RNA–Protein interactions for RNA: ENST00000395906.7

CDRT1-204, CMT1A duplicated region transcript 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDRT1, Length 2,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-204ENST00000395906 RASSF3Q86WH2 238 aa10.25□□□□□ -0.77
CDRT1-204ENST00000395906 RHOT2Q8IXI1 618 aa10.25□□□□□ -0.77
CDRT1-204ENST00000395906 EPSTI1Q96J88 318 aa10.25□□□□□ -0.77
CDRT1-204ENST00000395906 GPATCH1Q9BRR8 931 aaKnown RBP10.25□□□□□ -0.77
CDRT1-204ENST00000395906 PLA2G12BQ9BX93 195 aa10.25□□□□□ -0.77
CDRT1-204ENST00000395906 OSBPL6Q9BZF3 934 aa10.25□□□□□ -0.77
CDRT1-204ENST00000395906 UNKQ9C0B0 810 aaKnown RBP10.25□□□□□ -0.77
CDRT1-204ENST00000395906 PFDN6O15212 129 aa10.25□□□□□ -0.77
CDRT1-204ENST00000395906 GYG2O15488 501 aa10.25□□□□□ -0.77
CDRT1-204ENST00000395906 XPOTO43592 962 aaKnown RBP10.25□□□□□ -0.77
CDRT1-204ENST00000395906 CHRNB1P11230 501 aa10.25□□□□□ -0.77
CDRT1-204ENST00000395906 ENPP1P22413 925 aa10.25□□□□□ -0.77
CDRT1-204ENST00000395906 HOXD13P35453 343 aa10.25□□□□□ -0.77
CDRT1-204ENST00000395906 PCYT1AP49585 367 aa10.25□□□□□ -0.77
CDRT1-204ENST00000395906 AP2B1P63010 937 aa10.25□□□□□ -0.77
CDRT1-204ENST00000395906 IGBP1P78318 339 aa10.25□□□□□ -0.77
CDRT1-204ENST00000395906 XIAPP98170 497 aa10.25□□□□□ -0.77
CDRT1-204ENST00000395906 KLRC3Q07444 240 aa10.25□□□□□ -0.77
CDRT1-204ENST00000395906 TRIM71Q2Q1W2 868 aaKnown RBP10.25□□□□□ -0.77
CDRT1-204ENST00000395906 SLC45A4Q5BKX6 768 aa10.25□□□□□ -0.77
CDRT1-204ENST00000395906 MAP3K21Q5TCX8 1036 aa10.25□□□□□ -0.77
CDRT1-204ENST00000395906 UGT2A3Q6UWM9 527 aa10.25□□□□□ -0.77
CDRT1-204ENST00000395906 PPP1R21Q6ZMI0 780 aa10.25□□□□□ -0.77
CDRT1-204ENST00000395906 DCDC5Q6ZRR9 648 aa10.25□□□□□ -0.77
CDRT1-204ENST00000395906 VPS52Q8N1B4 723 aa10.25□□□□□ -0.77
CDRT1-204ENST00000395906 ALLCQ8N6M5 410 aa10.25□□□□□ -0.77
CDRT1-204ENST00000395906 OR7G1Q8NGA0 311 aa10.25□□□□□ -0.77
CDRT1-204ENST00000395906 GABPB2Q8TAK5 448 aaPredicted RBP10.25□□□□□ -0.77
CDRT1-204ENST00000395906 PTCD2Q8WV60 388 aaKnown RBP10.25□□□□□ -0.77
CDRT1-204ENST00000395906 C2orf49Q9BVC5 232 aaPredicted RBP10.25□□□□□ -0.77
CDRT1-204ENST00000395906 MRPS26Q9BYN8 205 aaKnown RBP10.25□□□□□ -0.77
CDRT1-204ENST00000395906 MLXIPLQ9NP71 852 aa10.25□□□□□ -0.77
CDRT1-204ENST00000395906 PCDHB6Q9Y5E3 794 aa10.25□□□□□ -0.77
CDRT1-204ENST00000395906 AK5Q9Y6K8 562 aa10.25□□□□□ -0.77
CDRT1-204ENST00000395906 MYH4Q9Y623 1939 aa10.25□□□□□ -0.77
CDRT1-204ENST00000395906 PCNTO95613 3336 aa10.25□□□□□ -0.77
CDRT1-204ENST00000395906 TRIM49BA6NDI0 452 aa10.24□□□□□ -0.77
CDRT1-204ENST00000395906 BAIAP3O94812 1187 aa10.24□□□□□ -0.77
CDRT1-204ENST00000395906 LDHBP07195 334 aaKnown RBP10.24□□□□□ -0.77
CDRT1-204ENST00000395906 PHKA2P46019 1235 aa10.24□□□□□ -0.77
CDRT1-204ENST00000395906 PDAP1Q13442 181 aaKnown RBP10.24□□□□□ -0.77
CDRT1-204ENST00000395906 RASGRF1Q13972 1273 aa10.24□□□□□ -0.77
CDRT1-204ENST00000395906 PHKG1Q16816 387 aa10.24□□□□□ -0.77
CDRT1-204ENST00000395906 SLC27A3Q5K4L6 730 aa10.24□□□□□ -0.77
CDRT1-204ENST00000395906 SIGIRRQ6IA17 410 aa10.24□□□□□ -0.77
CDRT1-204ENST00000395906 TPTE2Q6XPS3 522 aa10.24□□□□□ -0.77
CDRT1-204ENST00000395906 SPATA5Q8NB90 893 aa10.24□□□□□ -0.77
CDRT1-204ENST00000395906 TRIM47Q96LD4 638 aa10.24□□□□□ -0.77
CDRT1-204ENST00000395906 BLZF1Q9H2G9 400 aa10.24□□□□□ -0.77
CDRT1-204ENST00000395906 TRNAU1APQ9NX07 287 aaKnown RBP10.24□□□□□ -0.77
CDRT1-204ENST00000395906 SLC30A1Q9Y6M5 507 aa10.24□□□□□ -0.77
CDRT1-204ENST00000395906 XDHP47989 1333 aa10.24□□□□□ -0.77
CDRT1-204ENST00000395906 ECM29Q5VYK3 1845 aa10.24□□□□□ -0.77
CDRT1-204ENST00000395906 TAF1LQ8IZX4 1826 aa10.24□□□□□ -0.77
CDRT1-204ENST00000395906 CFAP69A5D8W1 941 aa10.24□□□□□ -0.77
CDRT1-204ENST00000395906 MAGEB2O15479 319 aa10.24□□□□□ -0.77
CDRT1-204ENST00000395906 FUCA1P04066 466 aa10.24□□□□□ -0.77
CDRT1-204ENST00000395906 HSPD1P10809 573 aaKnown RBP10.24□□□□□ -0.77
CDRT1-204ENST00000395906 VCLP18206 1134 aa10.24□□□□□ -0.77
CDRT1-204ENST00000395906 PRKACBP22694 351 aa10.24□□□□□ -0.77
CDRT1-204ENST00000395906 PCNX4Q63HM2 1172 aa10.24□□□□□ -0.77
CDRT1-204ENST00000395906 DUPD1Q68J44 220 aa10.24□□□□□ -0.77
CDRT1-204ENST00000395906 METTL25Q8N6Q8 603 aa10.24□□□□□ -0.77
CDRT1-204ENST00000395906 SYMPKQ92797 1274 aaKnown RBP10.24□□□□□ -0.77
CDRT1-204ENST00000395906 UPF1Q92900 1129 aaKnown RBP eCLIP10.24□□□□□ -0.77
CDRT1-204ENST00000395906 CTRCQ99895 268 aa10.24□□□□□ -0.77
CDRT1-204ENST00000395906 CELF4Q9BZC1 486 aaKnown RBP10.24□□□□□ -0.77
CDRT1-204ENST00000395906 TRIM31Q9BZY9 425 aa10.24□□□□□ -0.77
CDRT1-204ENST00000395906 NKIRAS1Q9NYS0 192 aa10.24□□□□□ -0.77
CDRT1-204ENST00000395906 C6orf203Q9P0P8 240 aaPredicted RBP10.24□□□□□ -0.77
CDRT1-204ENST00000395906 IVNS1ABPQ9Y6Y0 642 aa10.24□□□□□ -0.77
CDRT1-204ENST00000395906 RPTORQ8N122 1335 aa10.24□□□□□ -0.77
CDRT1-204ENST00000395906 WDR19Q8NEZ3 1342 aa10.24□□□□□ -0.77
CDRT1-204ENST00000395906 BTBD18B2RXH4 712 aa10.23□□□□□ -0.77
CDRT1-204ENST00000395906 RNF113AO15541 343 aaKnown RBP10.23□□□□□ -0.77
CDRT1-204ENST00000395906 BUD23O43709 281 aaKnown RBP10.23□□□□□ -0.77
CDRT1-204ENST00000395906 GH1P01241 217 aa10.23□□□□□ -0.77
CDRT1-204ENST00000395906 RPN1P04843 607 aaKnown RBP10.23□□□□□ -0.77
CDRT1-204ENST00000395906 ESRRAP11474 423 aaPredicted RBP10.23□□□□□ -0.77
CDRT1-204ENST00000395906 HMOX2P30519 316 aa10.23□□□□□ -0.77
CDRT1-204ENST00000395906 ENTPD1P49961 510 aa10.23□□□□□ -0.77
CDRT1-204ENST00000395906 METAP2P50579 478 aaKnown RBP eCLIP10.23□□□□□ -0.77
CDRT1-204ENST00000395906 VCPP55072 806 aaKnown RBP10.23□□□□□ -0.77
CDRT1-204ENST00000395906 IL9RQ01113 521 aa10.23□□□□□ -0.77
CDRT1-204ENST00000395906 SPCS2Q15005 226 aa10.23□□□□□ -0.77
CDRT1-204ENST00000395906 ANKRD20A4Q4UJ75 823 aa10.23□□□□□ -0.77
CDRT1-204ENST00000395906 BOLA3Q53S33 107 aa10.23□□□□□ -0.77
CDRT1-204ENST00000395906 TMTC4Q5T4D3 741 aa10.23□□□□□ -0.77
CDRT1-204ENST00000395906 LMBRD2Q68DH5 695 aaPredicted RBP10.23□□□□□ -0.77
CDRT1-204ENST00000395906 FASTKD5Q7L8L6 764 aaKnown RBP10.23□□□□□ -0.77
CDRT1-204ENST00000395906 ANKMY2Q8IV38 441 aa10.23□□□□□ -0.77
CDRT1-204ENST00000395906 ZSCAN29Q8IWY8 852 aaPredicted RBP10.23□□□□□ -0.77
CDRT1-204ENST00000395906 MB21D2Q8IYB1 491 aaPredicted RBP10.23□□□□□ -0.77
CDRT1-204ENST00000395906 U2AF1L4Q8WU68 220 aaKnown RBP10.23□□□□□ -0.77
CDRT1-204ENST00000395906 ANKS1AQ92625 1134 aa10.23□□□□□ -0.77
CDRT1-204ENST00000395906 MED30Q96HR3 178 aa10.23□□□□□ -0.77
CDRT1-204ENST00000395906 SERPINB12Q96P63 405 aa10.23□□□□□ -0.77
CDRT1-204ENST00000395906 CRAMP1Q96RY5 1269 aa10.23□□□□□ -0.77
CDRT1-204ENST00000395906 TRIM51Q9BSJ1 452 aa10.23□□□□□ -0.77
CDRT1-204ENST00000395906 PLVAPQ9BX97 442 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms