RNA–Protein interactions for RNA: ENST00000392597.5

PTPN11-202, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 1 (best) BASIC

Gene PTPN11, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-202ENST00000392597 DMGDHQ9UI17 866 aaKnown RBP21.52■■□□□ 1.03
PTPN11-202ENST00000392597 TNFSF13BQ9Y275 285 aa21.52■■□□□ 1.03
PTPN11-202ENST00000392597 INO80B-WBP1J3KQ70 363 aa21.51■■□□□ 1.03
PTPN11-202ENST00000392597 CASP8Q14790 479 aa21.51■■□□□ 1.03
PTPN11-202ENST00000392597 RPS6KC1Q96S38 1066 aa21.51■■□□□ 1.03
PTPN11-202ENST00000392597 TINF2Q9BSI4 451 aa21.51■■□□□ 1.03
PTPN11-202ENST00000392597 C16orf70Q9BSU1 422 aa21.51■■□□□ 1.03
PTPN11-202ENST00000392597 INO80BQ9C086 356 aaPredicted RBP21.51■■□□□ 1.03
PTPN11-202ENST00000392597 VIPAS39Q9H9C1 493 aa21.51■■□□□ 1.03
PTPN11-202ENST00000392597 APOBEC3GQ9HC16 384 aaKnown RBP21.51■■□□□ 1.03
PTPN11-202ENST00000392597 DDX3YO15523 660 aaKnown RBP21.5■■□□□ 1.03
PTPN11-202ENST00000392597 DUOXA2Q1HG44 320 aa21.5■■□□□ 1.03
PTPN11-202ENST00000392597 SEZ6Q53EL9 994 aa21.5■■□□□ 1.03
PTPN11-202ENST00000392597 IQSEC1Q6DN90 963 aa21.5■■□□□ 1.03
PTPN11-202ENST00000392597 HDAC7Q8WUI4 952 aa21.5■■□□□ 1.03
PTPN11-202ENST00000392597 CCDC188H7C350 402 aa21.49■■□□□ 1.03
PTPN11-202ENST00000392597 CA12O43570 354 aa21.49■■□□□ 1.03
PTPN11-202ENST00000392597 ASS1P00966 412 aaKnown RBP21.49■■□□□ 1.03
PTPN11-202ENST00000392597 TMOD1P28289 359 aa21.49■■□□□ 1.03
PTPN11-202ENST00000392597 POU5F1Q01860 360 aaKnown RBP21.49■■□□□ 1.03
PTPN11-202ENST00000392597 ZNF568Q3ZCX4 644 aa21.49■■□□□ 1.03
PTPN11-202ENST00000392597 SPOPLQ6IQ16 392 aa21.49■■□□□ 1.03
PTPN11-202ENST00000392597 TRIM72Q6ZMU5 477 aa21.49■■□□□ 1.03
PTPN11-202ENST00000392597 ELMO3Q96BJ8 720 aa21.49■■□□□ 1.03
PTPN11-202ENST00000392597 TRIM11Q96F44 468 aa21.49■■□□□ 1.03
PTPN11-202ENST00000392597 IFT122Q9HBG6 1241 aa21.49■■□□□ 1.03
PTPN11-202ENST00000392597 ZFYVE28Q9HCC9 887 aa21.49■■□□□ 1.03
PTPN11-202ENST00000392597 NOC2LQ9Y3T9 749 aaKnown RBP21.49■■□□□ 1.03
PTPN11-202ENST00000392597 ALG6Q9Y672 507 aa21.49■■□□□ 1.03
PTPN11-202ENST00000392597 B4GALT4O60513 344 aa21.49■■□□□ 1.03
PTPN11-202ENST00000392597 GJB1P08034 283 aa21.49■■□□□ 1.03
PTPN11-202ENST00000392597 UNGP13051 313 aaPredicted RBP21.49■■□□□ 1.03
PTPN11-202ENST00000392597 GPS2Q13227 327 aa21.49■■□□□ 1.03
PTPN11-202ENST00000392597 ACVR2BQ13705 512 aa21.49■■□□□ 1.03
PTPN11-202ENST00000392597 SMC1AQ14683 1233 aaKnown RBP21.49■■□□□ 1.03
PTPN11-202ENST00000392597 PPP1R2P3Q6NXS1 205 aa21.49■■□□□ 1.03
PTPN11-202ENST00000392597 ZNF653Q96CK0 615 aa21.49■■□□□ 1.03
PTPN11-202ENST00000392597 ACBD3Q9H3P7 528 aa21.49■■□□□ 1.03
PTPN11-202ENST00000392597 NUB1Q9Y5A7 615 aa21.49■■□□□ 1.03
PTPN11-202ENST00000392597 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.48■■□□□ 1.03
PTPN11-202ENST00000392597 H3BRB1 525 aa21.48■■□□□ 1.03
PTPN11-202ENST00000392597 ZMYND10O75800 440 aa21.48■■□□□ 1.03
PTPN11-202ENST00000392597 MYBL1P10243 752 aa21.48■■□□□ 1.03
PTPN11-202ENST00000392597 IGBP1P78318 339 aa21.48■■□□□ 1.03
PTPN11-202ENST00000392597 IFT20Q8IY31 132 aa21.48■■□□□ 1.03
PTPN11-202ENST00000392597 ZNF564Q8TBZ8 553 aaPredicted RBP21.48■■□□□ 1.03
PTPN11-202ENST00000392597 AENQ8WTP8 325 aaKnown RBP21.48■■□□□ 1.03
PTPN11-202ENST00000392597 KRT12Q99456 494 aa21.48■■□□□ 1.03
PTPN11-202ENST00000392597 NAP1L3Q99457 506 aaPredicted RBP21.48■■□□□ 1.03
PTPN11-202ENST00000392597 CFHR5Q9BXR6 569 aa21.48■■□□□ 1.03
PTPN11-202ENST00000392597 TUT1Q9H6E5 874 aaKnown RBP21.48■■□□□ 1.03
PTPN11-202ENST00000392597 MINDY3Q9H8M7 445 aa21.48■■□□□ 1.03
PTPN11-202ENST00000392597 AVENQ9NQS1 362 aaPredicted RBP21.48■■□□□ 1.03
PTPN11-202ENST00000392597 PCDHB4Q9Y5E5 795 aa21.48■■□□□ 1.03
PTPN11-202ENST00000392597 IL18RAPO95256 599 aa21.47■■□□□ 1.03
PTPN11-202ENST00000392597 HOXC6P09630 235 aa21.47■■□□□ 1.03
PTPN11-202ENST00000392597 ZNF286BP0CG31 522 aa21.47■■□□□ 1.03
PTPN11-202ENST00000392597 SMPD1P17405 629 aa21.47■■□□□ 1.03
PTPN11-202ENST00000392597 CRHR2Q13324 411 aa21.47■■□□□ 1.03
PTPN11-202ENST00000392597 PTPROQ16827 1216 aa21.47■■□□□ 1.03
PTPN11-202ENST00000392597 UBL4BQ8N7F7 174 aa21.47■■□□□ 1.03
PTPN11-202ENST00000392597 NUP85Q9BW27 656 aa21.47■■□□□ 1.03
PTPN11-202ENST00000392597 MTMR12Q9C0I1 747 aa21.47■■□□□ 1.03
PTPN11-202ENST00000392597 CDT1Q9H211 546 aa21.47■■□□□ 1.03
PTPN11-202ENST00000392597 GDF3Q9NR23 364 aa21.47■■□□□ 1.03
PTPN11-202ENST00000392597 ANK1P16157 1881 aa21.47■■□□□ 1.03
PTPN11-202ENST00000392597 B4GALT5O43286 388 aa21.47■■□□□ 1.03
PTPN11-202ENST00000392597 CYP1A1P04798 512 aaPredicted RBP21.47■■□□□ 1.03
PTPN11-202ENST00000392597 MMP3P08254 477 aa21.47■■□□□ 1.03
PTPN11-202ENST00000392597 MYBL2P10244 700 aa21.47■■□□□ 1.03
PTPN11-202ENST00000392597 RNASE9P60153 205 aaKnown RBP21.47■■□□□ 1.03
PTPN11-202ENST00000392597 SLC7A5Q01650 507 aa21.47■■□□□ 1.03
PTPN11-202ENST00000392597 CENPCQ03188 943 aa21.47■■□□□ 1.03
PTPN11-202ENST00000392597 GABPB1Q06547 395 aaPredicted RBP21.47■■□□□ 1.03
PTPN11-202ENST00000392597 DGKDQ16760 1214 aa21.47■■□□□ 1.03
PTPN11-202ENST00000392597 TMEM132AQ24JP5 1023 aa21.47■■□□□ 1.03
PTPN11-202ENST00000392597 SGSM1Q2NKQ1 1148 aa21.47■■□□□ 1.03
PTPN11-202ENST00000392597 MTHFD1LQ6UB35 978 aa21.47■■□□□ 1.03
PTPN11-202ENST00000392597 DNAJC5GQ8N7S2 189 aa21.47■■□□□ 1.03
PTPN11-202ENST00000392597 UBR7Q8N806 425 aa21.47■■□□□ 1.03
PTPN11-202ENST00000392597 MCF2P10911 925 aa21.46■■□□□ 1.03
PTPN11-202ENST00000392597 ZNF132P52740 706 aa21.46■■□□□ 1.03
PTPN11-202ENST00000392597 EPHB4P54760 987 aa21.46■■□□□ 1.03
PTPN11-202ENST00000392597 TNFAIP2Q03169 654 aa21.46■■□□□ 1.03
PTPN11-202ENST00000392597 KYAT1Q16773 422 aa21.46■■□□□ 1.03
PTPN11-202ENST00000392597 EEF1DP3Q658K8 133 aa21.46■■□□□ 1.03
PTPN11-202ENST00000392597 TMEM270Q6UE05 265 aa21.46■■□□□ 1.03
PTPN11-202ENST00000392597 RBBP8NLQ8NC74 664 aaPredicted RBP21.46■■□□□ 1.03
PTPN11-202ENST00000392597 OR6J1Q8NGC5 347 aa21.46■■□□□ 1.03
PTPN11-202ENST00000392597 ZBTB10Q96DT7 871 aa21.46■■□□□ 1.03
PTPN11-202ENST00000392597 WNT8AQ9H1J5 351 aa21.46■■□□□ 1.03
PTPN11-202ENST00000392597 AKT3Q9Y243 479 aa21.46■■□□□ 1.03
PTPN11-202ENST00000392597 KRIT1O00522 736 aa21.45■■□□□ 1.02
PTPN11-202ENST00000392597 ZEB2O60315 1214 aa21.45■■□□□ 1.02
PTPN11-202ENST00000392597 PPP2R5EQ16537 467 aa21.45■■□□□ 1.02
PTPN11-202ENST00000392597 AMHR2Q16671 573 aa21.45■■□□□ 1.02
PTPN11-202ENST00000392597 DCAF12L1Q5VU92 463 aa21.45■■□□□ 1.02
PTPN11-202ENST00000392597 EMBQ6PCB8 327 aa21.45■■□□□ 1.02
PTPN11-202ENST00000392597 THNSL1Q8IYQ7 743 aa21.45■■□□□ 1.02
PTPN11-202ENST00000392597 MCOLN2Q8IZK6 566 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms