RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 ACAD10Q6JQN1 1059 aa13.01□□□□□ -0.33
ITGB1-202ENST00000396033 TMEM270Q6UE05 265 aa13.01□□□□□ -0.33
ITGB1-202ENST00000396033 ZNF677Q86XU0 584 aa13.01□□□□□ -0.33
ITGB1-202ENST00000396033 ZNF564Q8TBZ8 553 aaPredicted RBP13.01□□□□□ -0.33
ITGB1-202ENST00000396033 TMEM59LQ9UK28 342 aa13.01□□□□□ -0.33
ITGB1-202ENST00000396033 ALG6Q9Y672 507 aa13.01□□□□□ -0.33
ITGB1-202ENST00000396033 MAGEB2O15479 319 aa13□□□□□ -0.33
ITGB1-202ENST00000396033 HEXIM1O94992 359 aaKnown RBP13□□□□□ -0.33
ITGB1-202ENST00000396033 CYP1A2P05177 515 aa13□□□□□ -0.33
ITGB1-202ENST00000396033 ACO1P21399 889 aaKnown RBP13□□□□□ -0.33
ITGB1-202ENST00000396033 MESDQ14696 234 aa13□□□□□ -0.33
ITGB1-202ENST00000396033 SURF1Q15526 300 aa13□□□□□ -0.33
ITGB1-202ENST00000396033 EEF1DP3Q658K8 133 aa13□□□□□ -0.33
ITGB1-202ENST00000396033 RASGEF1CQ8N431 466 aa13□□□□□ -0.33
ITGB1-202ENST00000396033 GDAP1L1Q96MZ0 367 aa13□□□□□ -0.33
ITGB1-202ENST00000396033 TINF2Q9BSI4 451 aa13□□□□□ -0.33
ITGB1-202ENST00000396033 AP1M1Q9BXS5 423 aa13□□□□□ -0.33
ITGB1-202ENST00000396033 PLEKHA4Q9H4M7 779 aa13□□□□□ -0.33
ITGB1-202ENST00000396033 EVPLQ92817 2033 aa13□□□□□ -0.33
ITGB1-202ENST00000396033 SMPD1P17405 629 aa13□□□□□ -0.33
ITGB1-202ENST00000396033 GPS2Q13227 327 aa13□□□□□ -0.33
ITGB1-202ENST00000396033 OR6J1Q8NGC5 347 aa13□□□□□ -0.33
ITGB1-202ENST00000396033 PTPRHQ9HD43 1115 aa13□□□□□ -0.33
ITGB1-202ENST00000396033 PRMT7Q9NVM4 692 aaPredicted RBP13□□□□□ -0.33
ITGB1-202ENST00000396033 COL1A2P08123 1366 aa13□□□□□ -0.33
ITGB1-202ENST00000396033 KRIT1O00522 736 aa13□□□□□ -0.33
ITGB1-202ENST00000396033 MTA2O94776 668 aa13□□□□□ -0.33
ITGB1-202ENST00000396033 OAS2P29728 719 aaKnown RBP13□□□□□ -0.33
ITGB1-202ENST00000396033 TFAMQ00059 246 aaKnown RBP13□□□□□ -0.33
ITGB1-202ENST00000396033 DUOXA2Q1HG44 320 aa13□□□□□ -0.33
ITGB1-202ENST00000396033 C16orf70Q9BSU1 422 aa13□□□□□ -0.33
ITGB1-202ENST00000396033 NFKBIZQ9BYH8 718 aa13□□□□□ -0.33
ITGB1-202ENST00000396033 H3BRB1 525 aa12.99□□□□□ -0.33
ITGB1-202ENST00000396033 PPFIA4O75335 1185 aa12.99□□□□□ -0.33
ITGB1-202ENST00000396033 TMEM191BP0C7N4 346 aa12.99□□□□□ -0.33
ITGB1-202ENST00000396033 TMOD1P28289 359 aa12.99□□□□□ -0.33
ITGB1-202ENST00000396033 ACVR2BQ13705 512 aa12.99□□□□□ -0.33
ITGB1-202ENST00000396033 DUSP28Q4G0W2 176 aa12.99□□□□□ -0.33
ITGB1-202ENST00000396033 DCAF12L1Q5VU92 463 aa12.99□□□□□ -0.33
ITGB1-202ENST00000396033 CEP120Q8N960 986 aa12.99□□□□□ -0.33
ITGB1-202ENST00000396033 RBBP8NLQ8NC74 664 aaPredicted RBP12.99□□□□□ -0.33
ITGB1-202ENST00000396033 NPLOC4Q8TAT6 608 aa12.99□□□□□ -0.33
ITGB1-202ENST00000396033 CDT1Q9H211 546 aa12.99□□□□□ -0.33
ITGB1-202ENST00000396033 ABHD16BQ9H3Z7 469 aa12.99□□□□□ -0.33
ITGB1-202ENST00000396033 TUT1Q9H6E5 874 aaKnown RBP12.99□□□□□ -0.33
ITGB1-202ENST00000396033 IFT122Q9HBG6 1241 aa12.99□□□□□ -0.33
ITGB1-202ENST00000396033 UVRAGQ9P2Y5 699 aa12.99□□□□□ -0.33
ITGB1-202ENST00000396033 CNOT8Q9UFF9 292 aaKnown RBP12.99□□□□□ -0.33
ITGB1-202ENST00000396033 CPA4Q9UI42 421 aa12.99□□□□□ -0.33
ITGB1-202ENST00000396033 TNFSF13BQ9Y275 285 aa12.99□□□□□ -0.33
ITGB1-202ENST00000396033 A0A087WZ62 844 aa12.99□□□□□ -0.33
ITGB1-202ENST00000396033 VTNP04004 478 aa12.99□□□□□ -0.33
ITGB1-202ENST00000396033 IQCF3P0C7M6 154 aa12.99□□□□□ -0.33
ITGB1-202ENST00000396033 GNA15P30679 374 aa12.99□□□□□ -0.33
ITGB1-202ENST00000396033 HUNKP57058 714 aa12.99□□□□□ -0.33
ITGB1-202ENST00000396033 TRPC3Q13507 836 aa12.99□□□□□ -0.33
ITGB1-202ENST00000396033 SCARA3Q6AZY7 606 aa12.99□□□□□ -0.33
ITGB1-202ENST00000396033 IFT20Q8IY31 132 aa12.99□□□□□ -0.33
ITGB1-202ENST00000396033 AENQ8WTP8 325 aaKnown RBP12.99□□□□□ -0.33
ITGB1-202ENST00000396033 FDXACB1Q9BRP7 624 aaPredicted RBP12.99□□□□□ -0.33
ITGB1-202ENST00000396033 CARD9Q9H257 536 aa12.99□□□□□ -0.33
ITGB1-202ENST00000396033 ACBD3Q9H3P7 528 aa12.99□□□□□ -0.33
ITGB1-202ENST00000396033 MIF4GDA9UHW6 222 aaKnown RBP12.99□□□□□ -0.33
ITGB1-202ENST00000396033 RAD51CO43502 376 aa12.99□□□□□ -0.33
ITGB1-202ENST00000396033 CSDE1O75534 798 aaKnown RBP12.99□□□□□ -0.33
ITGB1-202ENST00000396033 ASS1P00966 412 aaKnown RBP12.99□□□□□ -0.33
ITGB1-202ENST00000396033 CST3P01034 146 aaPredicted RBP12.99□□□□□ -0.33
ITGB1-202ENST00000396033 FGGP02679 453 aa12.99□□□□□ -0.33
ITGB1-202ENST00000396033 GLI1P08151 1106 aa12.99□□□□□ -0.33
ITGB1-202ENST00000396033 MMP3P08254 477 aa12.99□□□□□ -0.33
ITGB1-202ENST00000396033 HOXC6P09630 235 aa12.99□□□□□ -0.33
ITGB1-202ENST00000396033 GUCY2DQ02846 1103 aa12.99□□□□□ -0.33
ITGB1-202ENST00000396033 PPFIA1Q13136 1202 aa12.99□□□□□ -0.33
ITGB1-202ENST00000396033 UBL4BQ8N7F7 174 aa12.99□□□□□ -0.33
ITGB1-202ENST00000396033 LINC01465Q8N7H1 131 aa12.99□□□□□ -0.33
ITGB1-202ENST00000396033 BTBD6Q96KE9 485 aa12.99□□□□□ -0.33
ITGB1-202ENST00000396033 SCLT1Q96NL6 688 aa12.99□□□□□ -0.33
ITGB1-202ENST00000396033 SLC15A5A6NIM6 579 aa12.98□□□□□ -0.33
ITGB1-202ENST00000396033 UNGP13051 313 aaPredicted RBP12.98□□□□□ -0.33
ITGB1-202ENST00000396033 COMTP21964 271 aa12.98□□□□□ -0.33
ITGB1-202ENST00000396033 TNFRSF8P28908 595 aa12.98□□□□□ -0.33
ITGB1-202ENST00000396033 MYL6P60660 151 aa12.98□□□□□ -0.33
ITGB1-202ENST00000396033 NAA35Q5VZE5 725 aa12.98□□□□□ -0.33
ITGB1-202ENST00000396033 MTHFD1LQ6UB35 978 aa12.98□□□□□ -0.33
ITGB1-202ENST00000396033 CPA5Q8WXQ8 436 aa12.98□□□□□ -0.33
ITGB1-202ENST00000396033 RNPC3Q96LT9 517 aaKnown RBP12.98□□□□□ -0.33
ITGB1-202ENST00000396033 EPB41L5Q9HCM4 733 aa12.98□□□□□ -0.33
ITGB1-202ENST00000396033 SLC5A4Q9NY91 659 aa12.98□□□□□ -0.33
ITGB1-202ENST00000396033 ZSWIM8A7E2V4 1837 aa12.98□□□□□ -0.33
ITGB1-202ENST00000396033 TNNC2P02585 160 aa12.98□□□□□ -0.33
ITGB1-202ENST00000396033 NSFP46459 744 aaKnown RBP12.98□□□□□ -0.33
ITGB1-202ENST00000396033 ZNF211Q13398 564 aaPredicted RBP12.98□□□□□ -0.33
ITGB1-202ENST00000396033 EFCAB13Q8IY85 973 aa12.98□□□□□ -0.33
ITGB1-202ENST00000396033 MSL3Q8N5Y2 521 aaKnown RBP12.98□□□□□ -0.33
ITGB1-202ENST00000396033 ANKRD36BP1Q96IX9 119 aa12.98□□□□□ -0.33
ITGB1-202ENST00000396033 RPF1Q9H9Y2 349 aaKnown RBP12.98□□□□□ -0.33
ITGB1-202ENST00000396033 RSPH14Q9UHP6 348 aa12.98□□□□□ -0.33
ITGB1-202ENST00000396033 ESYT3A0FGR9 886 aa12.98□□□□□ -0.33
ITGB1-202ENST00000396033 ZSCAN5CA6NGD5 496 aaPredicted RBP12.98□□□□□ -0.33
ITGB1-202ENST00000396033 CCDC188H7C350 402 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms