RNA–Protein interactions for RNA: ENST00000395453.2

SCAF11-203, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCAF11, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-203ENST00000395453 DCLRE1AQ6PJP8 1040 aa14.84□□□□□ -0.03
SCAF11-203ENST00000395453 PRSS55Q6UWB4 352 aaPredicted RBP14.84□□□□□ -0.03
SCAF11-203ENST00000395453 SPATA31D4Q6ZUB0 917 aa14.84□□□□□ -0.03
SCAF11-203ENST00000395453 LNX1Q8TBB1 728 aaPredicted RBP14.84□□□□□ -0.03
SCAF11-203ENST00000395453 SPIRE2Q8WWL2 714 aa14.84□□□□□ -0.03
SCAF11-203ENST00000395453 AK8Q96MA6 479 aa14.84□□□□□ -0.03
SCAF11-203ENST00000395453 MYADMQ96S97 322 aa14.84□□□□□ -0.03
SCAF11-203ENST00000395453 CLSTN3Q9BQT9 956 aa14.84□□□□□ -0.03
SCAF11-203ENST00000395453 TARS2Q9BW92 718 aaKnown RBP14.84□□□□□ -0.03
SCAF11-203ENST00000395453 CDT1Q9H211 546 aa14.84□□□□□ -0.03
SCAF11-203ENST00000395453 KCND2Q9NZV8 630 aa14.84□□□□□ -0.03
SCAF11-203ENST00000395453 KCNG1Q9UIX4 513 aa14.84□□□□□ -0.03
SCAF11-203ENST00000395453 CACNA1GO43497 2377 aa14.84□□□□□ -0.03
SCAF11-203ENST00000395453 SMIM28A0A1B0GU29 152 aa14.83□□□□□ -0.04
SCAF11-203ENST00000395453 SLC16A4O15374 487 aa14.83□□□□□ -0.04
SCAF11-203ENST00000395453 PLS3P13797 630 aa14.83□□□□□ -0.04
SCAF11-203ENST00000395453 RPL17P18621 184 aaKnown RBP14.83□□□□□ -0.04
SCAF11-203ENST00000395453 IGFBP6P24592 240 aaPredicted RBP14.83□□□□□ -0.04
SCAF11-203ENST00000395453 ELAVL2Q12926 359 aaKnown RBP14.83□□□□□ -0.04
SCAF11-203ENST00000395453 UPP1Q16831 310 aa14.83□□□□□ -0.04
SCAF11-203ENST00000395453 ARSHQ5FYA8 562 aa14.83□□□□□ -0.04
SCAF11-203ENST00000395453 VARS2Q5ST30 1063 aaKnown RBP14.83□□□□□ -0.04
SCAF11-203ENST00000395453 CD300LGQ6UXG3 332 aa14.83□□□□□ -0.04
SCAF11-203ENST00000395453 CEP120Q8N960 986 aa14.83□□□□□ -0.04
SCAF11-203ENST00000395453 TMEM161BQ8NDZ6 487 aa14.83□□□□□ -0.04
SCAF11-203ENST00000395453 PJA1Q8NG27 643 aa14.83□□□□□ -0.04
SCAF11-203ENST00000395453 HASPINQ8TF76 798 aa14.83□□□□□ -0.04
SCAF11-203ENST00000395453 KCNN1Q92952 543 aa14.83□□□□□ -0.04
SCAF11-203ENST00000395453 SHDQ96IW2 340 aa14.83□□□□□ -0.04
SCAF11-203ENST00000395453 ZDHHC7Q9NXF8 308 aa14.83□□□□□ -0.04
SCAF11-203ENST00000395453 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.83□□□□□ -0.04
SCAF11-203ENST00000395453 NCDNQ9UBB6 729 aa14.83□□□□□ -0.04
SCAF11-203ENST00000395453 MYH11P35749 1972 aa14.83□□□□□ -0.04
SCAF11-203ENST00000395453 VWA8A3KMH1 1905 aa14.82□□□□□ -0.04
SCAF11-203ENST00000395453 SPTLC1O15269 473 aa14.82□□□□□ -0.04
SCAF11-203ENST00000395453 PLA2G4BP0C869 781 aa14.82□□□□□ -0.04
SCAF11-203ENST00000395453 MCF2P10911 925 aa14.82□□□□□ -0.04
SCAF11-203ENST00000395453 FGFR3P22607 806 aa14.82□□□□□ -0.04
SCAF11-203ENST00000395453 ATXN1P54253 815 aaKnown RBP14.82□□□□□ -0.04
SCAF11-203ENST00000395453 RAD51AP2Q09MP3 1159 aa14.82□□□□□ -0.04
SCAF11-203ENST00000395453 ZRSR1Q15695 479 aaKnown RBP14.82□□□□□ -0.04
SCAF11-203ENST00000395453 ZNF528Q3MIS6 628 aa14.82□□□□□ -0.04
SCAF11-203ENST00000395453 ZNF568Q3ZCX4 644 aa14.82□□□□□ -0.04
SCAF11-203ENST00000395453 GLRA4Q5JXX5 417 aa14.82□□□□□ -0.04
SCAF11-203ENST00000395453 PDXDC1Q6P996 788 aa14.82□□□□□ -0.04
SCAF11-203ENST00000395453 BRAPQ7Z569 592 aa14.82□□□□□ -0.04
SCAF11-203ENST00000395453 GLYCTKQ8IVS8 523 aa14.82□□□□□ -0.04
SCAF11-203ENST00000395453 SMG7Q92540 1137 aaKnown RBP14.82□□□□□ -0.04
SCAF11-203ENST00000395453 SECISBP2LQ93073 1101 aaKnown RBP14.82□□□□□ -0.04
SCAF11-203ENST00000395453 UROC1Q96N76 676 aa14.82□□□□□ -0.04
SCAF11-203ENST00000395453 PLIN2Q99541 437 aa14.82□□□□□ -0.04
SCAF11-203ENST00000395453 CCDC94Q9BW85 323 aaPredicted RBP14.82□□□□□ -0.04
SCAF11-203ENST00000395453 PRKD2Q9BZL6 878 aa14.82□□□□□ -0.04
SCAF11-203ENST00000395453 SLC2A4RGQ9NR83 387 aa14.82□□□□□ -0.04
SCAF11-203ENST00000395453 TOPORSQ9NS56 1045 aaPredicted RBP14.82□□□□□ -0.04
SCAF11-203ENST00000395453 PRR5-ARHGAP8B1AHC4 643 aa14.81□□□□□ -0.04
SCAF11-203ENST00000395453 TOM1L1O75674 476 aa14.81□□□□□ -0.04
SCAF11-203ENST00000395453 ZMYND10O75800 440 aa14.81□□□□□ -0.04
SCAF11-203ENST00000395453 B3GAT3O94766 335 aa14.81□□□□□ -0.04
SCAF11-203ENST00000395453 BMP15O95972 392 aa14.81□□□□□ -0.04
SCAF11-203ENST00000395453 MYBP10242 640 aa14.81□□□□□ -0.04
SCAF11-203ENST00000395453 MAPTP10636 758 aaKnown RBP14.81□□□□□ -0.04
SCAF11-203ENST00000395453 LAMP2P13473 410 aa14.81□□□□□ -0.04
SCAF11-203ENST00000395453 GLULP15104 373 aa14.81□□□□□ -0.04
SCAF11-203ENST00000395453 KCNE1P15382 129 aa14.81□□□□□ -0.04
SCAF11-203ENST00000395453 CLCNKBP51801 687 aa14.81□□□□□ -0.04
SCAF11-203ENST00000395453 SMTNP53814 917 aa14.81□□□□□ -0.04
SCAF11-203ENST00000395453 YARSP54577 528 aaKnown RBP14.81□□□□□ -0.04
SCAF11-203ENST00000395453 STARD6P59095 220 aa14.81□□□□□ -0.04
SCAF11-203ENST00000395453 ARHGAP8P85298 464 aa14.81□□□□□ -0.04
SCAF11-203ENST00000395453 SOX4Q06945 474 aaPredicted RBP14.81□□□□□ -0.04
SCAF11-203ENST00000395453 PSMD5Q16401 504 aa14.81□□□□□ -0.04
SCAF11-203ENST00000395453 MPZL3Q6UWV2 235 aa14.81□□□□□ -0.04
SCAF11-203ENST00000395453 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.81□□□□□ -0.04
SCAF11-203ENST00000395453 CEP57Q86XR8 500 aa14.81□□□□□ -0.04
SCAF11-203ENST00000395453 MAML2Q8IZL2 1156 aaPredicted RBP14.81□□□□□ -0.04
SCAF11-203ENST00000395453 LRRC15Q8TF66 581 aa14.81□□□□□ -0.04
SCAF11-203ENST00000395453 CDK5RAP3Q96JB5 506 aa14.81□□□□□ -0.04
SCAF11-203ENST00000395453 ZBTB45Q96K62 511 aaPredicted RBP14.81□□□□□ -0.04
SCAF11-203ENST00000395453 ZMAT2Q96NC0 199 aaKnown RBP14.81□□□□□ -0.04
SCAF11-203ENST00000395453 ACAP3Q96P50 834 aa14.81□□□□□ -0.04
SCAF11-203ENST00000395453 FOXQ1Q9C009 403 aa14.81□□□□□ -0.04
SCAF11-203ENST00000395453 PIDD1Q9HB75 910 aa14.81□□□□□ -0.04
SCAF11-203ENST00000395453 FBXW11Q9UKB1 542 aa14.81□□□□□ -0.04
SCAF11-203ENST00000395453 FBXO4Q9UKT5 387 aa14.81□□□□□ -0.04
SCAF11-203ENST00000395453 DOCK8Q8NF50 2099 aa14.81□□□□□ -0.04
SCAF11-203ENST00000395453 CITO14578 2027 aa14.8□□□□□ -0.04
SCAF11-203ENST00000395453 ANHXE9PGG2 379 aa14.8□□□□□ -0.04
SCAF11-203ENST00000395453 MEFVO15553 781 aaPredicted RBP14.8□□□□□ -0.04
SCAF11-203ENST00000395453 ADAM12O43184 909 aa14.8□□□□□ -0.04
SCAF11-203ENST00000395453 LAMTOR5O43504 91 aa14.8□□□□□ -0.04
SCAF11-203ENST00000395453 OSTNP61366 133 aa14.8□□□□□ -0.04
SCAF11-203ENST00000395453 RAB33AQ14088 237 aa14.8□□□□□ -0.04
SCAF11-203ENST00000395453 ZPBP2Q6X784 338 aa14.8□□□□□ -0.04
SCAF11-203ENST00000395453 C3orf58Q8NDZ4 430 aa14.8□□□□□ -0.04
SCAF11-203ENST00000395453 DDX27Q96GQ7 796 aaKnown RBP14.8□□□□□ -0.04
SCAF11-203ENST00000395453 TCHPQ9BT92 498 aa14.8□□□□□ -0.04
SCAF11-203ENST00000395453 BCO2Q9BYV7 579 aa14.8□□□□□ -0.04
SCAF11-203ENST00000395453 GOLGA2P5Q9HBQ8 144 aa14.8□□□□□ -0.04
SCAF11-203ENST00000395453 BLOC1S4Q9NUP1 217 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms