RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 ALDH1A3P47895 512 aa10.94□□□□□ -0.66
COL4A6-203ENST00000394872 SNRNP35Q16560 246 aaKnown RBP10.94□□□□□ -0.66
COL4A6-203ENST00000394872 ZNF34Q8IZ26 560 aa10.94□□□□□ -0.66
COL4A6-203ENST00000394872 TAGAPQ8N103 731 aa10.94□□□□□ -0.66
COL4A6-203ENST00000394872 LRRC71Q8N4P6 559 aa10.94□□□□□ -0.66
COL4A6-203ENST00000394872 NAF1Q96HR8 494 aaKnown RBP10.94□□□□□ -0.66
COL4A6-203ENST00000394872 HIST1H2AHQ96KK5 128 aa10.94□□□□□ -0.66
COL4A6-203ENST00000394872 HIST1H2AJQ99878 128 aa10.94□□□□□ -0.66
COL4A6-203ENST00000394872 H2AFJQ9BTM1 129 aa10.94□□□□□ -0.66
COL4A6-203ENST00000394872 SPDYE5A6NIY4 337 aa10.94□□□□□ -0.66
COL4A6-203ENST00000394872 AP3B1O00203 1094 aa10.94□□□□□ -0.66
COL4A6-203ENST00000394872 HMOX2P30519 316 aa10.94□□□□□ -0.66
COL4A6-203ENST00000394872 HIF1AQ16665 826 aa10.94□□□□□ -0.66
COL4A6-203ENST00000394872 SPDYE7PQ495Y7 208 aa10.94□□□□□ -0.66
COL4A6-203ENST00000394872 CHST13Q8NET6 341 aa10.94□□□□□ -0.66
COL4A6-203ENST00000394872 SENP7Q9BQF6 1050 aa10.94□□□□□ -0.66
COL4A6-203ENST00000394872 ERAP1Q9NZ08 941 aa10.94□□□□□ -0.66
COL4A6-203ENST00000394872 MAD2L2Q9UI95 211 aa10.94□□□□□ -0.66
COL4A6-203ENST00000394872 ZSCAN9O15535 394 aaPredicted RBP10.94□□□□□ -0.66
COL4A6-203ENST00000394872 MYBP10242 640 aa10.94□□□□□ -0.66
COL4A6-203ENST00000394872 BRAFP15056 766 aa10.94□□□□□ -0.66
COL4A6-203ENST00000394872 FBXO38Q6PIJ6 1188 aa10.94□□□□□ -0.66
COL4A6-203ENST00000394872 RNF180Q86T96 592 aa10.94□□□□□ -0.66
COL4A6-203ENST00000394872 PABPC5Q96DU9 382 aaKnown RBP10.94□□□□□ -0.66
COL4A6-203ENST00000394872 PHF20Q9BVI0 1012 aa10.94□□□□□ -0.66
COL4A6-203ENST00000394872 ZFATQ9P243 1243 aa10.94□□□□□ -0.66
COL4A6-203ENST00000394872 HDAC6Q9UBN7 1215 aa10.94□□□□□ -0.66
COL4A6-203ENST00000394872 FBXO2Q9UK22 296 aaPredicted RBP10.94□□□□□ -0.66
COL4A6-203ENST00000394872 GNASQ5JWF2 1037 aa10.93□□□□□ -0.66
COL4A6-203ENST00000394872 SAMD7Q7Z3H4 446 aa10.93□□□□□ -0.66
COL4A6-203ENST00000394872 ZNF507Q8TCN5 953 aa10.93□□□□□ -0.66
COL4A6-203ENST00000394872 MCEEQ96PE7 176 aa10.93□□□□□ -0.66
COL4A6-203ENST00000394872 DEFB129Q9H1M3 183 aa10.93□□□□□ -0.66
COL4A6-203ENST00000394872 SPATS2LQ9NUQ6 558 aaKnown RBP10.93□□□□□ -0.66
COL4A6-203ENST00000394872 SNX5Q9Y5X3 404 aa10.93□□□□□ -0.66
COL4A6-203ENST00000394872 NPTXRO95502 500 aa10.93□□□□□ -0.66
COL4A6-203ENST00000394872 ARFIP2P53365 341 aa10.93□□□□□ -0.66
COL4A6-203ENST00000394872 PPP2R2AP63151 447 aa10.93□□□□□ -0.66
COL4A6-203ENST00000394872 DMTNQ08495 405 aa10.93□□□□□ -0.66
COL4A6-203ENST00000394872 ANKRD13AQ8IZ07 590 aa10.93□□□□□ -0.66
COL4A6-203ENST00000394872 RBBP8NLQ8NC74 664 aaPredicted RBP10.93□□□□□ -0.66
COL4A6-203ENST00000394872 SCFD1Q8WVM8 642 aa10.93□□□□□ -0.66
COL4A6-203ENST00000394872 TAF1DQ9H5J8 278 aaPredicted RBP10.93□□□□□ -0.66
COL4A6-203ENST00000394872 WDR35Q9P2L0 1181 aa10.93□□□□□ -0.66
COL4A6-203ENST00000394872 RPS12P25398 132 aaKnown RBP10.93□□□□□ -0.66
COL4A6-203ENST00000394872 POLE2P56282 527 aa10.93□□□□□ -0.66
COL4A6-203ENST00000394872 MXRA8Q9BRK3 442 aa10.93□□□□□ -0.66
COL4A6-203ENST00000394872 A0A1W2PQC6 194 aa10.93□□□□□ -0.66
COL4A6-203ENST00000394872 ESYT3A0FGR9 886 aa10.93□□□□□ -0.66
COL4A6-203ENST00000394872 FLOT2Q14254 428 aa10.93□□□□□ -0.66
COL4A6-203ENST00000394872 PCSK7Q16549 785 aa10.93□□□□□ -0.66
COL4A6-203ENST00000394872 ELMO2Q96JJ3 720 aa10.93□□□□□ -0.66
COL4A6-203ENST00000394872 ALDH8A1Q9H2A2 487 aaPredicted RBP10.93□□□□□ -0.66
COL4A6-203ENST00000394872 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.93□□□□□ -0.66
COL4A6-203ENST00000394872 PDHBP11177 359 aa10.93□□□□□ -0.66
COL4A6-203ENST00000394872 DHX34Q14147 1143 aaKnown RBP10.93□□□□□ -0.66
COL4A6-203ENST00000394872 SPDYAQ5MJ70 313 aa10.93□□□□□ -0.66
COL4A6-203ENST00000394872 PKN3Q6P5Z2 889 aa10.93□□□□□ -0.66
COL4A6-203ENST00000394872 ABTB1Q969K4 478 aaPredicted RBP10.93□□□□□ -0.66
COL4A6-203ENST00000394872 PPP1R36Q96LQ0 422 aa10.93□□□□□ -0.66
COL4A6-203ENST00000394872 WARS2Q9UGM6 360 aaKnown RBP10.93□□□□□ -0.66
COL4A6-203ENST00000394872 H0Y3Z8 333 aa10.92□□□□□ -0.66
COL4A6-203ENST00000394872 TBX3O15119 743 aa10.92□□□□□ -0.66
COL4A6-203ENST00000394872 HBP1O60381 514 aa10.92□□□□□ -0.66
COL4A6-203ENST00000394872 NDUFS3O75489 264 aa10.92□□□□□ -0.66
COL4A6-203ENST00000394872 PNMA6AP0CW24 399 aaPredicted RBP10.92□□□□□ -0.66
COL4A6-203ENST00000394872 ARHGAP15Q53QZ3 475 aa10.92□□□□□ -0.66
COL4A6-203ENST00000394872 COBLL1Q53SF7 1204 aa10.92□□□□□ -0.66
COL4A6-203ENST00000394872 SLC7A14Q8TBB6 771 aa10.92□□□□□ -0.66
COL4A6-203ENST00000394872 OTULINQ96BN8 352 aa10.92□□□□□ -0.66
COL4A6-203ENST00000394872 OTUB1Q96FW1 271 aaPredicted RBP10.92□□□□□ -0.66
COL4A6-203ENST00000394872 STK33Q9BYT3 514 aa10.92□□□□□ -0.66
COL4A6-203ENST00000394872 FAM49BQ9NUQ9 324 aa10.92□□□□□ -0.66
COL4A6-203ENST00000394872 KCND2Q9NZV8 630 aa10.92□□□□□ -0.66
COL4A6-203ENST00000394872 C17orf102A2RUQ5 167 aa10.92□□□□□ -0.66
COL4A6-203ENST00000394872 GOLGA7BQ2TAP0 167 aa10.92□□□□□ -0.66
COL4A6-203ENST00000394872 MTHFD1LQ6UB35 978 aa10.92□□□□□ -0.66
COL4A6-203ENST00000394872 NT5C1AQ9BXI3 368 aa10.92□□□□□ -0.66
COL4A6-203ENST00000394872 UNC45AQ9H3U1 944 aa10.92□□□□□ -0.66
COL4A6-203ENST00000394872 TRPM1Q7Z4N2 1603 aa10.92□□□□□ -0.66
COL4A6-203ENST00000394872 RRN3P2A6NIE6 340 aa10.92□□□□□ -0.66
COL4A6-203ENST00000394872 C2CD2LO14523 706 aa10.92□□□□□ -0.66
COL4A6-203ENST00000394872 CYP2C19P33261 490 aa10.92□□□□□ -0.66
COL4A6-203ENST00000394872 FMO5P49326 533 aa10.92□□□□□ -0.66
COL4A6-203ENST00000394872 KRT72Q14CN4 511 aa10.92□□□□□ -0.66
COL4A6-203ENST00000394872 RABL6Q3YEC7 729 aaPredicted RBP10.92□□□□□ -0.66
COL4A6-203ENST00000394872 LRRC8EQ6NSJ5 796 aa10.92□□□□□ -0.66
COL4A6-203ENST00000394872 NOTUMQ6P988 496 aa10.92□□□□□ -0.66
COL4A6-203ENST00000394872 PATL1Q86TB9 770 aaKnown RBP10.92□□□□□ -0.66
COL4A6-203ENST00000394872 RNPC3Q96LT9 517 aaKnown RBP10.92□□□□□ -0.66
COL4A6-203ENST00000394872 AGBL1Q96MI9 1066 aa10.92□□□□□ -0.66
COL4A6-203ENST00000394872 SELENONQ9NZV5 590 aa10.92□□□□□ -0.66
COL4A6-203ENST00000394872 FBXL5Q9UKA1 691 aa10.92□□□□□ -0.66
COL4A6-203ENST00000394872 SLC30A1Q9Y6M5 507 aa10.92□□□□□ -0.66
COL4A6-203ENST00000394872 RNF103-CHMP3A0A140T963 221 aa10.92□□□□□ -0.66
COL4A6-203ENST00000394872 CCDC78A2IDD5 438 aa10.92□□□□□ -0.66
COL4A6-203ENST00000394872 GRAP2O75791 330 aa10.92□□□□□ -0.66
COL4A6-203ENST00000394872 LRG1P02750 347 aa10.92□□□□□ -0.66
COL4A6-203ENST00000394872 PCSK1P29120 753 aa10.92□□□□□ -0.66
COL4A6-203ENST00000394872 PPP3CCP48454 512 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms