RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 CDCA2Q69YH5 1023 aaPredicted RBP14.93□□□□□ -0.02
SNCA-204ENST00000394989 CCDC62Q6P9F0 684 aa14.93□□□□□ -0.02
SNCA-204ENST00000394989 MCOLN2Q8IZK6 566 aa14.93□□□□□ -0.02
SNCA-204ENST00000394989 MORC4Q8TE76 937 aa14.93□□□□□ -0.02
SNCA-204ENST00000394989 COPS5Q92905 334 aa14.93□□□□□ -0.02
SNCA-204ENST00000394989 DPH5Q9H2P9 285 aa14.93□□□□□ -0.02
SNCA-204ENST00000394989 AZI2Q9H6S1 392 aa14.93□□□□□ -0.02
SNCA-204ENST00000394989 MROH7Q68CQ1 1323 aa14.92□□□□□ -0.02
SNCA-204ENST00000394989 IGKV6-21A0A0C4DH24 114 aa14.92□□□□□ -0.02
SNCA-204ENST00000394989 ABLIM1O14639 778 aa14.92□□□□□ -0.02
SNCA-204ENST00000394989 CYP1A1P04798 512 aaPredicted RBP14.92□□□□□ -0.02
SNCA-204ENST00000394989 CTNNA2P26232 953 aa14.92□□□□□ -0.02
SNCA-204ENST00000394989 LAMTOR4Q0VGL1 99 aa14.92□□□□□ -0.02
SNCA-204ENST00000394989 PPFIA1Q13136 1202 aa14.92□□□□□ -0.02
SNCA-204ENST00000394989 ZPBP2Q6X784 338 aa14.92□□□□□ -0.02
SNCA-204ENST00000394989 ZBTB10Q96DT7 871 aa14.92□□□□□ -0.02
SNCA-204ENST00000394989 CYFIP2Q96F07 1278 aa14.92□□□□□ -0.02
SNCA-204ENST00000394989 FAM81BQ96LP2 452 aa14.92□□□□□ -0.02
SNCA-204ENST00000394989 RUFY1Q96T51 708 aa14.92□□□□□ -0.02
SNCA-204ENST00000394989 CLDN3O15551 220 aa14.92□□□□□ -0.02
SNCA-204ENST00000394989 CST3P01034 146 aaPredicted RBP14.92□□□□□ -0.02
SNCA-204ENST00000394989 SRGAP2CP0DJJ0 459 aa14.92□□□□□ -0.02
SNCA-204ENST00000394989 RRM1P23921 792 aa14.92□□□□□ -0.02
SNCA-204ENST00000394989 DUPD1Q68J44 220 aa14.92□□□□□ -0.02
SNCA-204ENST00000394989 TTC27Q6P3X3 843 aa14.92□□□□□ -0.02
SNCA-204ENST00000394989 ZNF677Q86XU0 584 aa14.92□□□□□ -0.02
SNCA-204ENST00000394989 CD302Q8IX05 232 aa14.92□□□□□ -0.02
SNCA-204ENST00000394989 UPF1Q92900 1129 aaKnown RBP eCLIP14.92□□□□□ -0.02
SNCA-204ENST00000394989 TRIM31Q9BZY9 425 aa14.92□□□□□ -0.02
SNCA-204ENST00000394989 UTP11Q9Y3A2 253 aaKnown RBP14.92□□□□□ -0.02
SNCA-204ENST00000394989 H0YGN5 161 aa14.91□□□□□ -0.02
SNCA-204ENST00000394989 SPOPO43791 374 aa14.91□□□□□ -0.02
SNCA-204ENST00000394989 GJB1P08034 283 aa14.91□□□□□ -0.02
SNCA-204ENST00000394989 CLTAP09496 248 aa14.91□□□□□ -0.02
SNCA-204ENST00000394989 GJA5P36382 358 aa14.91□□□□□ -0.02
SNCA-204ENST00000394989 CENPCQ03188 943 aa14.91□□□□□ -0.02
SNCA-204ENST00000394989 TTLL12Q14166 644 aaPredicted RBP14.91□□□□□ -0.02
SNCA-204ENST00000394989 PLCB4Q15147 1175 aa14.91□□□□□ -0.02
SNCA-204ENST00000394989 SIX1Q15475 284 aaPredicted RBP14.91□□□□□ -0.02
SNCA-204ENST00000394989 C9orf131Q5VYM1 1079 aa14.91□□□□□ -0.02
SNCA-204ENST00000394989 TMEM270Q6UE05 265 aa14.91□□□□□ -0.02
SNCA-204ENST00000394989 PHLDB2Q86SQ0 1253 aa14.91□□□□□ -0.02
SNCA-204ENST00000394989 ZBTB33Q86T24 672 aa14.91□□□□□ -0.02
SNCA-204ENST00000394989 SH2D3CQ8N5H7 860 aa14.91□□□□□ -0.02
SNCA-204ENST00000394989 TRAPPC12Q8WVT3 735 aa14.91□□□□□ -0.02
SNCA-204ENST00000394989 PDGFCQ9NRA1 345 aa14.91□□□□□ -0.02
SNCA-204ENST00000394989 PLAAQ9Y263 795 aa14.91□□□□□ -0.02
SNCA-204ENST00000394989 NFS1Q9Y697 457 aa14.91□□□□□ -0.02
SNCA-204ENST00000394989 GOLGA6L10A0A0M3HER8 536 aa14.91□□□□□ -0.02
SNCA-204ENST00000394989 SHOX2O60902 331 aaPredicted RBP14.91□□□□□ -0.02
SNCA-204ENST00000394989 SSTR3P32745 418 aaPredicted RBP14.91□□□□□ -0.02
SNCA-204ENST00000394989 PTGIRP43119 386 aa14.91□□□□□ -0.02
SNCA-204ENST00000394989 NOP14P78316 857 aaKnown RBP14.91□□□□□ -0.02
SNCA-204ENST00000394989 IER5Q5VY09 327 aa14.91□□□□□ -0.02
SNCA-204ENST00000394989 KCTD16Q68DU8 428 aa14.91□□□□□ -0.02
SNCA-204ENST00000394989 MON1BQ7L1V2 547 aa14.91□□□□□ -0.02
SNCA-204ENST00000394989 TADA2BQ86TJ2 420 aa14.91□□□□□ -0.02
SNCA-204ENST00000394989 RNF149Q8NC42 400 aa14.91□□□□□ -0.02
SNCA-204ENST00000394989 KAT2BQ92831 832 aa14.91□□□□□ -0.02
SNCA-204ENST00000394989 FAM167AQ96KS9 214 aa14.91□□□□□ -0.02
SNCA-204ENST00000394989 MMP19Q99542 508 aa14.91□□□□□ -0.02
SNCA-204ENST00000394989 ACO2Q99798 780 aaKnown RBP14.91□□□□□ -0.02
SNCA-204ENST00000394989 NCAPGQ9BPX3 1015 aa14.91□□□□□ -0.02
SNCA-204ENST00000394989 CNTN6Q9UQ52 1028 aa14.91□□□□□ -0.02
SNCA-204ENST00000394989 PHF2O75151 1096 aa14.91□□□□□ -0.02
SNCA-204ENST00000394989 TOM1L1O75674 476 aa14.91□□□□□ -0.02
SNCA-204ENST00000394989 ERLIN2O94905 339 aa14.91□□□□□ -0.02
SNCA-204ENST00000394989 NCOA4Q13772 614 aa14.91□□□□□ -0.02
SNCA-204ENST00000394989 BRSK2Q8IWQ3 736 aa14.91□□□□□ -0.02
SNCA-204ENST00000394989 SPATA33Q96N06 139 aa14.91□□□□□ -0.02
SNCA-204ENST00000394989 ERP44Q9BS26 406 aa14.91□□□□□ -0.02
SNCA-204ENST00000394989 SPON1Q9HCB6 807 aa14.91□□□□□ -0.02
SNCA-204ENST00000394989 ZDHHC18Q9NUE0 388 aa14.91□□□□□ -0.02
SNCA-204ENST00000394989 ANAPC7Q9UJX3 599 aa14.91□□□□□ -0.02
SNCA-204ENST00000394989 NOP56O00567 594 aaKnown RBP14.9□□□□□ -0.02
SNCA-204ENST00000394989 MYCNP04198 464 aaPredicted RBP14.9□□□□□ -0.02
SNCA-204ENST00000394989 EFNA5P52803 228 aa14.9□□□□□ -0.02
SNCA-204ENST00000394989 KCTD2Q14681 263 aa14.9□□□□□ -0.02
SNCA-204ENST00000394989 CLUL1Q15846 466 aa14.9□□□□□ -0.02
SNCA-204ENST00000394989 PLPPR4Q7Z2D5 763 aa14.9□□□□□ -0.02
SNCA-204ENST00000394989 TMC3Q7Z5M5 1100 aa14.9□□□□□ -0.02
SNCA-204ENST00000394989 JAMLQ86YT9 394 aa14.9□□□□□ -0.02
SNCA-204ENST00000394989 PASD1Q8IV76 773 aa14.9□□□□□ -0.02
SNCA-204ENST00000394989 OR2W6PQ8NHA6 318 aa14.9□□□□□ -0.02
SNCA-204ENST00000394989 ZNF668Q96K58 619 aaPredicted RBP14.9□□□□□ -0.02
SNCA-204ENST00000394989 MGAMO43451 1857 aa14.9□□□□□ -0.02
SNCA-204ENST00000394989 RPS6KA5O75582 802 aa14.9□□□□□ -0.02
SNCA-204ENST00000394989 DAB2IPQ5VWQ8 1189 aa14.9□□□□□ -0.02
SNCA-204ENST00000394989 SLC13A5Q86YT5 568 aaPredicted RBP14.9□□□□□ -0.02
SNCA-204ENST00000394989 MRPL4Q9BYD3 311 aaKnown RBP14.9□□□□□ -0.02
SNCA-204ENST00000394989 AVENQ9NQS1 362 aaPredicted RBP14.9□□□□□ -0.02
SNCA-204ENST00000394989 FAM114A2Q9NRY5 505 aa14.9□□□□□ -0.02
SNCA-204ENST00000394989 GEMIN8Q9NWZ8 242 aaKnown RBP14.9□□□□□ -0.02
SNCA-204ENST00000394989 PCDHB4Q9Y5E5 795 aa14.9□□□□□ -0.02
SNCA-204ENST00000394989 H0YHG0 523 aa14.89□□□□□ -0.03
SNCA-204ENST00000394989 BPIFB4P59827 614 aa14.89□□□□□ -0.03
SNCA-204ENST00000394989 DHX34Q14147 1143 aaKnown RBP14.89□□□□□ -0.03
SNCA-204ENST00000394989 PPP2R5EQ16537 467 aa14.89□□□□□ -0.03
SNCA-204ENST00000394989 SEL1L2Q5TEA6 688 aa14.89□□□□□ -0.03
SNCA-204ENST00000394989 KCNV1Q6PIU1 500 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms