RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 EPAS1Q99814 870 aa17.37■□□□□ 0.37
PHTF1-205ENST00000393357 KIAA1586Q9HCI6 787 aa17.37■□□□□ 0.37
PHTF1-205ENST00000393357 WRAP73Q9P2S5 460 aaPredicted RBP17.37■□□□□ 0.37
PHTF1-205ENST00000393357 NUP98P52948 1817 aa17.37■□□□□ 0.37
PHTF1-205ENST00000393357 NCANO14594 1321 aa17.37■□□□□ 0.37
PHTF1-205ENST00000393357 PARP4Q9UKK3 1724 aaKnown RBP17.37■□□□□ 0.37
PHTF1-205ENST00000393357 SNED1Q8TER0 1413 aa17.36■□□□□ 0.37
PHTF1-205ENST00000393357 ENO1P06733 434 aaKnown RBP17.36■□□□□ 0.37
PHTF1-205ENST00000393357 SOX10P56693 466 aa17.36■□□□□ 0.37
PHTF1-205ENST00000393357 MRPS35P82673 323 aaKnown RBP17.36■□□□□ 0.37
PHTF1-205ENST00000393357 MAPK6Q16659 721 aa17.36■□□□□ 0.37
PHTF1-205ENST00000393357 ARHGAP27Q6ZUM4 889 aa17.36■□□□□ 0.37
PHTF1-205ENST00000393357 SLFN12Q8IYM2 578 aa17.36■□□□□ 0.37
PHTF1-205ENST00000393357 CCDC124Q96CT7 223 aaKnown RBP17.36■□□□□ 0.37
PHTF1-205ENST00000393357 CADM1Q9BY67 442 aaKnown RBP17.36■□□□□ 0.37
PHTF1-205ENST00000393357 ROPN1BQ9BZX4 212 aaPredicted RBP17.36■□□□□ 0.37
PHTF1-205ENST00000393357 SMYD3Q9H7B4 428 aa17.36■□□□□ 0.37
PHTF1-205ENST00000393357 ROPN1Q9HAT0 212 aaPredicted RBP17.36■□□□□ 0.37
PHTF1-205ENST00000393357 MEIS2O14770 477 aa17.36■□□□□ 0.37
PHTF1-205ENST00000393357 AMPD1P23109 780 aa17.36■□□□□ 0.37
PHTF1-205ENST00000393357 MXI1P50539 228 aa17.36■□□□□ 0.37
PHTF1-205ENST00000393357 GPSM2P81274 684 aa17.36■□□□□ 0.37
PHTF1-205ENST00000393357 PDIA2Q13087 525 aaKnown RBP17.36■□□□□ 0.37
PHTF1-205ENST00000393357 PPFIBP2Q8ND30 876 aa17.36■□□□□ 0.37
PHTF1-205ENST00000393357 ASAP3Q8TDY4 903 aa17.36■□□□□ 0.37
PHTF1-205ENST00000393357 EPS8L1Q8TE68 723 aa17.36■□□□□ 0.37
PHTF1-205ENST00000393357 STRCP1A6NGW2 1772 aa17.36■□□□□ 0.37
PHTF1-205ENST00000393357 ARHGEF35A5YM69 484 aa17.36■□□□□ 0.37
PHTF1-205ENST00000393357 H3BRJ5 948 aa17.36■□□□□ 0.37
PHTF1-205ENST00000393357 SCNN1BP51168 640 aa17.36■□□□□ 0.37
PHTF1-205ENST00000393357 VAMP7P51809 220 aa17.36■□□□□ 0.37
PHTF1-205ENST00000393357 DRG2P55039 364 aaKnown RBP17.36■□□□□ 0.37
PHTF1-205ENST00000393357 CBWD2Q8IUF1 395 aa17.36■□□□□ 0.37
PHTF1-205ENST00000393357 AGGF1Q8N302 714 aaeCLIP17.36■□□□□ 0.37
PHTF1-205ENST00000393357 CCDC134Q9H6E4 229 aa17.36■□□□□ 0.37
PHTF1-205ENST00000393357 ZNF395Q9H8N7 513 aaPredicted RBP17.36■□□□□ 0.37
PHTF1-205ENST00000393357 SLC17A7Q9P2U7 560 aa17.36■□□□□ 0.37
PHTF1-205ENST00000393357 NEU2Q9Y3R4 380 aa17.36■□□□□ 0.37
PHTF1-205ENST00000393357 GAS7O60861 476 aa17.35■□□□□ 0.37
PHTF1-205ENST00000393357 ESRRAP11474 423 aaPredicted RBP17.35■□□□□ 0.37
PHTF1-205ENST00000393357 SIX1Q15475 284 aaPredicted RBP17.35■□□□□ 0.37
PHTF1-205ENST00000393357 POMGNT1Q8WZA1 660 aa17.35■□□□□ 0.37
PHTF1-205ENST00000393357 USP6NLQ92738 828 aa17.35■□□□□ 0.37
PHTF1-205ENST00000393357 WNT8AQ9H1J5 351 aa17.35■□□□□ 0.37
PHTF1-205ENST00000393357 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.35■□□□□ 0.37
PHTF1-205ENST00000393357 STOML1Q9UBI4 398 aa17.35■□□□□ 0.37
PHTF1-205ENST00000393357 SLC16A4O15374 487 aa17.35■□□□□ 0.37
PHTF1-205ENST00000393357 RHBDL3P58872 404 aa17.35■□□□□ 0.37
PHTF1-205ENST00000393357 RASA3Q14644 834 aa17.35■□□□□ 0.37
PHTF1-205ENST00000393357 FYB2Q5VWT5 728 aa17.35■□□□□ 0.37
PHTF1-205ENST00000393357 FOXB2Q5VYV0 432 aa17.35■□□□□ 0.37
PHTF1-205ENST00000393357 MFSD5Q6N075 450 aa17.35■□□□□ 0.37
PHTF1-205ENST00000393357 CROCCP2Q86T23 111 aa17.35■□□□□ 0.37
PHTF1-205ENST00000393357 RBBP8NLQ8NC74 664 aaPredicted RBP17.35■□□□□ 0.37
PHTF1-205ENST00000393357 FBXO27Q8NI29 283 aa17.35■□□□□ 0.37
PHTF1-205ENST00000393357 SHKBP1Q8TBC3 707 aa17.35■□□□□ 0.37
PHTF1-205ENST00000393357 KIFAP3Q92845 792 aa17.35■□□□□ 0.37
PHTF1-205ENST00000393357 MAK16Q9BXY0 300 aaKnown RBP17.35■□□□□ 0.37
PHTF1-205ENST00000393357 PCMTD2Q9NV79 361 aa17.35■□□□□ 0.37
PHTF1-205ENST00000393357 RHBDL2Q9NX52 303 aa17.35■□□□□ 0.37
PHTF1-205ENST00000393357 DIS3Q9Y2L1 958 aaKnown RBP17.35■□□□□ 0.37
PHTF1-205ENST00000393357 CCNB1P14635 433 aa17.34■□□□□ 0.37
PHTF1-205ENST00000393357 TCF4P15884 667 aa17.34■□□□□ 0.37
PHTF1-205ENST00000393357 ARSEP51690 589 aa17.34■□□□□ 0.37
PHTF1-205ENST00000393357 RNF43Q68DV7 783 aa17.34■□□□□ 0.37
PHTF1-205ENST00000393357 LRRN4Q8WUT4 740 aa17.34■□□□□ 0.37
PHTF1-205ENST00000393357 LRMDAQ9H2I8 198 aa17.34■□□□□ 0.37
PHTF1-205ENST00000393357 PACSIN3Q9UKS6 424 aa17.34■□□□□ 0.37
PHTF1-205ENST00000393357 NENFQ9UMX5 172 aa17.34■□□□□ 0.37
PHTF1-205ENST00000393357 ZMYM2Q9UBW7 1377 aa17.34■□□□□ 0.37
PHTF1-205ENST00000393357 MEI4A8MW99 385 aa17.34■□□□□ 0.37
PHTF1-205ENST00000393357 HAUS5O94927 633 aa17.34■□□□□ 0.37
PHTF1-205ENST00000393357 CYP3A4P08684 503 aa17.34■□□□□ 0.37
PHTF1-205ENST00000393357 SKIP12755 728 aa17.34■□□□□ 0.37
PHTF1-205ENST00000393357 ITIH2P19823 946 aa17.34■□□□□ 0.37
PHTF1-205ENST00000393357 CCNFP41002 786 aa17.34■□□□□ 0.37
PHTF1-205ENST00000393357 SPIRE1Q08AE8 756 aa17.34■□□□□ 0.37
PHTF1-205ENST00000393357 TRAIPQ9BWF2 469 aa17.34■□□□□ 0.37
PHTF1-205ENST00000393357 DAGLAQ9Y4D2 1042 aa17.34■□□□□ 0.37
PHTF1-205ENST00000393357 AHCYL1O43865 530 aa17.34■□□□□ 0.37
PHTF1-205ENST00000393357 DCTN3O75935 186 aa17.34■□□□□ 0.37
PHTF1-205ENST00000393357 FESP07332 822 aa17.34■□□□□ 0.37
PHTF1-205ENST00000393357 ZNF394Q53GI3 561 aa17.34■□□□□ 0.37
PHTF1-205ENST00000393357 CYFIP1Q7L576 1253 aa17.34■□□□□ 0.37
PHTF1-205ENST00000393357 ZNF720Q7Z2F6 126 aa17.34■□□□□ 0.37
PHTF1-205ENST00000393357 ANKS1BQ7Z6G8 1248 aa17.34■□□□□ 0.37
PHTF1-205ENST00000393357 ZNF75CPQ92670 426 aaPredicted RBP17.34■□□□□ 0.37
PHTF1-205ENST00000393357 SEMA4DQ92854 862 aa17.34■□□□□ 0.37
PHTF1-205ENST00000393357 KREMEN1Q96MU8 473 aa17.34■□□□□ 0.37
PHTF1-205ENST00000393357 UBE2OQ9C0C9 1292 aaKnown RBP17.34■□□□□ 0.37
PHTF1-205ENST00000393357 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.34■□□□□ 0.37
PHTF1-205ENST00000393357 SGK1O00141 431 aa17.33■□□□□ 0.37
PHTF1-205ENST00000393357 SLITRK3O94933 977 aa17.33■□□□□ 0.37
PHTF1-205ENST00000393357 CFHP08603 1231 aa17.33■□□□□ 0.37
PHTF1-205ENST00000393357 DEUP1Q05D60 604 aa17.33■□□□□ 0.37
PHTF1-205ENST00000393357 LRRC74BQ6ZQY2 392 aa17.33■□□□□ 0.37
PHTF1-205ENST00000393357 RINLQ6ZS11 566 aa17.33■□□□□ 0.37
PHTF1-205ENST00000393357 ETNPPLQ8TBG4 499 aa17.33■□□□□ 0.37
PHTF1-205ENST00000393357 TMEM121Q9BTD3 319 aa17.33■□□□□ 0.37
PHTF1-205ENST00000393357 GINM1Q9NU53 330 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms