RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 FAM124BQ9H5Z6 455 aaPredicted RBP11.5□□□□□ -0.57
NUP98-205ENST00000397007 ANO10Q9NW15 660 aa11.5□□□□□ -0.57
NUP98-205ENST00000397007 RBAKQ9NYW8 714 aaPredicted RBP11.5□□□□□ -0.57
NUP98-205ENST00000397007 ANKFY1Q9P2R3 1169 aa11.5□□□□□ -0.57
NUP98-205ENST00000397007 COL6A3P12111 3177 aa11.5□□□□□ -0.57
NUP98-205ENST00000397007 ARID5BQ14865 1188 aa11.5□□□□□ -0.57
NUP98-205ENST00000397007 INTS8Q75QN2 995 aaKnown RBP11.5□□□□□ -0.57
NUP98-205ENST00000397007 LRRC52Q8N7C0 313 aa11.5□□□□□ -0.57
NUP98-205ENST00000397007 NOC3LQ8WTT2 800 aaKnown RBP11.5□□□□□ -0.57
NUP98-205ENST00000397007 NAA15Q9BXJ9 866 aaKnown RBP11.5□□□□□ -0.57
NUP98-205ENST00000397007 ZBP1Q9H171 429 aa11.5□□□□□ -0.57
NUP98-205ENST00000397007 ZNF233A6NK53 670 aa11.49□□□□□ -0.57
NUP98-205ENST00000397007 GABRDO14764 452 aa11.49□□□□□ -0.57
NUP98-205ENST00000397007 RB1P06400 928 aa11.49□□□□□ -0.57
NUP98-205ENST00000397007 PSMC2P35998 433 aaKnown RBP11.49□□□□□ -0.57
NUP98-205ENST00000397007 ADAM9Q13443 819 aa11.49□□□□□ -0.57
NUP98-205ENST00000397007 RAB30Q15771 203 aa11.49□□□□□ -0.57
NUP98-205ENST00000397007 CBWD6Q4V339 395 aa11.49□□□□□ -0.57
NUP98-205ENST00000397007 CBWD3Q5JTY5 395 aa11.49□□□□□ -0.57
NUP98-205ENST00000397007 CBWD5Q5RIA9 395 aa11.49□□□□□ -0.57
NUP98-205ENST00000397007 DDX53Q86TM3 631 aaKnown RBP11.49□□□□□ -0.57
NUP98-205ENST00000397007 PCIF1Q9H4Z3 704 aa11.49□□□□□ -0.57
NUP98-205ENST00000397007 ITGA11Q9UKX5 1188 aa11.49□□□□□ -0.57
NUP98-205ENST00000397007 MYO16Q9Y6X6 1858 aa11.49□□□□□ -0.57
NUP98-205ENST00000397007 SYCE3A1L190 88 aa11.49□□□□□ -0.57
NUP98-205ENST00000397007 P4HA2O15460 535 aa11.49□□□□□ -0.57
NUP98-205ENST00000397007 VNN2O95498 520 aa11.49□□□□□ -0.57
NUP98-205ENST00000397007 BMPR1AP36894 532 aa11.49□□□□□ -0.57
NUP98-205ENST00000397007 AP3M2P53677 418 aa11.49□□□□□ -0.57
NUP98-205ENST00000397007 BCAR1P56945 870 aa11.49□□□□□ -0.57
NUP98-205ENST00000397007 NCBP1Q09161 790 aaKnown RBP11.49□□□□□ -0.57
NUP98-205ENST00000397007 SURF1Q15526 300 aa11.49□□□□□ -0.57
NUP98-205ENST00000397007 KIAA0319Q5VV43 1072 aa11.49□□□□□ -0.57
NUP98-205ENST00000397007 ISM2Q6H9L7 571 aa11.49□□□□□ -0.57
NUP98-205ENST00000397007 GAS2L3Q86XJ1 694 aa11.49□□□□□ -0.57
NUP98-205ENST00000397007 CCDC94Q9BW85 323 aaPredicted RBP11.49□□□□□ -0.57
NUP98-205ENST00000397007 GPR88Q9GZN0 384 aa11.49□□□□□ -0.57
NUP98-205ENST00000397007 RXFP1Q9HBX9 757 aa11.49□□□□□ -0.57
NUP98-205ENST00000397007 PDE11AQ9HCR9 933 aa11.49□□□□□ -0.57
NUP98-205ENST00000397007 KIF4AO95239 1232 aa11.49□□□□□ -0.57
NUP98-205ENST00000397007 GNA14O95837 355 aa11.49□□□□□ -0.57
NUP98-205ENST00000397007 UBE3AQ05086 875 aa11.49□□□□□ -0.57
NUP98-205ENST00000397007 HSP90AA2PQ14568 343 aaPredicted RBP11.49□□□□□ -0.57
NUP98-205ENST00000397007 BEST2Q8NFU1 509 aa11.49□□□□□ -0.57
NUP98-205ENST00000397007 CCDC47Q96A33 483 aaKnown RBP11.49□□□□□ -0.57
NUP98-205ENST00000397007 IGSF21Q96ID5 467 aa11.49□□□□□ -0.57
NUP98-205ENST00000397007 RWDD3Q9Y3V2 267 aa11.49□□□□□ -0.57
NUP98-205ENST00000397007 NRP1O14786 923 aa11.48□□□□□ -0.57
NUP98-205ENST00000397007 CST3P01034 146 aaPredicted RBP11.48□□□□□ -0.57
NUP98-205ENST00000397007 DNAJB2P25686 324 aa11.48□□□□□ -0.57
NUP98-205ENST00000397007 CLCNKBP51801 687 aa11.48□□□□□ -0.57
NUP98-205ENST00000397007 ANO6Q4KMQ2 910 aa11.48□□□□□ -0.57
NUP98-205ENST00000397007 TCP11X2Q5H9J9 407 aa11.48□□□□□ -0.57
NUP98-205ENST00000397007 SPPL3Q8TCT6 385 aa11.48□□□□□ -0.57
NUP98-205ENST00000397007 KBTBD7Q8WVZ9 684 aa11.48□□□□□ -0.57
NUP98-205ENST00000397007 SEMA4DQ92854 862 aa11.48□□□□□ -0.57
NUP98-205ENST00000397007 ZHX3Q9H4I2 956 aa11.48□□□□□ -0.57
NUP98-205ENST00000397007 TOPORSQ9NS56 1045 aaPredicted RBP11.48□□□□□ -0.57
NUP98-205ENST00000397007 LMCD1Q9NZU5 365 aa11.48□□□□□ -0.57
NUP98-205ENST00000397007 UBQLN1Q9UMX0 589 aaKnown RBP11.48□□□□□ -0.57
NUP98-205ENST00000397007 AP5Z1O43299 807 aa11.48□□□□□ -0.57
NUP98-205ENST00000397007 THP07101 528 aa11.48□□□□□ -0.57
NUP98-205ENST00000397007 CA3P07451 260 aa11.48□□□□□ -0.57
NUP98-205ENST00000397007 PPP2R3AQ06190 1150 aa11.48□□□□□ -0.57
NUP98-205ENST00000397007 KCNMA1Q12791 1236 aa11.48□□□□□ -0.57
NUP98-205ENST00000397007 HABP4Q5JVS0 413 aaKnown RBP11.48□□□□□ -0.57
NUP98-205ENST00000397007 HS2ST1Q7LGA3 356 aa11.48□□□□□ -0.57
NUP98-205ENST00000397007 THNSL1Q8IYQ7 743 aa11.48□□□□□ -0.57
NUP98-205ENST00000397007 SYAP1Q96A49 352 aaPredicted RBP11.48□□□□□ -0.57
NUP98-205ENST00000397007 SUSD3Q96L08 255 aa11.48□□□□□ -0.57
NUP98-205ENST00000397007 POP1Q99575 1024 aaKnown RBP11.48□□□□□ -0.57
NUP98-205ENST00000397007 DNAJC25Q9H1X3 360 aa11.48□□□□□ -0.57
NUP98-205ENST00000397007 RPF1Q9H9Y2 349 aaKnown RBP11.48□□□□□ -0.57
NUP98-205ENST00000397007 CBX8Q9HC52 389 aa11.48□□□□□ -0.57
NUP98-205ENST00000397007 SAMSN1Q9NSI8 373 aaKnown RBP11.48□□□□□ -0.57
NUP98-205ENST00000397007 GOLGA8IPA6NC78 632 aa11.48□□□□□ -0.57
NUP98-205ENST00000397007 GOLGA8JA6NMD2 632 aa11.48□□□□□ -0.57
NUP98-205ENST00000397007 LRRN2O75325 713 aa11.48□□□□□ -0.57
NUP98-205ENST00000397007 ASS1P00966 412 aaKnown RBP11.48□□□□□ -0.57
NUP98-205ENST00000397007 LAG3P18627 525 aa11.48□□□□□ -0.57
NUP98-205ENST00000397007 EEF1GP26641 437 aaKnown RBP11.48□□□□□ -0.57
NUP98-205ENST00000397007 KCNJ6P48051 423 aa11.48□□□□□ -0.57
NUP98-205ENST00000397007 VAMP7P51809 220 aa11.48□□□□□ -0.57
NUP98-205ENST00000397007 SCLT1Q96NL6 688 aa11.48□□□□□ -0.57
NUP98-205ENST00000397007 C17orf80Q9BSJ5 609 aa11.48□□□□□ -0.57
NUP98-205ENST00000397007 TTYH3Q9C0H2 523 aa11.48□□□□□ -0.57
NUP98-205ENST00000397007 MTIF3Q9H2K0 278 aaKnown RBP11.48□□□□□ -0.57
NUP98-205ENST00000397007 APOBEC3GQ9HC16 384 aaKnown RBP11.48□□□□□ -0.57
NUP98-205ENST00000397007 TMEM8AQ9HCN3 771 aa11.48□□□□□ -0.57
NUP98-205ENST00000397007 SLC38A7Q9NVC3 462 aa11.48□□□□□ -0.57
NUP98-205ENST00000397007 KLK14Q9P0G3 267 aa11.48□□□□□ -0.57
NUP98-205ENST00000397007 CEP72Q9P209 647 aa11.48□□□□□ -0.57
NUP98-205ENST00000397007 KIAA1549LQ6ZVL6 1849 aa11.47□□□□□ -0.57
NUP98-205ENST00000397007 CAPN15O75808 1086 aa11.47□□□□□ -0.57
NUP98-205ENST00000397007 ASPAP45381 313 aa11.47□□□□□ -0.57
NUP98-205ENST00000397007 DCLRE1AQ6PJP8 1040 aa11.47□□□□□ -0.57
NUP98-205ENST00000397007 GLB1LQ6UWU2 654 aa11.47□□□□□ -0.57
NUP98-205ENST00000397007 FAM84AQ96KN4 292 aa11.47□□□□□ -0.57
NUP98-205ENST00000397007 GOLGA2P5Q9HBQ8 144 aa11.47□□□□□ -0.57
NUP98-205ENST00000397007 STK39Q9UEW8 545 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms