RNA–Protein interactions for RNA: ENST00000391867.7

MRPL55-219, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MRPL55, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-219ENST00000391867 SMAD2Q15796 467 aaKnown RBP14.27□□□□□ -0.13
MRPL55-219ENST00000391867 FAM26FQ5R3K3 315 aa14.27□□□□□ -0.13
MRPL55-219ENST00000391867 JADE1Q6IE81 842 aa14.27□□□□□ -0.13
MRPL55-219ENST00000391867 SLFN12LQ6IEE8 588 aa14.27□□□□□ -0.13
MRPL55-219ENST00000391867 UNC13DQ70J99 1090 aa14.27□□□□□ -0.13
MRPL55-219ENST00000391867 DDX27Q96GQ7 796 aaKnown RBP14.27□□□□□ -0.13
MRPL55-219ENST00000391867 PAGE5Q96GU1 130 aa14.27□□□□□ -0.13
MRPL55-219ENST00000391867 FAM213AQ9BRX8 229 aa14.27□□□□□ -0.13
MRPL55-219ENST00000391867 S1PR5Q9H228 398 aa14.27□□□□□ -0.13
MRPL55-219ENST00000391867 PCIF1Q9H4Z3 704 aa14.27□□□□□ -0.13
MRPL55-219ENST00000391867 PLEKHA5Q9HAU0 1116 aa14.27□□□□□ -0.13
MRPL55-219ENST00000391867 FAM50BQ9Y247 325 aa14.27□□□□□ -0.13
MRPL55-219ENST00000391867 STYXL1Q9Y6J8 313 aa14.27□□□□□ -0.13
MRPL55-219ENST00000391867 XIRP2A4UGR9 3374 aa14.26□□□□□ -0.13
MRPL55-219ENST00000391867 TMEM189-UBE2V1I3L0A0 370 aa14.26□□□□□ -0.13
MRPL55-219ENST00000391867 PPEF2O14830 753 aa14.26□□□□□ -0.13
MRPL55-219ENST00000391867 ADAM12O43184 909 aa14.26□□□□□ -0.13
MRPL55-219ENST00000391867 PRR29P0C7W0 189 aa14.26□□□□□ -0.13
MRPL55-219ENST00000391867 MCM4P33991 863 aa14.26□□□□□ -0.13
MRPL55-219ENST00000391867 HOXD13P35453 343 aa14.26□□□□□ -0.13
MRPL55-219ENST00000391867 SYKP43405 635 aa14.26□□□□□ -0.13
MRPL55-219ENST00000391867 WNT7BP56706 349 aa14.26□□□□□ -0.13
MRPL55-219ENST00000391867 ZP2Q05996 745 aa14.26□□□□□ -0.13
MRPL55-219ENST00000391867 ALCAMQ13740 583 aa14.26□□□□□ -0.13
MRPL55-219ENST00000391867 PSMD5Q16401 504 aa14.26□□□□□ -0.13
MRPL55-219ENST00000391867 KYAT1Q16773 422 aa14.26□□□□□ -0.13
MRPL55-219ENST00000391867 CNNM4Q6P4Q7 775 aa14.26□□□□□ -0.13
MRPL55-219ENST00000391867 CRELD2Q6UXH1 353 aaPredicted RBP14.26□□□□□ -0.13
MRPL55-219ENST00000391867 PPFIBP1Q86W92 1011 aa14.26□□□□□ -0.13
MRPL55-219ENST00000391867 NELFCDQ8IXH7 590 aa14.26□□□□□ -0.13
MRPL55-219ENST00000391867 FAM84AQ96KN4 292 aa14.26□□□□□ -0.13
MRPL55-219ENST00000391867 FBXL18Q96ME1 805 aa14.26□□□□□ -0.13
MRPL55-219ENST00000391867 PYM1Q9BRP8 204 aaKnown RBP14.26□□□□□ -0.13
MRPL55-219ENST00000391867 RXFP1Q9HBX9 757 aa14.26□□□□□ -0.13
MRPL55-219ENST00000391867 SLC39A2Q9NP94 309 aa14.26□□□□□ -0.13
MRPL55-219ENST00000391867 MAN1C1Q9NR34 630 aa14.26□□□□□ -0.13
MRPL55-219ENST00000391867 SSX2IPQ9Y2D8 614 aa14.26□□□□□ -0.13
MRPL55-219ENST00000391867 NUB1Q9Y5A7 615 aa14.26□□□□□ -0.13
MRPL55-219ENST00000391867 PLXNA3P51805 1871 aa14.26□□□□□ -0.13
MRPL55-219ENST00000391867 GLUD1P00367 558 aa14.25□□□□□ -0.13
MRPL55-219ENST00000391867 HOXB8P17481 243 aaPredicted RBP14.25□□□□□ -0.13
MRPL55-219ENST00000391867 FGFR3P22607 806 aa14.25□□□□□ -0.13
MRPL55-219ENST00000391867 EHHADHQ08426 723 aa14.25□□□□□ -0.13
MRPL55-219ENST00000391867 ELAVL2Q12926 359 aaKnown RBP14.25□□□□□ -0.13
MRPL55-219ENST00000391867 ZBTB6Q15916 424 aa14.25□□□□□ -0.13
MRPL55-219ENST00000391867 ARMCX5Q6P1M9 558 aa14.25□□□□□ -0.13
MRPL55-219ENST00000391867 TMC5Q6UXY8 1006 aa14.25□□□□□ -0.13
MRPL55-219ENST00000391867 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.25□□□□□ -0.13
MRPL55-219ENST00000391867 STXBP4Q6ZWJ1 553 aa14.25□□□□□ -0.13
MRPL55-219ENST00000391867 ADHFE1Q8IWW8 467 aa14.25□□□□□ -0.13
MRPL55-219ENST00000391867 GJD3Q8N144 294 aa14.25□□□□□ -0.13
MRPL55-219ENST00000391867 LNX1Q8TBB1 728 aaPredicted RBP14.25□□□□□ -0.13
MRPL55-219ENST00000391867 PIK3R5Q8WYR1 880 aa14.25□□□□□ -0.13
MRPL55-219ENST00000391867 SUSD6Q92537 303 aa14.25□□□□□ -0.13
MRPL55-219ENST00000391867 KHSRPQ92945 711 aaKnown RBP eCLIP14.25□□□□□ -0.13
MRPL55-219ENST00000391867 CLSTN3Q9BQT9 956 aa14.25□□□□□ -0.13
MRPL55-219ENST00000391867 TMEM206Q9H813 350 aa14.25□□□□□ -0.13
MRPL55-219ENST00000391867 UBQLN1Q9UMX0 589 aaKnown RBP14.25□□□□□ -0.13
MRPL55-219ENST00000391867 VCANP13611 3396 aa14.25□□□□□ -0.13
MRPL55-219ENST00000391867 CUL9Q8IWT3 2517 aa14.25□□□□□ -0.13
MRPL55-219ENST00000391867 A0A0C4DFX4 3053 aa14.24□□□□□ -0.13
MRPL55-219ENST00000391867 SPTBN5Q9NRC6 3674 aaKnown RBP14.24□□□□□ -0.13
MRPL55-219ENST00000391867 A0A1W2PQ27 194 aa14.24□□□□□ -0.13
MRPL55-219ENST00000391867 A0A1W2PQ64 194 aa14.24□□□□□ -0.13
MRPL55-219ENST00000391867 A0A1W2PQD8 194 aa14.24□□□□□ -0.13
MRPL55-219ENST00000391867 TGM5O43548 720 aa14.24□□□□□ -0.13
MRPL55-219ENST00000391867 KLRC4O43908 158 aa14.24□□□□□ -0.13
MRPL55-219ENST00000391867 RPL9P32969 192 aaKnown RBP14.24□□□□□ -0.13
MRPL55-219ENST00000391867 CBX2Q14781 532 aaPredicted RBP14.24□□□□□ -0.13
MRPL55-219ENST00000391867 TMEM132DQ14C87 1099 aa14.24□□□□□ -0.13
MRPL55-219ENST00000391867 POSTNQ15063 836 aa14.24□□□□□ -0.13
MRPL55-219ENST00000391867 RSPO2Q6UXX9 243 aaPredicted RBP14.24□□□□□ -0.13
MRPL55-219ENST00000391867 EPM2AIP1Q7L775 607 aaPredicted RBP14.24□□□□□ -0.13
MRPL55-219ENST00000391867 EFCAB13Q8IY85 973 aa14.24□□□□□ -0.13
MRPL55-219ENST00000391867 SCFD1Q8WVM8 642 aa14.24□□□□□ -0.13
MRPL55-219ENST00000391867 RPGRIP1Q96KN7 1286 aa14.24□□□□□ -0.13
MRPL55-219ENST00000391867 ADAM7Q9H2U9 754 aa14.24□□□□□ -0.13
MRPL55-219ENST00000391867 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.24□□□□□ -0.13
MRPL55-219ENST00000391867 DZANK1Q9NVP4 752 aa14.24□□□□□ -0.13
MRPL55-219ENST00000391867 ANK1P16157 1881 aa14.24□□□□□ -0.13
MRPL55-219ENST00000391867 FAM237AA0A1B0GTK4 181 aa14.23□□□□□ -0.13
MRPL55-219ENST00000391867 PVALEFA0A1B0GWK0 134 aa14.23□□□□□ -0.13
MRPL55-219ENST00000391867 EIF3DO15371 548 aaKnown RBP eCLIP14.23□□□□□ -0.13
MRPL55-219ENST00000391867 TRAPPC3O43617 180 aa14.23□□□□□ -0.13
MRPL55-219ENST00000391867 RFPL2O75678 378 aa14.23□□□□□ -0.13
MRPL55-219ENST00000391867 ADRB2P07550 413 aa14.23□□□□□ -0.13
MRPL55-219ENST00000391867 GARTP22102 1010 aa14.23□□□□□ -0.13
MRPL55-219ENST00000391867 LRPAP1P30533 357 aa14.23□□□□□ -0.13
MRPL55-219ENST00000391867 KMT5BQ4FZB7 885 aa14.23□□□□□ -0.13
MRPL55-219ENST00000391867 SPATA1Q5VX52 437 aa14.23□□□□□ -0.13
MRPL55-219ENST00000391867 CES5AQ6NT32 575 aa14.23□□□□□ -0.13
MRPL55-219ENST00000391867 BEST2Q8NFU1 509 aa14.23□□□□□ -0.13
MRPL55-219ENST00000391867 POMKQ9H5K3 350 aa14.23□□□□□ -0.13
MRPL55-219ENST00000391867 SFXN1Q9H9B4 322 aa14.23□□□□□ -0.13
MRPL55-219ENST00000391867 TSHZ2Q9NRE2 1034 aa14.23□□□□□ -0.13
MRPL55-219ENST00000391867 EXOC1Q9NV70 894 aa14.23□□□□□ -0.13
MRPL55-219ENST00000391867 RBAKQ9NYW8 714 aaPredicted RBP14.23□□□□□ -0.13
MRPL55-219ENST00000391867 FNIP2Q9P278 1114 aa14.23□□□□□ -0.13
MRPL55-219ENST00000391867 TIMM13Q9Y5L4 95 aaPredicted RBP14.23□□□□□ -0.13
MRPL55-219ENST00000391867 CDY1Q9Y6F8 540 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms