RNA–Protein interactions for RNA: ENST00000396364.7

FXN-202, Transcript of frataxin, humanhuman

TSL 5 BASIC

Gene FXN, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-202ENST00000396364 ITGA11Q9UKX5 1188 aa23.04■■□□□ 1.28
FXN-202ENST00000396364 CASTOR2A6NHX0 329 aa23.03■■□□□ 1.28
FXN-202ENST00000396364 GALTP07902 379 aa23.03■■□□□ 1.28
FXN-202ENST00000396364 TPM2P07951 284 aa23.03■■□□□ 1.28
FXN-202ENST00000396364 PRKCSHP14314 528 aaPredicted RBP23.03■■□□□ 1.28
FXN-202ENST00000396364 LRPAP1P30533 357 aa23.03■■□□□ 1.28
FXN-202ENST00000396364 GTF2H1P32780 548 aa23.03■■□□□ 1.28
FXN-202ENST00000396364 MARSP56192 900 aaKnown RBP23.03■■□□□ 1.28
FXN-202ENST00000396364 ERVK-21P61565 698 aa23.03■■□□□ 1.28
FXN-202ENST00000396364 CLDN10P78369 228 aa23.03■■□□□ 1.28
FXN-202ENST00000396364 TAP1Q03518 808 aa23.03■■□□□ 1.28
FXN-202ENST00000396364 NAB2Q15742 525 aa23.03■■□□□ 1.28
FXN-202ENST00000396364 DCAF17Q5H9S7 520 aaPredicted RBP23.03■■□□□ 1.28
FXN-202ENST00000396364 DCLRE1AQ6PJP8 1040 aa23.03■■□□□ 1.28
FXN-202ENST00000396364 CREBRFQ8IUR6 639 aa23.03■■□□□ 1.28
FXN-202ENST00000396364 EFCAB13Q8IY85 973 aa23.03■■□□□ 1.28
FXN-202ENST00000396364 TSPY26PQ9H489 355 aa23.03■■□□□ 1.28
FXN-202ENST00000396364 DNAJB4Q9UDY4 337 aa23.03■■□□□ 1.28
FXN-202ENST00000396364 KIAA1671Q9BY89 1806 aa23.03■■□□□ 1.28
FXN-202ENST00000396364 RANBP2P49792 3224 aaKnown RBP23.02■■□□□ 1.28
FXN-202ENST00000396364 NRP1O14786 923 aa23.02■■□□□ 1.28
FXN-202ENST00000396364 TRAPPC3O43617 180 aa23.02■■□□□ 1.28
FXN-202ENST00000396364 PHACTR2O75167 634 aa23.02■■□□□ 1.28
FXN-202ENST00000396364 PNPLA4P41247 253 aa23.02■■□□□ 1.28
FXN-202ENST00000396364 C18orf25Q96B23 403 aaPredicted RBP23.02■■□□□ 1.28
FXN-202ENST00000396364 CNOT6LQ96LI5 555 aaKnown RBP23.02■■□□□ 1.28
FXN-202ENST00000396364 ZNF560Q96MR9 790 aa23.02■■□□□ 1.28
FXN-202ENST00000396364 CXCL16Q9H2A7 254 aa23.02■■□□□ 1.28
FXN-202ENST00000396364 TUBGCP4Q9UGJ1 667 aa23.02■■□□□ 1.28
FXN-202ENST00000396364 PUF60Q9UHX1 559 aaKnown RBP23.02■■□□□ 1.28
FXN-202ENST00000396364 NUB1Q9Y5A7 615 aa23.02■■□□□ 1.28
FXN-202ENST00000396364 ARHGEF37A1IGU5 675 aa23.01■■□□□ 1.27
FXN-202ENST00000396364 LRRIQ3A6PVS8 624 aaPredicted RBP23.01■■□□□ 1.27
FXN-202ENST00000396364 C5orf67F2Z3F1 127 aa23.01■■□□□ 1.27
FXN-202ENST00000396364 PODXLO00592 558 aa23.01■■□□□ 1.27
FXN-202ENST00000396364 N4BP1O75113 896 aaKnown RBP23.01■■□□□ 1.27
FXN-202ENST00000396364 TADA2AO75478 443 aa23.01■■□□□ 1.27
FXN-202ENST00000396364 EEF1GP26641 437 aaKnown RBP23.01■■□□□ 1.27
FXN-202ENST00000396364 MTIF2P46199 727 aaKnown RBP23.01■■□□□ 1.27
FXN-202ENST00000396364 SLC11A1P49279 550 aa23.01■■□□□ 1.27
FXN-202ENST00000396364 CLCNKBP51801 687 aa23.01■■□□□ 1.27
FXN-202ENST00000396364 ZNF445P59923 1031 aa23.01■■□□□ 1.27
FXN-202ENST00000396364 RBP5P82980 135 aa23.01■■□□□ 1.27
FXN-202ENST00000396364 CETN1Q12798 172 aa23.01■■□□□ 1.27
FXN-202ENST00000396364 ELAVL2Q12926 359 aaKnown RBP23.01■■□□□ 1.27
FXN-202ENST00000396364 BIRC3Q13489 604 aa23.01■■□□□ 1.27
FXN-202ENST00000396364 BMS1Q14692 1282 aaKnown RBP23.01■■□□□ 1.27
FXN-202ENST00000396364 UPP1Q16831 310 aa23.01■■□□□ 1.27
FXN-202ENST00000396364 EPC2Q52LR7 807 aa23.01■■□□□ 1.27
FXN-202ENST00000396364 AOPEPQ8N6M6 819 aa23.01■■□□□ 1.27
FXN-202ENST00000396364 FBXO22Q8NEZ5 403 aa23.01■■□□□ 1.27
FXN-202ENST00000396364 BORCS6Q96GS4 357 aa23.01■■□□□ 1.27
FXN-202ENST00000396364 MTMR12Q9C0I1 747 aa23.01■■□□□ 1.27
FXN-202ENST00000396364 PRG3Q9Y2Y8 225 aaPredicted RBP23.01■■□□□ 1.27
FXN-202ENST00000396364 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.01■■□□□ 1.27
FXN-202ENST00000396364 GOLGA6L19H0YKK7 550 aa23■■□□□ 1.27
FXN-202ENST00000396364 TMEM189-UBE2V1I3L0A0 370 aa23■■□□□ 1.27
FXN-202ENST00000396364 B3GAT3O94766 335 aa23■■□□□ 1.27
FXN-202ENST00000396364 KRT19P08727 400 aa23■■□□□ 1.27
FXN-202ENST00000396364 SOX4Q06945 474 aaPredicted RBP23■■□□□ 1.27
FXN-202ENST00000396364 MYO1EQ12965 1108 aa23■■□□□ 1.27
FXN-202ENST00000396364 TRPC3Q13507 836 aa23■■□□□ 1.27
FXN-202ENST00000396364 ZNF697Q5TEC3 545 aa23■■□□□ 1.27
FXN-202ENST00000396364 SLC39A11Q8N1S5 342 aa23■■□□□ 1.27
FXN-202ENST00000396364 CCDC150Q8NCX0 1101 aa23■■□□□ 1.27
FXN-202ENST00000396364 MED15Q96RN5 788 aa23■■□□□ 1.27
FXN-202ENST00000396364 POP1Q99575 1024 aaKnown RBP23■■□□□ 1.27
FXN-202ENST00000396364 C17orf80Q9BSJ5 609 aa23■■□□□ 1.27
FXN-202ENST00000396364 GOLGA2P5Q9HBQ8 144 aa23■■□□□ 1.27
FXN-202ENST00000396364 HCSTQ9UBK5 93 aa23■■□□□ 1.27
FXN-202ENST00000396364 MTUS1Q9ULD2 1270 aa23■■□□□ 1.27
FXN-202ENST00000396364 ITGB3P05106 788 aa22.99■■□□□ 1.27
FXN-202ENST00000396364 CDK11BP21127 795 aaKnown RBP22.99■■□□□ 1.27
FXN-202ENST00000396364 WNT7BP56706 349 aa22.99■■□□□ 1.27
FXN-202ENST00000396364 MCCD1P59942 119 aaPredicted RBP22.99■■□□□ 1.27
FXN-202ENST00000396364 UBE3AQ05086 875 aa22.99■■□□□ 1.27
FXN-202ENST00000396364 HABP4Q5JVS0 413 aaKnown RBP22.99■■□□□ 1.27
FXN-202ENST00000396364 LMBRD2Q68DH5 695 aaPredicted RBP22.99■■□□□ 1.27
FXN-202ENST00000396364 KRT39Q6A163 491 aa22.99■■□□□ 1.27
FXN-202ENST00000396364 GPR153Q6NV75 609 aa22.99■■□□□ 1.27
FXN-202ENST00000396364 TRAPPC11Q7Z392 1133 aa22.99■■□□□ 1.27
FXN-202ENST00000396364 LRRC52Q8N7C0 313 aa22.99■■□□□ 1.27
FXN-202ENST00000396364 FAM200AQ8TCP9 573 aa22.99■■□□□ 1.27
FXN-202ENST00000396364 IGSF21Q96ID5 467 aa22.99■■□□□ 1.27
FXN-202ENST00000396364 IMPG2Q9BZV3 1241 aa22.99■■□□□ 1.27
FXN-202ENST00000396364 ZNF576Q9H609 170 aa22.99■■□□□ 1.27
FXN-202ENST00000396364 TMEM8AQ9HCN3 771 aa22.99■■□□□ 1.27
FXN-202ENST00000396364 ADAM28Q9UKQ2 775 aa22.99■■□□□ 1.27
FXN-202ENST00000396364 SF3B1O75533 1304 aaKnown RBP eCLIP22.99■■□□□ 1.271e-7■■■■■ 172.3
FXN-202ENST00000396364 TRIOBPQ9H2D6 2365 aa22.99■■□□□ 1.27
FXN-202ENST00000396364 KCNJ18B7U540 433 aa22.98■■□□□ 1.27
FXN-202ENST00000396364 FGF18O76093 207 aa22.98■■□□□ 1.27
FXN-202ENST00000396364 TRIM49P0CI25 452 aa22.98■■□□□ 1.27
FXN-202ENST00000396364 TRIM49CP0CI26 452 aa22.98■■□□□ 1.27
FXN-202ENST00000396364 MXI1P50539 228 aa22.98■■□□□ 1.27
FXN-202ENST00000396364 DLG4P78352 724 aa22.98■■□□□ 1.27
FXN-202ENST00000396364 PLCB3Q01970 1234 aa22.98■■□□□ 1.27
FXN-202ENST00000396364 KCNJ12Q14500 433 aa22.98■■□□□ 1.27
FXN-202ENST00000396364 SV2CQ496J9 727 aa22.98■■□□□ 1.27
FXN-202ENST00000396364 C9orf57Q5W0N0 161 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms