RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 FGF13Q92913 245 aa15□□□□□ -0.01
SEC13-205ENST00000397101 CCDC34Q96HJ3 373 aa15□□□□□ -0.01
SEC13-205ENST00000397101 ZFP42Q96MM3 310 aa15□□□□□ -0.01
SEC13-205ENST00000397101 PRMT8Q9NR22 394 aaPredicted RBP15□□□□□ -0.01
SEC13-205ENST00000397101 RGL1Q9NZL6 768 aa15□□□□□ -0.01
SEC13-205ENST00000397101 CDV3Q9UKY7 258 aaKnown RBP15□□□□□ -0.01
SEC13-205ENST00000397101 SMG5Q9UPR3 1016 aaKnown RBP15□□□□□ -0.01
SEC13-205ENST00000397101 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.99□□□□□ -0.01
SEC13-205ENST00000397101 TRAK2O60296 914 aa14.99□□□□□ -0.01
SEC13-205ENST00000397101 XYLBO75191 536 aa14.99□□□□□ -0.01
SEC13-205ENST00000397101 MED24O75448 989 aa14.99□□□□□ -0.01
SEC13-205ENST00000397101 ZNF202O95125 648 aa14.99□□□□□ -0.01
SEC13-205ENST00000397101 YWHABP31946 246 aaKnown RBP14.99□□□□□ -0.01
SEC13-205ENST00000397101 CSTF1Q05048 431 aaKnown RBP14.99□□□□□ -0.01
SEC13-205ENST00000397101 UBXN2BQ14CS0 331 aa14.99□□□□□ -0.01
SEC13-205ENST00000397101 EMC2Q15006 297 aa14.99□□□□□ -0.01
SEC13-205ENST00000397101 AMHR2Q16671 573 aa14.99□□□□□ -0.01
SEC13-205ENST00000397101 PDXDC1Q6P996 788 aa14.99□□□□□ -0.01
SEC13-205ENST00000397101 GPT2Q8TD30 523 aa14.99□□□□□ -0.01
SEC13-205ENST00000397101 PIK3R5Q8WYR1 880 aa14.99□□□□□ -0.01
SEC13-205ENST00000397101 CCDC43Q96MW1 224 aaKnown RBP14.99□□□□□ -0.01
SEC13-205ENST00000397101 IER2Q9BTL4 223 aa14.99□□□□□ -0.01
SEC13-205ENST00000397101 MMTAG2Q9BU76 263 aaKnown RBP14.99□□□□□ -0.01
SEC13-205ENST00000397101 POLR3CQ9BUI4 534 aaPredicted RBP14.99□□□□□ -0.01
SEC13-205ENST00000397101 TUFT1Q9NNX1 390 aa14.99□□□□□ -0.01
SEC13-205ENST00000397101 DDX19AQ9NUU7 478 aaKnown RBP14.99□□□□□ -0.01
SEC13-205ENST00000397101 WRAP73Q9P2S5 460 aaPredicted RBP14.99□□□□□ -0.01
SEC13-205ENST00000397101 KIAA1024Q9UPX6 916 aa14.99□□□□□ -0.01
SEC13-205ENST00000397101 MTF2Q9Y483 593 aaPredicted RBP14.99□□□□□ -0.01
SEC13-205ENST00000397101 PATJQ8NI35 1801 aa14.99□□□□□ -0.01
SEC13-205ENST00000397101 SLC26A4O43511 780 aa14.98□□□□□ -0.01
SEC13-205ENST00000397101 TADA2AO75478 443 aa14.98□□□□□ -0.01
SEC13-205ENST00000397101 C8AP07357 584 aa14.98□□□□□ -0.01
SEC13-205ENST00000397101 ADRB1P08588 477 aa14.98□□□□□ -0.01
SEC13-205ENST00000397101 PLCG1P19174 1290 aa14.98□□□□□ -0.01
SEC13-205ENST00000397101 RPA1P27694 616 aa14.98□□□□□ -0.01
SEC13-205ENST00000397101 TFDP1Q14186 410 aa14.98□□□□□ -0.01
SEC13-205ENST00000397101 DHX8Q14562 1220 aaKnown RBP14.98□□□□□ -0.01
SEC13-205ENST00000397101 RTP2Q5QGT7 225 aa14.98□□□□□ -0.01
SEC13-205ENST00000397101 PPM1LQ5SGD2 360 aa14.98□□□□□ -0.01
SEC13-205ENST00000397101 CATSPER3Q86XQ3 398 aa14.98□□□□□ -0.01
SEC13-205ENST00000397101 LNX1Q8TBB1 728 aaPredicted RBP14.98□□□□□ -0.01
SEC13-205ENST00000397101 SYAP1Q96A49 352 aaPredicted RBP14.98□□□□□ -0.01
SEC13-205ENST00000397101 B3GALT6Q96L58 329 aa14.98□□□□□ -0.01
SEC13-205ENST00000397101 MTRQ99707 1265 aa14.98□□□□□ -0.01
SEC13-205ENST00000397101 CLSTN3Q9BQT9 956 aa14.98□□□□□ -0.01
SEC13-205ENST00000397101 LXNQ9BS40 222 aa14.98□□□□□ -0.01
SEC13-205ENST00000397101 TTPALQ9BTX7 342 aa14.98□□□□□ -0.01
SEC13-205ENST00000397101 TRIM6Q9C030 488 aaPredicted RBP14.98□□□□□ -0.01
SEC13-205ENST00000397101 ZSWIM4Q9H7M6 989 aa14.98□□□□□ -0.01
SEC13-205ENST00000397101 SERTAD1Q9UHV2 236 aa14.98□□□□□ -0.01
SEC13-205ENST00000397101 DNM3Q9UQ16 869 aa14.98□□□□□ -0.01
SEC13-205ENST00000397101 HPSEQ9Y251 543 aa14.98□□□□□ -0.01
SEC13-205ENST00000397101 MRPS17Q9Y2R5 130 aaKnown RBP14.98□□□□□ -0.01
SEC13-205ENST00000397101 HES2Q9Y543 173 aa14.98□□□□□ -0.01
SEC13-205ENST00000397101 LRP3O75074 770 aa14.97□□□□□ -0.01
SEC13-205ENST00000397101 ECI2O75521 394 aa14.97□□□□□ -0.01
SEC13-205ENST00000397101 SLITRK3O94933 977 aa14.97□□□□□ -0.01
SEC13-205ENST00000397101 ARF4P18085 180 aaPredicted RBP14.97□□□□□ -0.01
SEC13-205ENST00000397101 RPL17P18621 184 aaKnown RBP14.97□□□□□ -0.01
SEC13-205ENST00000397101 TARSP26639 723 aaKnown RBP14.97□□□□□ -0.01
SEC13-205ENST00000397101 MBTD1Q05BQ5 628 aa14.97□□□□□ -0.01
SEC13-205ENST00000397101 ELAVL2Q12926 359 aaKnown RBP14.97□□□□□ -0.01
SEC13-205ENST00000397101 TUSC3Q13454 348 aa14.97□□□□□ -0.01
SEC13-205ENST00000397101 HSP90AA2PQ14568 343 aaPredicted RBP14.97□□□□□ -0.01
SEC13-205ENST00000397101 GLYCTKQ8IVS8 523 aa14.97□□□□□ -0.01
SEC13-205ENST00000397101 FMR1NBQ8N0W7 255 aaPredicted RBP14.97□□□□□ -0.01
SEC13-205ENST00000397101 CPB2Q96IY4 423 aa14.97□□□□□ -0.01
SEC13-205ENST00000397101 PNMA5Q96PV4 448 aa14.97□□□□□ -0.01
SEC13-205ENST00000397101 NXF3Q9H4D5 531 aaKnown RBP14.97□□□□□ -0.01
SEC13-205ENST00000397101 AVENQ9NQS1 362 aaPredicted RBP14.97□□□□□ -0.01
SEC13-205ENST00000397101 GDE1Q9NZC3 331 aa14.97□□□□□ -0.01
SEC13-205ENST00000397101 USP25Q9UHP3 1055 aa14.97□□□□□ -0.01
SEC13-205ENST00000397101 HOOK1Q9UJC3 728 aaKnown RBP14.97□□□□□ -0.01
SEC13-205ENST00000397101 GMEB2Q9UKD1 530 aa14.97□□□□□ -0.01
SEC13-205ENST00000397101 TDRD15B5MCY1 1934 aaKnown RBP14.97□□□□□ -0.01
SEC13-205ENST00000397101 A0A087WWV3 80 aa14.96□□□□□ -0.01
SEC13-205ENST00000397101 A0A087X0B3 334 aa14.96□□□□□ -0.01
SEC13-205ENST00000397101 FAM237AA0A1B0GTK4 181 aa14.96□□□□□ -0.01
SEC13-205ENST00000397101 A0A1B0GUA9 196 aa14.96□□□□□ -0.01
SEC13-205ENST00000397101 E9PMD0 336 aa14.96□□□□□ -0.01
SEC13-205ENST00000397101 INO80B-WBP1J3KQ70 363 aa14.96□□□□□ -0.01
SEC13-205ENST00000397101 SPATA31C1P0DKV0 1188 aa14.96□□□□□ -0.01
SEC13-205ENST00000397101 MUTP22033 750 aa14.96□□□□□ -0.01
SEC13-205ENST00000397101 NRLP54845 237 aa14.96□□□□□ -0.01
SEC13-205ENST00000397101 NTHL1P78549 312 aa14.96□□□□□ -0.01
SEC13-205ENST00000397101 ADCY1Q08828 1119 aa14.96□□□□□ -0.01
SEC13-205ENST00000397101 FZD5Q13467 585 aa14.96□□□□□ -0.01
SEC13-205ENST00000397101 RAB33AQ14088 237 aa14.96□□□□□ -0.01
SEC13-205ENST00000397101 PSMD5Q16401 504 aa14.96□□□□□ -0.01
SEC13-205ENST00000397101 KLHL40Q2TBA0 621 aa14.96□□□□□ -0.01
SEC13-205ENST00000397101 CAVIN1Q6NZI2 390 aaKnown RBP14.96□□□□□ -0.01
SEC13-205ENST00000397101 SLC27A1Q6PCB7 646 aa14.96□□□□□ -0.01
SEC13-205ENST00000397101 PRSS55Q6UWB4 352 aaPredicted RBP14.96□□□□□ -0.01
SEC13-205ENST00000397101 ZNF852Q6ZMS4 543 aa14.96□□□□□ -0.01
SEC13-205ENST00000397101 NPAS3Q8IXF0 933 aa14.96□□□□□ -0.01
SEC13-205ENST00000397101 ENGASEQ8NFI3 743 aa14.96□□□□□ -0.01
SEC13-205ENST00000397101 ITFG1Q8TB96 612 aa14.96□□□□□ -0.01
SEC13-205ENST00000397101 DNASE1L2Q92874 299 aa14.96□□□□□ -0.01
SEC13-205ENST00000397101 NACC1Q96RE7 527 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms