74
NEDD9-203ENST00000397378 PRB1P04280 392 aa10.44□□□□□ -0.74
NEDD9-203ENST00000397378 CPA1P15085 419 aa10.44□□□□□ -0.74
NEDD9-203ENST00000397378 ARF4P18085 180 aaPredicted RBP10.44□□□□□ -0.74
NEDD9-203ENST00000397378 YWHABP31946 246 aaKnown RBP10.44□□□□□ -0.74
NEDD9-203ENST00000397378 RDXP35241 583 aaKnown RBP10.44□□□□□ -0.74
NEDD9-203ENST00000397378 SOX9P48436 509 aa10.44□□□□□ -0.74
NEDD9-203ENST00000397378 SCAPQ12770 1279 aa10.44□□□□□ -0.74
NEDD9-203ENST00000397378 TFDP1Q14186 410 aa10.44□□□□□ -0.74
NEDD9-203ENST00000397378 HSP90AA2PQ14568 343 aaPredicted RBP10.44□□□□□ -0.74
NEDD9-203ENST00000397378 EPHA7Q15375 998 aa10.44□□□□□ -0.74
NEDD9-203ENST00000397378 NPY5RQ15761 445 aa10.44□□□□□ -0.74
NEDD9-203ENST00000397378 AMHR2Q16671 573 aa10.44□□□□□ -0.74
NEDD9-203ENST00000397378 PLK5Q496M5 336 aa10.44□□□□□ -0.74
NEDD9-203ENST00000397378 BMP2KLQ5H9B9 411 aa10.44□□□□□ -0.74
NEDD9-203ENST00000397378 WDR44Q5JSH3 913 aa10.44□□□□□ -0.74
NEDD9-203ENST00000397378 FAM171A1Q5VUB5 890 aa10.44□□□□□ -0.74
NEDD9-203ENST00000397378 GALNT17Q6IS24 598 aa10.44□□□□□ -0.74
NEDD9-203ENST00000397378 PDXDC1Q6P996 788 aa10.44□□□□□ -0.74
NEDD9-203ENST00000397378 BLIDQ8IZY5 108 aa10.44□□□□□ -0.74
NEDD9-203ENST00000397378 LNX1Q8TBB1 728 aaPredicted RBP10.44□□□□□ -0.74
NEDD9-203ENST00000397378 DEPDC1BQ8WUY9 529 aa10.44□□□□□ -0.74
NEDD9-203ENST00000397378 KCNB2Q92953 911 aa10.44□□□□□ -0.74
NEDD9-203ENST00000397378 MTRQ99707 1265 aa10.44□□□□□ -0.74
NEDD9-203ENST00000397378 TTPALQ9BTX7 342 aa10.44□□□□□ -0.74
NEDD9-203ENST00000397378 NFKBIZQ9BYH8 718 aa10.44□□□□□ -0.74
NEDD9-203ENST00000397378 KCNMB3Q9NPA1 279 aa10.44□□□□□ -0.74
NEDD9-203ENST00000397378 CACNG4Q9UBN1 327 aa10.44□□□□□ -0.74
NEDD9-203ENST00000397378 BPTFQ12830 3046 aa10.43□□□□□ -0.74
NEDD9-203ENST00000397378 CCDC163A0A0D9SF12 145 aa10.43□□□□□ -0.74
NEDD9-203ENST00000397378 SPAARA0A1B0GVQ0 90 aa10.43□□□□□ -0.74
NEDD9-203ENST00000397378 INO80B-WBP1J3KQ70 363 aa10.43□□□□□ -0.74
NEDD9-203ENST00000397378 CDX4O14627 284 aaPredicted RBP10.43□□□□□ -0.74
NEDD9-203ENST00000397378 RHOBTB1O94844 696 aa10.43□□□□□ -0.74
NEDD9-203ENST00000397378 LRG1P02750 347 aa10.43□□□□□ -0.74
NEDD9-203ENST00000397378 PTPN2P17706 415 aa10.43□□□□□ -0.74
NEDD9-203ENST00000397378 AKAP5P24588 427 aa10.43□□□□□ -0.74
NEDD9-203ENST00000397378 OR1D2P34982 312 aa10.43□□□□□ -0.74
NEDD9-203ENST00000397378 EVCP57679 992 aa10.43□□□□□ -0.74
NEDD9-203ENST00000397378 SIM1P81133 766 aaPredicted RBP10.43□□□□□ -0.74
NEDD9-203ENST00000397378 MBTD1Q05BQ5 628 aa10.43□□□□□ -0.74
NEDD9-203ENST00000397378 ELAVL2Q12926 359 aaKnown RBP10.43□□□□□ -0.74
NEDD9-203ENST00000397378 TUSC3Q13454 348 aa10.43□□□□□ -0.74
NEDD9-203ENST00000397378 XKR9Q5GH70 373 aa10.43□□□□□ -0.74
NEDD9-203ENST00000397378 PPP4R3AQ6IN85 833 aa10.43□□□□□ -0.74
NEDD9-203ENST00000397378 SLC27A1Q6PCB7 646 aa10.43□□□□□ -0.74
NEDD9-203ENST00000397378 BLOC1S2Q6QNY1 142 aa10.43□□□□□ -0.74
NEDD9-203ENST00000397378 LURAP1LQ8IV03 231 aa10.43□□□□□ -0.74
NEDD9-203ENST00000397378 YAF2Q8IY57 180 aa10.43□□□□□ -0.74
NEDD9-203ENST00000397378 TRIM22Q8IYM9 498 aa10.43□□□□□ -0.74
NEDD9-203ENST00000397378 TCEAL4Q96EI5 215 aa10.43□□□□□ -0.74
NEDD9-203ENST00000397378 CORO1BQ9BR76 489 aa10.43□□□□□ -0.74
NEDD9-203ENST00000397378 LXNQ9BS40 222 aa10.43□□□□□ -0.74
NEDD9-203ENST00000397378 DUSP15Q9H1R2 295 aaPredicted RBP10.43□□□□□ -0.74
NEDD9-203ENST00000397378 C8orf33Q9H7E9 229 aaPredicted RBP10.43□□□□□ -0.74
NEDD9-203ENST00000397378 XPNPEP1Q9NQW7 623 aa10.43□□□□□ -0.74
NEDD9-203ENST00000397378 BMP2KQ9NSY1 1161 aaPredicted RBP10.43□□□□□ -0.74
NEDD9-203ENST00000397378 SLC8A2Q9UPR5 921 aa10.43□□□□□ -0.74
NEDD9-203ENST00000397378 NAV2Q8IVL1 2488 aa10.43□□□□□ -0.74
NEDD9-203ENST00000397378 NUP205Q92621 2012 aa10.43□□□□□ -0.74
NEDD9-203ENST00000397378 A0A1B0GUA9 196 aa10.42□□□□□ -0.74
NEDD9-203ENST00000397378 BCLAF3A2AJT9 711 aaKnown RBP10.42□□□□□ -0.74
NEDD9-203ENST00000397378 WDR27A2RRH5 827 aa10.42□□□□□ -0.74
NEDD9-203ENST00000397378 SPECC1L-ADORA2AF8WAN1 911 aa10.42□□□□□ -0.74
NEDD9-203ENST00000397378 TBX3O15119 743 aa10.42□□□□□ -0.74
NEDD9-203ENST00000397378 CAPNS1P04632 268 aa10.42□□□□□ -0.74
NEDD9-203ENST00000397378 GCFC2P16383 781 aaKnown RBP10.42□□□□□ -0.74
NEDD9-203ENST00000397378 PDIA3P30101 505 aaKnown RBP10.42□□□□□ -0.74
NEDD9-203ENST00000397378 GBP1P32455 592 aa10.42□□□□□ -0.74
NEDD9-203ENST00000397378 VIPR2P41587 438 aa10.42□□□□□ -0.74
NEDD9-203ENST00000397378 MLLT6P55198 1093 aaPredicted RBP10.42□□□□□ -0.74
NEDD9-203ENST00000397378 CAPSQ13938 189 aa10.42□□□□□ -0.74
NEDD9-203ENST00000397378 RAB33AQ14088 237 aa10.42□□□□□ -0.74
NEDD9-203ENST00000397378 PON2Q15165 354 aa10.42□□□□□ -0.74
NEDD9-203ENST00000397378 INF2Q27J81 1249 aa10.42□□□□□ -0.74
NEDD9-203ENST00000397378 PRSS36Q5K4E3 855 aa10.42□□□□□ -0.74
NEDD9-203ENST00000397378 TXNDC11Q6PKC3 985 aa10.42□□□□□ -0.74
NEDD9-203ENST00000397378 PDZD4Q76G19 769 aaPredicted RBP10.42□□□□□ -0.74
NEDD9-203ENST00000397378 KRT25Q7Z3Z0 450 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms