RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 MED24O75448 989 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 ATF2P15336 505 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 CA4P22748 312 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 C1QBPQ07021 282 aaKnown RBP3.6□□□□□ -1.83
VPS13C-203ENST00000395896 ZACNQ401N2 412 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 FYB2Q5VWT5 728 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 EEPD1Q7L9B9 569 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 ATL2Q8NHH9 583 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 MAGEB5Q9BZ81 275 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 PYCARDQ9ULZ3 195 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 DLEC1Q9Y238 1755 aa3.59□□□□□ -1.83
VPS13C-203ENST00000395896 ARFGEF1Q9Y6D6 1849 aa3.59□□□□□ -1.83
VPS13C-203ENST00000395896 SPDYE4A6NLX3 237 aa3.59□□□□□ -1.83
VPS13C-203ENST00000395896 IRF6O14896 467 aa3.59□□□□□ -1.83
VPS13C-203ENST00000395896 TEX33O43247 280 aa3.59□□□□□ -1.83
VPS13C-203ENST00000395896 KRT38O76015 456 aa3.59□□□□□ -1.83
VPS13C-203ENST00000395896 DDNO94850 711 aaPredicted RBP3.59□□□□□ -1.83
VPS13C-203ENST00000395896 CYP2C9P11712 490 aa3.59□□□□□ -1.83
VPS13C-203ENST00000395896 RBM10P98175 930 aaKnown RBP3.59□□□□□ -1.83
VPS13C-203ENST00000395896 SPDYCQ5MJ68 293 aa3.59□□□□□ -1.83
VPS13C-203ENST00000395896 SMC1BQ8NDV3 1235 aa3.59□□□□□ -1.83
VPS13C-203ENST00000395896 FAM149B1Q96BN6 582 aa3.59□□□□□ -1.83
VPS13C-203ENST00000395896 RNPC3Q96LT9 517 aaKnown RBP3.59□□□□□ -1.83
VPS13C-203ENST00000395896 SYT17Q9BSW7 474 aa3.59□□□□□ -1.83
VPS13C-203ENST00000395896 ELP3Q9H9T3 547 aa3.59□□□□□ -1.83
VPS13C-203ENST00000395896 UNC13CQ8NB66 2214 aa3.59□□□□□ -1.83
VPS13C-203ENST00000395896 NPY5RQ15761 445 aa3.59□□□□□ -1.83
VPS13C-203ENST00000395896 FHDC1Q9C0D6 1143 aaPredicted RBP3.59□□□□□ -1.83
VPS13C-203ENST00000395896 DHX33Q9H6R0 707 aaKnown RBP3.59□□□□□ -1.83
VPS13C-203ENST00000395896 QSER1Q2KHR3 1735 aa3.59□□□□□ -1.83
VPS13C-203ENST00000395896 PAEPP09466 180 aa3.59□□□□□ -1.83
VPS13C-203ENST00000395896 KRT15P19012 456 aa3.59□□□□□ -1.83
VPS13C-203ENST00000395896 SLC12A2P55011 1212 aa3.59□□□□□ -1.83
VPS13C-203ENST00000395896 TFDP3Q5H9I0 405 aa3.59□□□□□ -1.83
VPS13C-203ENST00000395896 C4orf50Q6ZRC1 276 aa3.59□□□□□ -1.83
VPS13C-203ENST00000395896 OR6J1Q8NGC5 347 aa3.59□□□□□ -1.83
VPS13C-203ENST00000395896 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.59□□□□□ -1.83
VPS13C-203ENST00000395896 PPP1R12AO14974 1030 aaPredicted RBP3.59□□□□□ -1.83
VPS13C-203ENST00000395896 MCF2P10911 925 aa3.59□□□□□ -1.83
VPS13C-203ENST00000395896 CDK16Q00536 496 aa3.59□□□□□ -1.83
VPS13C-203ENST00000395896 TBX2Q13207 712 aaPredicted RBP3.59□□□□□ -1.83
VPS13C-203ENST00000395896 EFHBQ8N7U6 833 aa3.59□□□□□ -1.83
VPS13C-203ENST00000395896 ATRIPQ8WXE1 791 aa3.59□□□□□ -1.83
VPS13C-203ENST00000395896 KRT12Q99456 494 aa3.59□□□□□ -1.83
VPS13C-203ENST00000395896 AGPAT5Q9NUQ2 364 aa3.59□□□□□ -1.83
VPS13C-203ENST00000395896 FER1L6Q2WGJ9 1857 aa3.59□□□□□ -1.83
VPS13C-203ENST00000395896 SLC15A5A6NIM6 579 aa3.59□□□□□ -1.83
VPS13C-203ENST00000395896 NPTXRO95502 500 aa3.59□□□□□ -1.83
VPS13C-203ENST00000395896 PON1P27169 355 aa3.59□□□□□ -1.83
VPS13C-203ENST00000395896 LHX1P48742 406 aa3.59□□□□□ -1.83
VPS13C-203ENST00000395896 DRG2P55039 364 aaKnown RBP3.59□□□□□ -1.83
VPS13C-203ENST00000395896 EFHC1Q5JVL4 640 aa3.59□□□□□ -1.83
VPS13C-203ENST00000395896 ZNF557Q8N988 423 aaPredicted RBP3.59□□□□□ -1.83
VPS13C-203ENST00000395896 APPL2Q8NEU8 664 aa3.59□□□□□ -1.83
VPS13C-203ENST00000395896 USP13Q92995 863 aaPredicted RBP3.59□□□□□ -1.83
VPS13C-203ENST00000395896 L3MBTL3Q96JM7 780 aaPredicted RBP3.59□□□□□ -1.83
VPS13C-203ENST00000395896 CABS1Q96KC9 395 aa3.59□□□□□ -1.83
VPS13C-203ENST00000395896 DDX50Q9BQ39 737 aaKnown RBP3.59□□□□□ -1.83
VPS13C-203ENST00000395896 UNC45AQ9H3U1 944 aa3.59□□□□□ -1.83
VPS13C-203ENST00000395896 GALCP54803 685 aa3.59□□□□□ -1.83
VPS13C-203ENST00000395896 CUL2Q13617 745 aa3.59□□□□□ -1.83
VPS13C-203ENST00000395896 SLC27A1Q6PCB7 646 aa3.59□□□□□ -1.83
VPS13C-203ENST00000395896 PRPF31Q8WWY3 499 aaKnown RBP3.59□□□□□ -1.83
VPS13C-203ENST00000395896 VPS39Q96JC1 886 aa3.59□□□□□ -1.83
VPS13C-203ENST00000395896 CDK5RAP1Q96SZ6 601 aaKnown RBP3.59□□□□□ -1.83
VPS13C-203ENST00000395896 BCCIPQ9P287 314 aaKnown RBP eCLIP3.59□□□□□ -1.83
VPS13C-203ENST00000395896 DERAQ9Y315 318 aa3.59□□□□□ -1.83
VPS13C-203ENST00000395896 ANKRD31Q8N7Z5 1873 aa3.59□□□□□ -1.83
VPS13C-203ENST00000395896 BUB1O43683 1085 aa3.59□□□□□ -1.83
VPS13C-203ENST00000395896 ASPHQ12797 758 aa3.59□□□□□ -1.83
VPS13C-203ENST00000395896 CASP8Q14790 479 aa3.59□□□□□ -1.83
VPS13C-203ENST00000395896 MPZL3Q6UWV2 235 aa3.59□□□□□ -1.83
VPS13C-203ENST00000395896 TRMT10CQ7L0Y3 403 aaKnown RBP3.59□□□□□ -1.83
VPS13C-203ENST00000395896 EXD1Q8NHP7 514 aa3.59□□□□□ -1.83
VPS13C-203ENST00000395896 KRT35Q92764 455 aa3.59□□□□□ -1.83
VPS13C-203ENST00000395896 NIFKQ9BYG3 293 aaKnown RBP3.59□□□□□ -1.83
VPS13C-203ENST00000395896 BRD8Q9H0E9 1235 aa3.59□□□□□ -1.83
VPS13C-203ENST00000395896 ARHGAP28Q9P2N2 729 aa3.59□□□□□ -1.83
VPS13C-203ENST00000395896 A0A0G2JLL6 359 aaPredicted RBP3.59□□□□□ -1.83
VPS13C-203ENST00000395896 ITIH2P19823 946 aa3.59□□□□□ -1.83
VPS13C-203ENST00000395896 PRPSAP1Q14558 356 aa3.59□□□□□ -1.83
VPS13C-203ENST00000395896 PSMD6Q15008 389 aa3.59□□□□□ -1.83
VPS13C-203ENST00000395896 PRRT2Q7Z6L0 340 aaPredicted RBP3.59□□□□□ -1.83
VPS13C-203ENST00000395896 CCDC25Q86WR0 208 aa3.59□□□□□ -1.83
VPS13C-203ENST00000395896 BRSK2Q8IWQ3 736 aa3.59□□□□□ -1.83
VPS13C-203ENST00000395896 SLC8A2Q9UPR5 921 aa3.59□□□□□ -1.83
VPS13C-203ENST00000395896 NMT1P30419 496 aaKnown RBP3.59□□□□□ -1.84
VPS13C-203ENST00000395896 BYSLQ13895 437 aaKnown RBP3.59□□□□□ -1.84
VPS13C-203ENST00000395896 PALM2Q8IXS6 379 aa3.59□□□□□ -1.84
VPS13C-203ENST00000395896 KCTD6Q8NC69 237 aa3.59□□□□□ -1.84
VPS13C-203ENST00000395896 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.59□□□□□ -1.84
VPS13C-203ENST00000395896 HPDLQ96IR7 371 aa3.59□□□□□ -1.84
VPS13C-203ENST00000395896 ARID3AQ99856 593 aa3.59□□□□□ -1.84
VPS13C-203ENST00000395896 TARS2Q9BW92 718 aaKnown RBP3.59□□□□□ -1.84
VPS13C-203ENST00000395896 Q9Y3F1 56 aa3.59□□□□□ -1.84
VPS13C-203ENST00000395896 PHIPQ8WWQ0 1821 aa3.59□□□□□ -1.84
VPS13C-203ENST00000395896 TBC1D8O95759 1140 aa3.59□□□□□ -1.84
VPS13C-203ENST00000395896 CYP2C18P33260 490 aa3.59□□□□□ -1.84
VPS13C-203ENST00000395896 BCAT1P54687 386 aa3.59□□□□□ -1.84
VPS13C-203ENST00000395896 UGP2Q16851 508 aa3.59□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms