RNA–Protein interactions for RNA: ENST00000394269.7

TCOF1-203, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 3,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-203ENST00000394269 ACAD10Q6JQN1 1059 aa11.91□□□□□ -0.5
TCOF1-203ENST00000394269 RBBP8NLQ8NC74 664 aaPredicted RBP11.91□□□□□ -0.5
TCOF1-203ENST00000394269 AENQ8WTP8 325 aaKnown RBP11.91□□□□□ -0.5
TCOF1-203ENST00000394269 TCP11Q8WWU5 503 aa11.91□□□□□ -0.5
TCOF1-203ENST00000394269 MAGOHBQ96A72 148 aaKnown RBP11.91□□□□□ -0.5
TCOF1-203ENST00000394269 ERAP1Q9NZ08 941 aa11.91□□□□□ -0.5
TCOF1-203ENST00000394269 CPA4Q9UI42 421 aa11.91□□□□□ -0.5
TCOF1-203ENST00000394269 ABT1Q9ULW3 272 aaKnown RBP11.91□□□□□ -0.5
TCOF1-203ENST00000394269 PCDHB2Q9Y5E7 798 aa11.91□□□□□ -0.5
TCOF1-203ENST00000394269 GOLGA6L10A0A0M3HER8 536 aa11.91□□□□□ -0.5
TCOF1-203ENST00000394269 TCRBV7S2A1N4TA0A589 114 aa11.91□□□□□ -0.5
TCOF1-203ENST00000394269 MYO1FO00160 1098 aa11.91□□□□□ -0.5
TCOF1-203ENST00000394269 DDX3YO15523 660 aaKnown RBP11.91□□□□□ -0.5
TCOF1-203ENST00000394269 GTF2H1P32780 548 aa11.91□□□□□ -0.5
TCOF1-203ENST00000394269 IRX5P78411 483 aaPredicted RBP11.91□□□□□ -0.5
TCOF1-203ENST00000394269 ITIH3Q06033 890 aa11.91□□□□□ -0.5
TCOF1-203ENST00000394269 CFAP58Q5T655 872 aa11.91□□□□□ -0.5
TCOF1-203ENST00000394269 MMS22LQ6ZRQ5 1243 aa11.91□□□□□ -0.5
TCOF1-203ENST00000394269 CCDC26Q8TAB7 109 aa11.91□□□□□ -0.5
TCOF1-203ENST00000394269 BRI3BPQ8WY22 251 aa11.91□□□□□ -0.5
TCOF1-203ENST00000394269 C18orf8Q96DM3 657 aa11.91□□□□□ -0.5
TCOF1-203ENST00000394269 ACO2Q99798 780 aaKnown RBP11.91□□□□□ -0.5
TCOF1-203ENST00000394269 KLHL11Q9NVR0 708 aa11.91□□□□□ -0.5
TCOF1-203ENST00000394269 ADAM22Q9P0K1 906 aa11.91□□□□□ -0.5
TCOF1-203ENST00000394269 ZBTB42B2RXF5 422 aa11.9□□□□□ -0.5
TCOF1-203ENST00000394269 IQCF3P0C7M6 154 aa11.9□□□□□ -0.5
TCOF1-203ENST00000394269 GZMAP12544 262 aa11.9□□□□□ -0.5
TCOF1-203ENST00000394269 CAPN2P17655 700 aa11.9□□□□□ -0.5
TCOF1-203ENST00000394269 RAP1GAPP47736 663 aa11.9□□□□□ -0.5
TCOF1-203ENST00000394269 CDH8P55286 799 aa11.9□□□□□ -0.5
TCOF1-203ENST00000394269 GCNT1Q02742 428 aa11.9□□□□□ -0.5
TCOF1-203ENST00000394269 DUOXA2Q1HG44 320 aa11.9□□□□□ -0.5
TCOF1-203ENST00000394269 WDR72Q3MJ13 1102 aa11.9□□□□□ -0.5
TCOF1-203ENST00000394269 GLE1Q53GS7 698 aaKnown RBP11.9□□□□□ -0.5
TCOF1-203ENST00000394269 SEL1L2Q5TEA6 688 aa11.9□□□□□ -0.5
TCOF1-203ENST00000394269 CCDC62Q6P9F0 684 aa11.9□□□□□ -0.5
TCOF1-203ENST00000394269 OR2W6PQ8NHA6 318 aa11.9□□□□□ -0.5
TCOF1-203ENST00000394269 UBLCP1Q8WVY7 318 aaPredicted RBP11.9□□□□□ -0.5
TCOF1-203ENST00000394269 VTI1AQ96AJ9 217 aa11.9□□□□□ -0.5
TCOF1-203ENST00000394269 LENG1Q96BZ8 264 aaPredicted RBP11.9□□□□□ -0.5
TCOF1-203ENST00000394269 SNX24Q9Y343 169 aa11.9□□□□□ -0.5
TCOF1-203ENST00000394269 UTP11Q9Y3A2 253 aaKnown RBP11.9□□□□□ -0.5
TCOF1-203ENST00000394269 RLFQ13129 1914 aa11.9□□□□□ -0.5
TCOF1-203ENST00000394269 SYF2O95926 243 aaKnown RBP11.9□□□□□ -0.5
TCOF1-203ENST00000394269 LGALS2P05162 132 aa11.9□□□□□ -0.5
TCOF1-203ENST00000394269 BRD2P25440 801 aaKnown RBP11.9□□□□□ -0.5
TCOF1-203ENST00000394269 KCNV1Q6PIU1 500 aa11.9□□□□□ -0.5
TCOF1-203ENST00000394269 PNMA8AQ86V59 439 aaPredicted RBP11.9□□□□□ -0.5
TCOF1-203ENST00000394269 CCDC105Q8IYK2 499 aa11.9□□□□□ -0.5
TCOF1-203ENST00000394269 UHMK1Q8TAS1 419 aaKnown RBP11.9□□□□□ -0.5
TCOF1-203ENST00000394269 CGRRF1Q99675 332 aa11.9□□□□□ -0.5
TCOF1-203ENST00000394269 DNAJC25-GNG10A0A024R161 153 aa11.89□□□□□ -0.51
TCOF1-203ENST00000394269 DYNC1LI2O43237 492 aaPredicted RBP11.89□□□□□ -0.51
TCOF1-203ENST00000394269 HBP1O60381 514 aa11.89□□□□□ -0.51
TCOF1-203ENST00000394269 CETPP11597 493 aa11.89□□□□□ -0.51
TCOF1-203ENST00000394269 VPS41P49754 854 aa11.89□□□□□ -0.51
TCOF1-203ENST00000394269 CLEC16AQ2KHT3 1053 aa11.89□□□□□ -0.51
TCOF1-203ENST00000394269 ZNF572Q7Z3I7 529 aaPredicted RBP11.89□□□□□ -0.51
TCOF1-203ENST00000394269 DDX1Q92499 740 aaKnown RBP11.89□□□□□ -0.51
TCOF1-203ENST00000394269 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.89□□□□□ -0.51
TCOF1-203ENST00000394269 NCANO14594 1321 aa11.89□□□□□ -0.51
TCOF1-203ENST00000394269 OGTO15294 1046 aa11.89□□□□□ -0.51
TCOF1-203ENST00000394269 PLTPP55058 493 aa11.89□□□□□ -0.51
TCOF1-203ENST00000394269 TFDP1Q14186 410 aa11.89□□□□□ -0.51
TCOF1-203ENST00000394269 TRIP13Q15645 432 aaPredicted RBP11.89□□□□□ -0.51
TCOF1-203ENST00000394269 SH2D3CQ8N5H7 860 aa11.89□□□□□ -0.51
TCOF1-203ENST00000394269 AFAP1L1Q8TED9 768 aa11.89□□□□□ -0.51
TCOF1-203ENST00000394269 C1orf54Q8WWF1 131 aa11.89□□□□□ -0.51
TCOF1-203ENST00000394269 GBA2Q9HCG7 927 aaPredicted RBP11.89□□□□□ -0.51
TCOF1-203ENST00000394269 H3BRB1 525 aa11.89□□□□□ -0.51
TCOF1-203ENST00000394269 CLTAP09496 248 aa11.89□□□□□ -0.51
TCOF1-203ENST00000394269 FLT3P36888 993 aa11.89□□□□□ -0.51
TCOF1-203ENST00000394269 DR1Q01658 176 aa11.89□□□□□ -0.51
TCOF1-203ENST00000394269 KIZQ2M2Z5 673 aa11.89□□□□□ -0.51
TCOF1-203ENST00000394269 ZNF699Q32M78 642 aa11.89□□□□□ -0.51
TCOF1-203ENST00000394269 LDLRAD1Q5T700 205 aa11.89□□□□□ -0.51
TCOF1-203ENST00000394269 EMBQ6PCB8 327 aa11.89□□□□□ -0.51
TCOF1-203ENST00000394269 FAM71BQ8TC56 605 aa11.89□□□□□ -0.51
TCOF1-203ENST00000394269 L3MBTL3Q96JM7 780 aaPredicted RBP11.89□□□□□ -0.51
TCOF1-203ENST00000394269 ZSWIM1Q9BR11 485 aa11.89□□□□□ -0.51
TCOF1-203ENST00000394269 APOL6Q9BWW8 343 aa11.89□□□□□ -0.51
TCOF1-203ENST00000394269 TUT1Q9H6E5 874 aaKnown RBP11.89□□□□□ -0.51
TCOF1-203ENST00000394269 TMEM134Q9H6X4 195 aa11.89□□□□□ -0.51
TCOF1-203ENST00000394269 RPF1Q9H9Y2 349 aaKnown RBP11.89□□□□□ -0.51
TCOF1-203ENST00000394269 SETD4Q9NVD3 440 aa11.89□□□□□ -0.51
TCOF1-203ENST00000394269 GTF3C4Q9UKN8 822 aa11.89□□□□□ -0.51
TCOF1-203ENST00000394269 POLIQ9UNA4 740 aa11.89□□□□□ -0.51
TCOF1-203ENST00000394269 RBBP6Q7Z6E9 1792 aaKnown RBP11.89□□□□□ -0.51
TCOF1-203ENST00000394269 CNTNAP2Q9UHC6 1331 aa11.89□□□□□ -0.51
TCOF1-203ENST00000394269 GOLGA6CA6NDK9 693 aa11.88□□□□□ -0.51
TCOF1-203ENST00000394269 SMIM23A6NLE4 172 aa11.88□□□□□ -0.51
TCOF1-203ENST00000394269 AGPSO00116 658 aa11.88□□□□□ -0.51
TCOF1-203ENST00000394269 PIK3R2O00459 728 aa11.88□□□□□ -0.51
TCOF1-203ENST00000394269 GRIN3BO60391 1043 aa11.88□□□□□ -0.51
TCOF1-203ENST00000394269 GOLGA6DP0CG33 693 aa11.88□□□□□ -0.51
TCOF1-203ENST00000394269 ATP1A2P50993 1020 aa11.88□□□□□ -0.51
TCOF1-203ENST00000394269 PLPPR4Q7Z2D5 763 aa11.88□□□□□ -0.51
TCOF1-203ENST00000394269 MCOLN2Q8IZK6 566 aa11.88□□□□□ -0.51
TCOF1-203ENST00000394269 ARL8AQ96BM9 186 aa11.88□□□□□ -0.51
TCOF1-203ENST00000394269 ZIM3Q96PE6 472 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms