RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 ERICH4A6NGS2 130 aa16.08■□□□□ 0.16
MKS1-202ENST00000393119 ASAP2O43150 1006 aa16.08■□□□□ 0.16
MKS1-202ENST00000393119 GPR32O75388 356 aa16.08■□□□□ 0.16
MKS1-202ENST00000393119 WEE2P0C1S8 567 aa16.08■□□□□ 0.16
MKS1-202ENST00000393119 CYP2C9P11712 490 aa16.08■□□□□ 0.16
MKS1-202ENST00000393119 ABCD1P33897 745 aa16.08■□□□□ 0.16
MKS1-202ENST00000393119 PSEN2P49810 448 aa16.08■□□□□ 0.16
MKS1-202ENST00000393119 HNRNPH2P55795 449 aaKnown RBP16.08■□□□□ 0.16
MKS1-202ENST00000393119 NOP14P78316 857 aaKnown RBP16.08■□□□□ 0.16
MKS1-202ENST00000393119 ORC1Q13415 861 aa16.08■□□□□ 0.16
MKS1-202ENST00000393119 FSCN1Q16658 493 aaKnown RBP16.08■□□□□ 0.16
MKS1-202ENST00000393119 USP37Q86T82 979 aa16.08■□□□□ 0.16
MKS1-202ENST00000393119 PASD1Q8IV76 773 aa16.08■□□□□ 0.16
MKS1-202ENST00000393119 EXOC8Q8IYI6 725 aa16.08■□□□□ 0.16
MKS1-202ENST00000393119 SLC35G2Q8TBE7 412 aa16.08■□□□□ 0.16
MKS1-202ENST00000393119 BTBD6Q96KE9 485 aa16.08■□□□□ 0.16
MKS1-202ENST00000393119 EIF2AQ9BY44 585 aaKnown RBP16.08■□□□□ 0.16
MKS1-202ENST00000393119 SNX12Q9UMY4 172 aa16.08■□□□□ 0.16
MKS1-202ENST00000393119 POLIQ9UNA4 740 aa16.08■□□□□ 0.16
MKS1-202ENST00000393119 TNFSF13BQ9Y275 285 aa16.08■□□□□ 0.16
MKS1-202ENST00000393119 JRKLQ9Y4A0 524 aa16.08■□□□□ 0.16
MKS1-202ENST00000393119 KRT19P08727 400 aa16.07■□□□□ 0.16
MKS1-202ENST00000393119 ACO1P21399 889 aaKnown RBP16.07■□□□□ 0.16
MKS1-202ENST00000393119 RAP1GAPP47736 663 aa16.07■□□□□ 0.16
MKS1-202ENST00000393119 WDR44Q5JSH3 913 aa16.07■□□□□ 0.16
MKS1-202ENST00000393119 TMEM270Q6UE05 265 aa16.07■□□□□ 0.16
MKS1-202ENST00000393119 VPS36Q86VN1 386 aa16.07■□□□□ 0.16
MKS1-202ENST00000393119 CREG2Q8IUH2 290 aa16.07■□□□□ 0.16
MKS1-202ENST00000393119 OSBPL9Q96SU4 736 aa16.07■□□□□ 0.16
MKS1-202ENST00000393119 PRMT7Q9NVM4 692 aaPredicted RBP16.07■□□□□ 0.16
MKS1-202ENST00000393119 EFCAB8A8MWE9 144 aa16.07■□□□□ 0.16
MKS1-202ENST00000393119 CCND3P30281 292 aaPredicted RBP16.07■□□□□ 0.16
MKS1-202ENST00000393119 HOXA11P31270 313 aaPredicted RBP16.07■□□□□ 0.16
MKS1-202ENST00000393119 C2orf54Q08AI8 447 aa16.07■□□□□ 0.16
MKS1-202ENST00000393119 SLC10A6Q3KNW5 377 aa16.07■□□□□ 0.16
MKS1-202ENST00000393119 JADE1Q6IE81 842 aa16.07■□□□□ 0.16
MKS1-202ENST00000393119 OSBPL7Q9BZF2 842 aa16.07■□□□□ 0.16
MKS1-202ENST00000393119 AP5M1Q9H0R1 490 aa16.07■□□□□ 0.16
MKS1-202ENST00000393119 PLEKHA4Q9H4M7 779 aa16.07■□□□□ 0.16
MKS1-202ENST00000393119 TRPA1O75762 1119 aa16.06■□□□□ 0.16
MKS1-202ENST00000393119 CUL2Q13617 745 aa16.06■□□□□ 0.16
MKS1-202ENST00000393119 GNASQ5JWF2 1037 aa16.06■□□□□ 0.16
MKS1-202ENST00000393119 TPCN2Q8NHX9 752 aa16.06■□□□□ 0.16
MKS1-202ENST00000393119 SOCS4Q8WXH5 440 aa16.06■□□□□ 0.16
MKS1-202ENST00000393119 CPA5Q8WXQ8 436 aa16.06■□□□□ 0.16
MKS1-202ENST00000393119 WNT8BQ93098 351 aa16.06■□□□□ 0.16
MKS1-202ENST00000393119 ALS2CR12Q96Q35 445 aa16.06■□□□□ 0.16
MKS1-202ENST00000393119 PCDHGC5Q9Y5F6 944 aa16.06■□□□□ 0.16
MKS1-202ENST00000393119 COL1A2P08123 1366 aa16.06■□□□□ 0.16
MKS1-202ENST00000393119 KIAA0391O15091 583 aaKnown RBP16.06■□□□□ 0.16
MKS1-202ENST00000393119 CLTAP09496 248 aa16.06■□□□□ 0.16
MKS1-202ENST00000393119 RFX1P22670 979 aa16.06■□□□□ 0.16
MKS1-202ENST00000393119 CDH8P55286 799 aa16.06■□□□□ 0.16
MKS1-202ENST00000393119 PURAQ00577 322 aaKnown RBP16.06■□□□□ 0.16
MKS1-202ENST00000393119 CACNB2Q08289 660 aaPredicted RBP16.06■□□□□ 0.16
MKS1-202ENST00000393119 RNF10Q8N5U6 811 aaKnown RBP16.06■□□□□ 0.16
MKS1-202ENST00000393119 LRRC57Q8N9N7 239 aa16.06■□□□□ 0.16
MKS1-202ENST00000393119 CAPNS2Q96L46 248 aa16.06■□□□□ 0.16
MKS1-202ENST00000393119 TSPYL1Q9H0U9 437 aa16.06■□□□□ 0.16
MKS1-202ENST00000393119 RPF1Q9H9Y2 349 aaKnown RBP16.06■□□□□ 0.16
MKS1-202ENST00000393119 NXF1Q9UBU9 619 aaKnown RBP16.06■□□□□ 0.16
MKS1-202ENST00000393119 SIX4Q9UIU6 781 aa16.06■□□□□ 0.16
MKS1-202ENST00000393119 PCDHB4Q9Y5E5 795 aa16.06■□□□□ 0.16
MKS1-202ENST00000393119 VGLL3A8MV65 326 aa16.05■□□□□ 0.16
MKS1-202ENST00000393119 ATP8B1O43520 1251 aa16.05■□□□□ 0.16
MKS1-202ENST00000393119 ZEB2O60315 1214 aa16.05■□□□□ 0.16
MKS1-202ENST00000393119 BUB1BO60566 1050 aaPredicted RBP16.05■□□□□ 0.16
MKS1-202ENST00000393119 ERLIN2O94905 339 aa16.05■□□□□ 0.16
MKS1-202ENST00000393119 ADAM17P78536 824 aa16.05■□□□□ 0.16
MKS1-202ENST00000393119 GCNT1Q02742 428 aa16.05■□□□□ 0.16
MKS1-202ENST00000393119 DUOXA2Q1HG44 320 aa16.05■□□□□ 0.16
MKS1-202ENST00000393119 WDR49Q8IV35 697 aa16.05■□□□□ 0.16
MKS1-202ENST00000393119 PNKPQ96T60 521 aa16.05■□□□□ 0.16
MKS1-202ENST00000393119 APOL6Q9BWW8 343 aa16.05■□□□□ 0.16
MKS1-202ENST00000393119 NFKBIZQ9BYH8 718 aa16.05■□□□□ 0.16
MKS1-202ENST00000393119 ANKZF1Q9H8Y5 726 aa16.05■□□□□ 0.16
MKS1-202ENST00000393119 NRCAMQ92823 1304 aa16.05■□□□□ 0.16
MKS1-202ENST00000393119 TMEM110-MUSTN1A8MSY1 372 aa16.05■□□□□ 0.16
MKS1-202ENST00000393119 HAS3O00219 553 aa16.05■□□□□ 0.16
MKS1-202ENST00000393119 ZMYND10O75800 440 aa16.05■□□□□ 0.16
MKS1-202ENST00000393119 NPTXRO95502 500 aa16.05■□□□□ 0.16
MKS1-202ENST00000393119 TMEM191BP0C7N4 346 aa16.05■□□□□ 0.16
MKS1-202ENST00000393119 CYBAP13498 195 aa16.05■□□□□ 0.16
MKS1-202ENST00000393119 FCGRTP55899 365 aa16.05■□□□□ 0.16
MKS1-202ENST00000393119 MEI1Q5TIA1 1274 aa16.05■□□□□ 0.16
MKS1-202ENST00000393119 C1orf127Q8N9H9 656 aa16.05■□□□□ 0.16
MKS1-202ENST00000393119 XYLT2Q9H1B5 865 aa16.05■□□□□ 0.16
MKS1-202ENST00000393119 LUC7LQ9NQ29 371 aaKnown RBP16.05■□□□□ 0.16
MKS1-202ENST00000393119 ZNF236Q9UL36 1845 aa16.04■□□□□ 0.16
MKS1-202ENST00000393119 ANO9A1A5B4 782 aa16.04■□□□□ 0.16
MKS1-202ENST00000393119 CTAGE15A4D2H0 777 aa16.04■□□□□ 0.16
MKS1-202ENST00000393119 SEC31AO94979 1220 aaKnown RBP16.04■□□□□ 0.16
MKS1-202ENST00000393119 CTAGE8P0CG41 777 aa16.04■□□□□ 0.16
MKS1-202ENST00000393119 AKR1A1P14550 325 aa16.04■□□□□ 0.16
MKS1-202ENST00000393119 CPT1AP50416 773 aa16.04■□□□□ 0.16
MKS1-202ENST00000393119 PDE6CP51160 858 aa16.04■□□□□ 0.16
MKS1-202ENST00000393119 WHAMMP3Q1A5X7 153 aa16.04■□□□□ 0.16
MKS1-202ENST00000393119 GLRA4Q5JXX5 417 aa16.04■□□□□ 0.16
MKS1-202ENST00000393119 DAAM2Q86T65 1068 aa16.04■□□□□ 0.16
MKS1-202ENST00000393119 CTAGE6Q86UF2 777 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms