RNA–Protein interactions for RNA: ENST00000395722.7

PTPN20-206, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,995 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-206ENST00000395722 GJB7Q6PEY0 223 aa16.3■□□□□ 0.2
PTPN20-206ENST00000395722 ARHGEF19Q8IW93 802 aa16.3■□□□□ 0.2
PTPN20-206ENST00000395722 ZNF397Q8NF99 534 aaPredicted RBP16.3■□□□□ 0.2
PTPN20-206ENST00000395722 DBF4BQ8NFT6 615 aa16.3■□□□□ 0.2
PTPN20-206ENST00000395722 HELQQ8TDG4 1101 aa16.3■□□□□ 0.2
PTPN20-206ENST00000395722 SEPT8Q92599 483 aa16.3■□□□□ 0.2
PTPN20-206ENST00000395722 SYN2Q92777 582 aaPredicted RBP16.3■□□□□ 0.2
PTPN20-206ENST00000395722 VWCEQ96DN2 955 aa16.3■□□□□ 0.2
PTPN20-206ENST00000395722 KIF12Q96FN5 646 aa16.3■□□□□ 0.2
PTPN20-206ENST00000395722 SCLYQ96I15 445 aa16.3■□□□□ 0.2
PTPN20-206ENST00000395722 NT5C1BQ96P26 610 aa16.3■□□□□ 0.2
PTPN20-206ENST00000395722 NLRC4Q9NPP4 1024 aa16.3■□□□□ 0.2
PTPN20-206ENST00000395722 C1orf112Q9NSG2 853 aa16.3■□□□□ 0.2
PTPN20-206ENST00000395722 TULP1O00294 542 aaPredicted RBP16.29■□□□□ 0.2
PTPN20-206ENST00000395722 PTGESO14684 152 aa16.29■□□□□ 0.2
PTPN20-206ENST00000395722 INPPL1O15357 1258 aa16.29■□□□□ 0.2
PTPN20-206ENST00000395722 PHACTR2O75167 634 aa16.29■□□□□ 0.2
PTPN20-206ENST00000395722 CST3P01034 146 aaPredicted RBP16.29■□□□□ 0.2
PTPN20-206ENST00000395722 RFC2P35250 354 aa16.29■□□□□ 0.2
PTPN20-206ENST00000395722 CCL23P55773 120 aa16.29■□□□□ 0.2
PTPN20-206ENST00000395722 MEA1Q16626 185 aa16.29■□□□□ 0.2
PTPN20-206ENST00000395722 TCTN1Q2MV58 587 aa16.29■□□□□ 0.2
PTPN20-206ENST00000395722 SLC24A5Q71RS6 500 aa16.29■□□□□ 0.2
PTPN20-206ENST00000395722 CACNA2D4Q7Z3S7 1137 aa16.29■□□□□ 0.2
PTPN20-206ENST00000395722 GSTCDQ8NEC7 633 aa16.29■□□□□ 0.2
PTPN20-206ENST00000395722 STK33Q9BYT3 514 aa16.29■□□□□ 0.2
PTPN20-206ENST00000395722 XYLT2Q9H1B5 865 aa16.29■□□□□ 0.2
PTPN20-206ENST00000395722 NUCKS1Q9H1E3 243 aaKnown RBP16.29■□□□□ 0.2
PTPN20-206ENST00000395722 KLK14Q9P0G3 267 aa16.29■□□□□ 0.2
PTPN20-206ENST00000395722 DNAJC12Q9UKB3 198 aa16.29■□□□□ 0.2
PTPN20-206ENST00000395722 ITGA11Q9UKX5 1188 aa16.29■□□□□ 0.2
PTPN20-206ENST00000395722 PLAGL2Q9UPG8 496 aa16.29■□□□□ 0.2
PTPN20-206ENST00000395722 LRRC53A6NM62 1247 aa16.29■□□□□ 0.2
PTPN20-206ENST00000395722 GCNT1Q02742 428 aa16.29■□□□□ 0.2
PTPN20-206ENST00000395722 E4F1Q66K89 784 aaPredicted RBP16.29■□□□□ 0.2
PTPN20-206ENST00000395722 WDR59Q6PJI9 974 aa16.29■□□□□ 0.2
PTPN20-206ENST00000395722 RRAGAQ7L523 313 aa16.29■□□□□ 0.2
PTPN20-206ENST00000395722 CCDC112Q8NEF3 446 aa16.29■□□□□ 0.2
PTPN20-206ENST00000395722 PGBD4Q96DM1 585 aa16.29■□□□□ 0.2
PTPN20-206ENST00000395722 ZNF830Q96NB3 372 aaPredicted RBP16.29■□□□□ 0.2
PTPN20-206ENST00000395722 PPP1R10Q96QC0 940 aaKnown RBP16.29■□□□□ 0.2
PTPN20-206ENST00000395722 PI4K2AQ9BTU6 479 aa16.29■□□□□ 0.2
PTPN20-206ENST00000395722 APOBEC3GQ9HC16 384 aaKnown RBP16.29■□□□□ 0.2
PTPN20-206ENST00000395722 DPP3Q9NY33 737 aa16.29■□□□□ 0.2
PTPN20-206ENST00000395722 UBQLN1Q9UMX0 589 aaKnown RBP16.29■□□□□ 0.2
PTPN20-206ENST00000395722 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.29■□□□□ 0.2
PTPN20-206ENST00000395722 ALPK3Q96L96 1907 aa16.28■□□□□ 0.2
PTPN20-206ENST00000395722 TRIM43BA6NCK2 446 aa16.28■□□□□ 0.2
PTPN20-206ENST00000395722 EOMESO95936 686 aa16.28■□□□□ 0.2
PTPN20-206ENST00000395722 TIMP1P01033 207 aa16.28■□□□□ 0.2
PTPN20-206ENST00000395722 CYP3A5P20815 502 aa16.28■□□□□ 0.2
PTPN20-206ENST00000395722 MYL6P60660 151 aa16.28■□□□□ 0.2
PTPN20-206ENST00000395722 TAF4BQ92750 862 aa16.28■□□□□ 0.2
PTPN20-206ENST00000395722 LPPQ93052 612 aa16.28■□□□□ 0.2
PTPN20-206ENST00000395722 TATDN2Q93075 761 aa16.28■□□□□ 0.2
PTPN20-206ENST00000395722 TRIM43Q96BQ3 446 aaPredicted RBP16.28■□□□□ 0.2
PTPN20-206ENST00000395722 TRIM44Q96DX7 344 aaPredicted RBP16.28■□□□□ 0.2
PTPN20-206ENST00000395722 KREMEN1Q96MU8 473 aa16.28■□□□□ 0.2
PTPN20-206ENST00000395722 GPR88Q9GZN0 384 aa16.28■□□□□ 0.2
PTPN20-206ENST00000395722 VRTNQ9H8Y1 702 aa16.28■□□□□ 0.2
PTPN20-206ENST00000395722 UBE2TQ9NPD8 197 aaPredicted RBP16.28■□□□□ 0.2
PTPN20-206ENST00000395722 UBN1Q9NPG3 1134 aa16.28■□□□□ 0.2
PTPN20-206ENST00000395722 AIPL1Q9NZN9 384 aa16.28■□□□□ 0.2
PTPN20-206ENST00000395722 ENPP3O14638 875 aa16.27■□□□□ 0.2
PTPN20-206ENST00000395722 STAU1O95793 577 aaKnown RBP16.27■□□□□ 0.2
PTPN20-206ENST00000395722 GUCY2FP51841 1108 aa16.27■□□□□ 0.2
PTPN20-206ENST00000395722 NOP14P78316 857 aaKnown RBP16.27■□□□□ 0.2
PTPN20-206ENST00000395722 CDK17Q00537 523 aa16.27■□□□□ 0.2
PTPN20-206ENST00000395722 NAB2Q15742 525 aa16.27■□□□□ 0.2
PTPN20-206ENST00000395722 SGSM1Q2NKQ1 1148 aa16.27■□□□□ 0.2
PTPN20-206ENST00000395722 WDR44Q5JSH3 913 aa16.27■□□□□ 0.2
PTPN20-206ENST00000395722 GLRA4Q5JXX5 417 aa16.27■□□□□ 0.2
PTPN20-206ENST00000395722 SMYD5Q6GMV2 418 aa16.27■□□□□ 0.2
PTPN20-206ENST00000395722 TMEM130Q8N3G9 435 aa16.27■□□□□ 0.2
PTPN20-206ENST00000395722 BEST2Q8NFU1 509 aa16.27■□□□□ 0.2
PTPN20-206ENST00000395722 FAM81BQ96LP2 452 aa16.27■□□□□ 0.2
PTPN20-206ENST00000395722 GAD1Q99259 594 aa16.27■□□□□ 0.2
PTPN20-206ENST00000395722 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.27■□□□□ 0.2
PTPN20-206ENST00000395722 F8VZ95 297 aa16.27■□□□□ 0.19
PTPN20-206ENST00000395722 ITGB3P05106 788 aa16.27■□□□□ 0.19
PTPN20-206ENST00000395722 ITGB8P26012 769 aa16.27■□□□□ 0.19
PTPN20-206ENST00000395722 ATICP31939 592 aa16.27■□□□□ 0.19
PTPN20-206ENST00000395722 MLH1P40692 756 aa16.27■□□□□ 0.19
PTPN20-206ENST00000395722 TRPC3Q13507 836 aa16.27■□□□□ 0.19
PTPN20-206ENST00000395722 DRAP1Q14919 205 aaPredicted RBP16.27■□□□□ 0.19
PTPN20-206ENST00000395722 ENOSF1Q7L5Y1 443 aa16.27■□□□□ 0.19
PTPN20-206ENST00000395722 KAT5Q92993 513 aa16.27■□□□□ 0.19
PTPN20-206ENST00000395722 C18orf25Q96B23 403 aaPredicted RBP16.27■□□□□ 0.19
PTPN20-206ENST00000395722 FAXDC2Q96IV6 333 aa16.27■□□□□ 0.19
PTPN20-206ENST00000395722 ZFP42Q96MM3 310 aa16.27■□□□□ 0.19
PTPN20-206ENST00000395722 BAG1Q99933 345 aaPredicted RBP16.27■□□□□ 0.19
PTPN20-206ENST00000395722 ELAC1Q9H777 363 aaKnown RBP16.27■□□□□ 0.19
PTPN20-206ENST00000395722 RSAD1Q9HA92 442 aa16.27■□□□□ 0.19
PTPN20-206ENST00000395722 TUBGCP4Q9UGJ1 667 aa16.27■□□□□ 0.19
PTPN20-206ENST00000395722 NUB1Q9Y5A7 615 aa16.27■□□□□ 0.19
PTPN20-206ENST00000395722 ANO9A1A5B4 782 aa16.26■□□□□ 0.19
PTPN20-206ENST00000395722 ARL5CA6NH57 179 aa16.26■□□□□ 0.19
PTPN20-206ENST00000395722 XPOTO43592 962 aaKnown RBP16.26■□□□□ 0.19
PTPN20-206ENST00000395722 POLR2BP30876 1174 aaKnown RBP16.26■□□□□ 0.19
PTPN20-206ENST00000395722 RBP5P82980 135 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms