RNA–Protein interactions for RNA: ENST00000397343.2

PGAM1P4-201, Transcript of phosphoglycerate mutase 1 pseudogene 4, humanhuman

BASIC

Gene PGAM1P4, Length 750 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAM1P4-201ENST00000397343 VPS16Q9H269 839 aa13.42□□□□□ -0.26
PGAM1P4-201ENST00000397343 HSD3B7Q9H2F3 369 aa13.42□□□□□ -0.26
PGAM1P4-201ENST00000397343 MMRN2Q9H8L6 949 aa13.42□□□□□ -0.26
PGAM1P4-201ENST00000397343 RNF19AQ9NV58 838 aa13.42□□□□□ -0.26
PGAM1P4-201ENST00000397343 DPP3Q9NY33 737 aa13.42□□□□□ -0.26
PGAM1P4-201ENST00000397343 ITGA11Q9UKX5 1188 aa13.42□□□□□ -0.26
PGAM1P4-201ENST00000397343 MYO9BQ13459 2157 aa13.41□□□□□ -0.26
PGAM1P4-201ENST00000397343 TLL1O43897 1013 aa13.41□□□□□ -0.26
PGAM1P4-201ENST00000397343 ALDH2P05091 517 aa13.41□□□□□ -0.26
PGAM1P4-201ENST00000397343 PAX3P23760 479 aa13.41□□□□□ -0.26
PGAM1P4-201ENST00000397343 UBASH3AP57075 661 aa13.41□□□□□ -0.26
PGAM1P4-201ENST00000397343 PPP3CAQ08209 521 aa13.41□□□□□ -0.26
PGAM1P4-201ENST00000397343 C9orf50Q5SZB4 431 aa13.41□□□□□ -0.26
PGAM1P4-201ENST00000397343 SPOUT1Q5T280 376 aaKnown RBP13.41□□□□□ -0.26
PGAM1P4-201ENST00000397343 LMBRD2Q68DH5 695 aaPredicted RBP13.41□□□□□ -0.26
PGAM1P4-201ENST00000397343 SV2AQ7L0J3 742 aa13.41□□□□□ -0.26
PGAM1P4-201ENST00000397343 EFCAB13Q8IY85 973 aa13.41□□□□□ -0.26
PGAM1P4-201ENST00000397343 GSTCDQ8NEC7 633 aa13.41□□□□□ -0.26
PGAM1P4-201ENST00000397343 ZNF689Q96CS4 500 aaPredicted RBP13.41□□□□□ -0.26
PGAM1P4-201ENST00000397343 ZMAT2Q96NC0 199 aaKnown RBP13.41□□□□□ -0.26
PGAM1P4-201ENST00000397343 IMPG2Q9BZV3 1241 aa13.41□□□□□ -0.26
PGAM1P4-201ENST00000397343 TBC1D13Q9NVG8 400 aa13.41□□□□□ -0.26
PGAM1P4-201ENST00000397343 MIOSQ9NXC5 875 aa13.41□□□□□ -0.26
PGAM1P4-201ENST00000397343 TET1Q8NFU7 2136 aa13.4□□□□□ -0.26
PGAM1P4-201ENST00000397343 CHD9Q3L8U1 2897 aa13.4□□□□□ -0.26
PGAM1P4-201ENST00000397343 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.4□□□□□ -0.26
PGAM1P4-201ENST00000397343 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.4□□□□□ -0.26
PGAM1P4-201ENST00000397343 GTPBP10A4D1E9 387 aaKnown RBP13.4□□□□□ -0.26
PGAM1P4-201ENST00000397343 LGALS16A8MUM7 142 aa13.4□□□□□ -0.26
PGAM1P4-201ENST00000397343 MEFVO15553 781 aaPredicted RBP13.4□□□□□ -0.26
PGAM1P4-201ENST00000397343 CLSTN1O94985 981 aa13.4□□□□□ -0.26
PGAM1P4-201ENST00000397343 C4BPAP04003 597 aaKnown RBP13.4□□□□□ -0.26
PGAM1P4-201ENST00000397343 KRT19P08727 400 aa13.4□□□□□ -0.26
PGAM1P4-201ENST00000397343 ATICP31939 592 aa13.4□□□□□ -0.26
PGAM1P4-201ENST00000397343 PNPLA4P41247 253 aa13.4□□□□□ -0.26
PGAM1P4-201ENST00000397343 WNT7BP56706 349 aa13.4□□□□□ -0.26
PGAM1P4-201ENST00000397343 MYL7Q01449 175 aa13.4□□□□□ -0.26
PGAM1P4-201ENST00000397343 UBXN1Q04323 297 aa13.4□□□□□ -0.26
PGAM1P4-201ENST00000397343 MYO1EQ12965 1108 aa13.4□□□□□ -0.26
PGAM1P4-201ENST00000397343 ZACNQ401N2 412 aa13.4□□□□□ -0.26
PGAM1P4-201ENST00000397343 PAN2Q504Q3 1202 aaKnown RBP13.4□□□□□ -0.26
PGAM1P4-201ENST00000397343 WDR44Q5JSH3 913 aa13.4□□□□□ -0.26
PGAM1P4-201ENST00000397343 C1orf220Q5T0J3 134 aa13.4□□□□□ -0.26
PGAM1P4-201ENST00000397343 GPR153Q6NV75 609 aa13.4□□□□□ -0.26
PGAM1P4-201ENST00000397343 GBP6Q6ZN66 633 aa13.4□□□□□ -0.26
PGAM1P4-201ENST00000397343 FIBCD1Q8N539 461 aa13.4□□□□□ -0.26
PGAM1P4-201ENST00000397343 FBXL13Q8NEE6 735 aa13.4□□□□□ -0.26
PGAM1P4-201ENST00000397343 OR5B17Q8NGF7 314 aa13.4□□□□□ -0.26
PGAM1P4-201ENST00000397343 ZNF516Q92618 1163 aa13.4□□□□□ -0.26
PGAM1P4-201ENST00000397343 TMEM175Q9BSA9 504 aa13.4□□□□□ -0.26
PGAM1P4-201ENST00000397343 MTMR12Q9C0I1 747 aa13.4□□□□□ -0.26
PGAM1P4-201ENST00000397343 AAASQ9NRG9 546 aa13.4□□□□□ -0.26
PGAM1P4-201ENST00000397343 SCN5AQ14524 2016 aa13.4□□□□□ -0.26
PGAM1P4-201ENST00000397343 A0A1B0GTH6 734 aa13.39□□□□□ -0.27
PGAM1P4-201ENST00000397343 RBAK-RBAKDNI3L0D1 243 aa13.39□□□□□ -0.27
PGAM1P4-201ENST00000397343 LRPAP1P30533 357 aa13.39□□□□□ -0.27
PGAM1P4-201ENST00000397343 PIK3CAP42336 1068 aa13.39□□□□□ -0.27
PGAM1P4-201ENST00000397343 ALDH7A1P49419 539 aaKnown RBP13.39□□□□□ -0.27
PGAM1P4-201ENST00000397343 GATMP50440 423 aa13.39□□□□□ -0.27
PGAM1P4-201ENST00000397343 AFF1P51825 1210 aaKnown RBP13.39□□□□□ -0.27
PGAM1P4-201ENST00000397343 HTRA4P83105 476 aaPredicted RBP13.39□□□□□ -0.27
PGAM1P4-201ENST00000397343 DSC1Q08554 894 aa13.39□□□□□ -0.27
PGAM1P4-201ENST00000397343 NCOA4Q13772 614 aa13.39□□□□□ -0.27
PGAM1P4-201ENST00000397343 GSE1Q14687 1217 aa13.39□□□□□ -0.27
PGAM1P4-201ENST00000397343 EXOC3L4Q17RC7 722 aa13.39□□□□□ -0.27
PGAM1P4-201ENST00000397343 SGSM1Q2NKQ1 1148 aa13.39□□□□□ -0.27
PGAM1P4-201ENST00000397343 MIIPQ5JXC2 388 aa13.39□□□□□ -0.27
PGAM1P4-201ENST00000397343 DCLRE1AQ6PJP8 1040 aa13.39□□□□□ -0.27
PGAM1P4-201ENST00000397343 SARM1Q6SZW1 724 aa13.39□□□□□ -0.27
PGAM1P4-201ENST00000397343 C15orf39Q6ZRI6 1047 aa13.39□□□□□ -0.27
PGAM1P4-201ENST00000397343 C1orf127Q8N9H9 656 aa13.39□□□□□ -0.27
PGAM1P4-201ENST00000397343 TAF4BQ92750 862 aa13.39□□□□□ -0.27
PGAM1P4-201ENST00000397343 C18orf25Q96B23 403 aaPredicted RBP13.39□□□□□ -0.27
PGAM1P4-201ENST00000397343 ZNF560Q96MR9 790 aa13.39□□□□□ -0.27
PGAM1P4-201ENST00000397343 COLEC11Q9BWP8 271 aa13.39□□□□□ -0.27
PGAM1P4-201ENST00000397343 TRIM5Q9C035 493 aa13.39□□□□□ -0.27
PGAM1P4-201ENST00000397343 CXCL16Q9H2A7 254 aa13.39□□□□□ -0.27
PGAM1P4-201ENST00000397343 RTN4Q9NQC3 1192 aaKnown RBP13.39□□□□□ -0.27
PGAM1P4-201ENST00000397343 RAB20Q9NX57 234 aa13.39□□□□□ -0.27
PGAM1P4-201ENST00000397343 TUBGCP4Q9UGJ1 667 aa13.39□□□□□ -0.27
PGAM1P4-201ENST00000397343 PLAGL2Q9UPG8 496 aa13.39□□□□□ -0.27
PGAM1P4-201ENST00000397343 AGAP1Q9UPQ3 857 aa13.39□□□□□ -0.27
PGAM1P4-201ENST00000397343 FAN1Q9Y2M0 1017 aa13.39□□□□□ -0.27
PGAM1P4-201ENST00000397343 COQ4Q9Y3A0 265 aa13.39□□□□□ -0.27
PGAM1P4-201ENST00000397343 TTC3P53804 2025 aa13.39□□□□□ -0.27
PGAM1P4-201ENST00000397343 ARHGEF37A1IGU5 675 aa13.38□□□□□ -0.27
PGAM1P4-201ENST00000397343 PODXLO00592 558 aa13.38□□□□□ -0.27
PGAM1P4-201ENST00000397343 ZC3H11AO75152 810 aaKnown RBP eCLIP13.38□□□□□ -0.27
PGAM1P4-201ENST00000397343 HLA-DRAP01903 254 aa13.38□□□□□ -0.27
PGAM1P4-201ENST00000397343 ITGB3P05106 788 aa13.38□□□□□ -0.27
PGAM1P4-201ENST00000397343 P4HA1P13674 534 aa13.38□□□□□ -0.27
PGAM1P4-201ENST00000397343 LAG3P18627 525 aa13.38□□□□□ -0.27
PGAM1P4-201ENST00000397343 POLR2BP30876 1174 aaKnown RBP13.38□□□□□ -0.27
PGAM1P4-201ENST00000397343 OR1G1P47890 313 aa13.38□□□□□ -0.27
PGAM1P4-201ENST00000397343 CBWD6Q4V339 395 aa13.38□□□□□ -0.27
PGAM1P4-201ENST00000397343 CBWD3Q5JTY5 395 aa13.38□□□□□ -0.27
PGAM1P4-201ENST00000397343 CBWD5Q5RIA9 395 aa13.38□□□□□ -0.27
PGAM1P4-201ENST00000397343 TDRD10Q5VZ19 366 aaKnown RBP13.38□□□□□ -0.27
PGAM1P4-201ENST00000397343 C9orf57Q5W0N0 161 aa13.38□□□□□ -0.27
PGAM1P4-201ENST00000397343 TMCO2Q7Z6W1 182 aaPredicted RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms