RNA–Protein interactions for RNA: ENST00000393551.5

PDLIM7-205, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 1,226 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-205ENST00000393551 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.95■□□□□ 0.78
PDLIM7-205ENST00000393551 NUMBLQ9Y6R0 609 aa19.95■□□□□ 0.78
PDLIM7-205ENST00000393551 TRAPPC3O43617 180 aa19.94■□□□□ 0.78
PDLIM7-205ENST00000393551 POU2F2P09086 479 aa19.94■□□□□ 0.78
PDLIM7-205ENST00000393551 AOC1P19801 751 aa19.94■□□□□ 0.78
PDLIM7-205ENST00000393551 ROR1Q01973 937 aa19.94■□□□□ 0.78
PDLIM7-205ENST00000393551 CUL4AQ13619 759 aa19.94■□□□□ 0.78
PDLIM7-205ENST00000393551 MRPL58Q14197 206 aaKnown RBP19.94■□□□□ 0.78
PDLIM7-205ENST00000393551 SF3A1Q15459 793 aaKnown RBP19.94■□□□□ 0.78
PDLIM7-205ENST00000393551 UVSSAQ2YD98 709 aa19.94■□□□□ 0.78
PDLIM7-205ENST00000393551 VARS2Q5ST30 1063 aaKnown RBP19.94■□□□□ 0.78
PDLIM7-205ENST00000393551 SLC8B1Q6J4K2 584 aa19.94■□□□□ 0.78
PDLIM7-205ENST00000393551 PARM1Q6UWI2 310 aa19.94■□□□□ 0.78
PDLIM7-205ENST00000393551 HAUS6Q7Z4H7 955 aa19.94■□□□□ 0.78
PDLIM7-205ENST00000393551 ITFG1Q8TB96 612 aa19.94■□□□□ 0.78
PDLIM7-205ENST00000393551 ATOH1Q92858 354 aaPredicted RBP19.94■□□□□ 0.78
PDLIM7-205ENST00000393551 FGF13Q92913 245 aa19.94■□□□□ 0.78
PDLIM7-205ENST00000393551 NXPE3Q969Y0 559 aa19.94■□□□□ 0.78
PDLIM7-205ENST00000393551 DNMT3BQ9UBC3 853 aaKnown RBP19.94■□□□□ 0.78
PDLIM7-205ENST00000393551 TUBGCP4Q9UGJ1 667 aa19.94■□□□□ 0.78
PDLIM7-205ENST00000393551 FBXL21Q9UKT6 434 aa19.94■□□□□ 0.78
PDLIM7-205ENST00000393551 RIF1Q5UIP0 2472 aaKnown RBP19.93■□□□□ 0.78
PDLIM7-205ENST00000393551 WDR27A2RRH5 827 aa19.93■□□□□ 0.78
PDLIM7-205ENST00000393551 CLDN3O15551 220 aa19.93■□□□□ 0.78
PDLIM7-205ENST00000393551 SLC26A4O43511 780 aa19.93■□□□□ 0.78
PDLIM7-205ENST00000393551 FAM189A1O60320 539 aa19.93■□□□□ 0.78
PDLIM7-205ENST00000393551 ABLIM3O94929 683 aa19.93■□□□□ 0.78
PDLIM7-205ENST00000393551 CXCL8P10145 99 aa19.93■□□□□ 0.78
PDLIM7-205ENST00000393551 SRFP11831 508 aa19.93■□□□□ 0.78
PDLIM7-205ENST00000393551 PLCG1P19174 1290 aa19.93■□□□□ 0.78
PDLIM7-205ENST00000393551 RPL9P32969 192 aaKnown RBP19.93■□□□□ 0.78
PDLIM7-205ENST00000393551 TNFSF9P41273 254 aa19.93■□□□□ 0.78
PDLIM7-205ENST00000393551 ZNF131P52739 623 aa19.93■□□□□ 0.78
PDLIM7-205ENST00000393551 SPAG1Q07617 926 aa19.93■□□□□ 0.78
PDLIM7-205ENST00000393551 DHX8Q14562 1220 aaKnown RBP19.93■□□□□ 0.78
PDLIM7-205ENST00000393551 KARSQ15046 597 aaKnown RBP19.93■□□□□ 0.78
PDLIM7-205ENST00000393551 ZBTB41Q5SVQ8 909 aa19.93■□□□□ 0.78
PDLIM7-205ENST00000393551 BRAPQ7Z569 592 aa19.93■□□□□ 0.78
PDLIM7-205ENST00000393551 GPBP1Q86WP2 473 aa19.93■□□□□ 0.78
PDLIM7-205ENST00000393551 GPR152Q8TDT2 470 aa19.93■□□□□ 0.78
PDLIM7-205ENST00000393551 FIZ1Q96SL8 496 aa19.93■□□□□ 0.78
PDLIM7-205ENST00000393551 KCNG1Q9UIX4 513 aa19.93■□□□□ 0.78
PDLIM7-205ENST00000393551 CDH7Q9ULB5 785 aa19.93■□□□□ 0.78
PDLIM7-205ENST00000393551 ODF2LQ9ULJ1 636 aa19.93■□□□□ 0.78
PDLIM7-205ENST00000393551 POLIQ9UNA4 740 aa19.93■□□□□ 0.78
PDLIM7-205ENST00000393551 COL4A3Q01955 1670 aa19.93■□□□□ 0.78
PDLIM7-205ENST00000393551 TTC26A0AVF1 554 aa19.92■□□□□ 0.78
PDLIM7-205ENST00000393551 SYN3O14994 580 aa19.92■□□□□ 0.78
PDLIM7-205ENST00000393551 UBA7P41226 1012 aa19.92■□□□□ 0.78
PDLIM7-205ENST00000393551 MCM6Q14566 821 aa19.92■□□□□ 0.78
PDLIM7-205ENST00000393551 ZBTB6Q15916 424 aa19.92■□□□□ 0.78
PDLIM7-205ENST00000393551 USP49Q70CQ1 688 aa19.92■□□□□ 0.78
PDLIM7-205ENST00000393551 ZNF461Q8TAF7 563 aa19.92■□□□□ 0.78
PDLIM7-205ENST00000393551 RAD54LQ92698 747 aa19.92■□□□□ 0.78
PDLIM7-205ENST00000393551 LARSQ9P2J5 1176 aaKnown RBP19.92■□□□□ 0.78
PDLIM7-205ENST00000393551 CA14Q9ULX7 337 aa19.92■□□□□ 0.78
PDLIM7-205ENST00000393551 ZFP37Q9Y6Q3 630 aaPredicted RBP19.92■□□□□ 0.78
PDLIM7-205ENST00000393551 ANK1P16157 1881 aa19.91■□□□□ 0.78
PDLIM7-205ENST00000393551 XYLBO75191 536 aa19.91■□□□□ 0.78
PDLIM7-205ENST00000393551 LONP1P36776 959 aaKnown RBP19.91■□□□□ 0.78
PDLIM7-205ENST00000393551 PTPAQ15257 358 aa19.91■□□□□ 0.78
PDLIM7-205ENST00000393551 SLC5A9Q2M3M2 681 aa19.91■□□□□ 0.78
PDLIM7-205ENST00000393551 SLC39A4Q6P5W5 647 aa19.91■□□□□ 0.78
PDLIM7-205ENST00000393551 RTL10Q7L3V2 364 aa19.91■□□□□ 0.78
PDLIM7-205ENST00000393551 CALML4Q96GE6 196 aa19.91■□□□□ 0.78
PDLIM7-205ENST00000393551 SUSD3Q96L08 255 aa19.91■□□□□ 0.78
PDLIM7-205ENST00000393551 TBX20Q9UMR3 447 aa19.91■□□□□ 0.78
PDLIM7-205ENST00000393551 CLIC4Q9Y696 253 aa19.91■□□□□ 0.78
PDLIM7-205ENST00000393551 ARHGEF37A1IGU5 675 aa19.9■□□□□ 0.78
PDLIM7-205ENST00000393551 SEC24AO95486 1093 aa19.9■□□□□ 0.78
PDLIM7-205ENST00000393551 PIGRP01833 764 aa19.9■□□□□ 0.78
PDLIM7-205ENST00000393551 PABPC1LQ4VXU2 614 aaKnown RBP19.9■□□□□ 0.78
PDLIM7-205ENST00000393551 NPAS3Q8IXF0 933 aa19.9■□□□□ 0.78
PDLIM7-205ENST00000393551 CCDC105Q8IYK2 499 aa19.9■□□□□ 0.78
PDLIM7-205ENST00000393551 EPSTI1Q96J88 318 aa19.9■□□□□ 0.78
PDLIM7-205ENST00000393551 IRF2BPLQ9H1B7 796 aa19.9■□□□□ 0.78
PDLIM7-205ENST00000393551 SLC2A4RGQ9NR83 387 aa19.9■□□□□ 0.78
PDLIM7-205ENST00000393551 FBXL5Q9UKA1 691 aa19.9■□□□□ 0.78
PDLIM7-205ENST00000393551 NUB1Q9Y5A7 615 aa19.9■□□□□ 0.78
PDLIM7-205ENST00000393551 FRYLO94915 3013 aa19.9■□□□□ 0.78
PDLIM7-205ENST00000393551 PTPRZ1P23471 2315 aaPredicted RBP19.9■□□□□ 0.78
PDLIM7-205ENST00000393551 NRG2O14511 850 aaPredicted RBP19.89■□□□□ 0.77
PDLIM7-205ENST00000393551 BMP15O95972 392 aa19.89■□□□□ 0.77
PDLIM7-205ENST00000393551 ADRB2P07550 413 aa19.89■□□□□ 0.77
PDLIM7-205ENST00000393551 CLTAP09496 248 aa19.89■□□□□ 0.77
PDLIM7-205ENST00000393551 ATF2P15336 505 aa19.89■□□□□ 0.77
PDLIM7-205ENST00000393551 ARPP19P56211 112 aa19.89■□□□□ 0.77
PDLIM7-205ENST00000393551 GPC5P78333 572 aa19.89■□□□□ 0.77
PDLIM7-205ENST00000393551 ENOX2Q16206 610 aaKnown RBP19.89■□□□□ 0.77
PDLIM7-205ENST00000393551 SPECC1Q5M775 1068 aa19.89■□□□□ 0.77
PDLIM7-205ENST00000393551 FAM173BQ6P4H8 233 aa19.89■□□□□ 0.77
PDLIM7-205ENST00000393551 MYCT1Q8N699 235 aa19.89■□□□□ 0.77
PDLIM7-205ENST00000393551 DDX12PQ92771 950 aa19.89■□□□□ 0.77
PDLIM7-205ENST00000393551 BICD1Q96G01 975 aa19.89■□□□□ 0.77
PDLIM7-205ENST00000393551 RTP3Q9BQQ7 232 aa19.89■□□□□ 0.77
PDLIM7-205ENST00000393551 CCSER1Q9C0I3 900 aa19.89■□□□□ 0.77
PDLIM7-205ENST00000393551 PLEKHA5Q9HAU0 1116 aa19.89■□□□□ 0.77
PDLIM7-205ENST00000393551 PARVGQ9HBI0 331 aa19.89■□□□□ 0.77
PDLIM7-205ENST00000393551 VPS37CA5D8V6 355 aaPredicted RBP19.88■□□□□ 0.77
PDLIM7-205ENST00000393551 LACTBL1A8MY62 500 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms