RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 EGFL8Q99944 293 aa16.97■□□□□ 0.31
SHANK1-204ENST00000391814 AFF4Q9UHB7 1163 aaKnown RBP16.97■□□□□ 0.31
SHANK1-204ENST00000391814 UBA6A0AVT1 1052 aaPredicted RBP16.97■□□□□ 0.31
SHANK1-204ENST00000391814 CYP2D6P10635 497 aa16.97■□□□□ 0.31
SHANK1-204ENST00000391814 SLC1A1P43005 524 aa16.97■□□□□ 0.31
SHANK1-204ENST00000391814 NME3Q13232 169 aa16.97■□□□□ 0.31
SHANK1-204ENST00000391814 C3orf62Q6ZUJ4 267 aa16.97■□□□□ 0.31
SHANK1-204ENST00000391814 E2F7Q96AV8 911 aa16.97■□□□□ 0.31
SHANK1-204ENST00000391814 FAM129AQ9BZQ8 928 aa16.97■□□□□ 0.31
SHANK1-204ENST00000391814 KRT16P08779 473 aa16.97■□□□□ 0.31
SHANK1-204ENST00000391814 SERPINB5P36952 375 aa16.97■□□□□ 0.31
SHANK1-204ENST00000391814 ATP2C1P98194 919 aaPredicted RBP16.97■□□□□ 0.31
SHANK1-204ENST00000391814 RUNX1T1Q06455 604 aa16.97■□□□□ 0.31
SHANK1-204ENST00000391814 NLRP9Q7RTR0 991 aa16.97■□□□□ 0.31
SHANK1-204ENST00000391814 E7ENQ6 273 aa16.96■□□□□ 0.31
SHANK1-204ENST00000391814 AKR1B1P15121 316 aa16.96■□□□□ 0.31
SHANK1-204ENST00000391814 CDK8P49336 464 aa16.96■□□□□ 0.31
SHANK1-204ENST00000391814 SESN2P58004 480 aaPredicted RBP16.96■□□□□ 0.31
SHANK1-204ENST00000391814 SLFN12LQ6IEE8 588 aa16.96■□□□□ 0.31
SHANK1-204ENST00000391814 AGBL1Q96MI9 1066 aa16.96■□□□□ 0.31
SHANK1-204ENST00000391814 NDUFA13Q9P0J0 144 aa16.96■□□□□ 0.31
SHANK1-204ENST00000391814 ATP8B3O60423 1300 aa16.96■□□□□ 0.31
SHANK1-204ENST00000391814 ATP4AP20648 1035 aa16.96■□□□□ 0.31
SHANK1-204ENST00000391814 PPARGP37231 505 aaPredicted RBP16.96■□□□□ 0.31
SHANK1-204ENST00000391814 ZNF667Q5HYK9 610 aa16.96■□□□□ 0.31
SHANK1-204ENST00000391814 SERPINB12Q96P63 405 aa16.96■□□□□ 0.31
SHANK1-204ENST00000391814 ERP44Q9BS26 406 aa16.96■□□□□ 0.31
SHANK1-204ENST00000391814 TMEM117Q9H0C3 514 aa16.96■□□□□ 0.31
SHANK1-204ENST00000391814 CDH6P55285 790 aa16.96■□□□□ 0.31
SHANK1-204ENST00000391814 WDR93Q6P2C0 686 aa16.96■□□□□ 0.31
SHANK1-204ENST00000391814 TASP1Q9H6P5 420 aa16.96■□□□□ 0.31
SHANK1-204ENST00000391814 ALBP02768 609 aa16.96■□□□□ 0.31
SHANK1-204ENST00000391814 BMP3P12645 472 aa16.96■□□□□ 0.31
SHANK1-204ENST00000391814 BCAR1P56945 870 aa16.96■□□□□ 0.31
SHANK1-204ENST00000391814 KDELC2Q7Z4H8 507 aa16.96■□□□□ 0.31
SHANK1-204ENST00000391814 DIS3LQ8TF46 1054 aaKnown RBP16.96■□□□□ 0.31
SHANK1-204ENST00000391814 RNF139Q8WU17 664 aa16.96■□□□□ 0.31
SHANK1-204ENST00000391814 ZC3H7BQ9UGR2 993 aaKnown RBP16.96■□□□□ 0.31
SHANK1-204ENST00000391814 C15orf41Q9Y2V0 281 aa16.96■□□□□ 0.31
SHANK1-204ENST00000391814 GPC3P51654 580 aa16.96■□□□□ 0.31
SHANK1-204ENST00000391814 ADARP55265 1226 aaKnown RBP16.96■□□□□ 0.31
SHANK1-204ENST00000391814 ABCE1P61221 599 aaKnown RBP16.96■□□□□ 0.31
SHANK1-204ENST00000391814 TERB1Q8NA31 727 aa16.96■□□□□ 0.31
SHANK1-204ENST00000391814 MOV10L1Q9BXT6 1211 aaKnown RBP16.96■□□□□ 0.31
SHANK1-204ENST00000391814 ATMINO43313 823 aaPredicted RBP16.96■□□□□ 0.3
SHANK1-204ENST00000391814 ERVK-24P63145 666 aa16.96■□□□□ 0.3
SHANK1-204ENST00000391814 MTM1Q13496 603 aa16.96■□□□□ 0.3
SHANK1-204ENST00000391814 KCNB1Q14721 858 aa16.96■□□□□ 0.3
SHANK1-204ENST00000391814 R3HDM1Q15032 1099 aaKnown RBP16.96■□□□□ 0.3
SHANK1-204ENST00000391814 LPCAT2Q7L5N7 544 aa16.96■□□□□ 0.3
SHANK1-204ENST00000391814 AP3B1O00203 1094 aa16.95■□□□□ 0.3
SHANK1-204ENST00000391814 APBA3O96018 575 aa16.95■□□□□ 0.3
SHANK1-204ENST00000391814 ADRM1Q16186 407 aa16.95■□□□□ 0.3
SHANK1-204ENST00000391814 MTDHQ86UE4 582 aaKnown RBP16.95■□□□□ 0.3
SHANK1-204ENST00000391814 ARL10Q8N8L6 244 aa16.95■□□□□ 0.3
SHANK1-204ENST00000391814 CATSPER2Q96P56 530 aa16.95■□□□□ 0.3
SHANK1-204ENST00000391814 STRBPQ96SI9 672 aaKnown RBP16.95■□□□□ 0.3
SHANK1-204ENST00000391814 LMCD1Q9NZU5 365 aa16.95■□□□□ 0.3
SHANK1-204ENST00000391814 TTC37Q6PGP7 1564 aa16.95■□□□□ 0.3
SHANK1-204ENST00000391814 FAM95CA0A1B0GW59 222 aa16.95■□□□□ 0.3
SHANK1-204ENST00000391814 KCNA6P17658 529 aa16.95■□□□□ 0.3
SHANK1-204ENST00000391814 GEMIN4P57678 1058 aaKnown RBP16.95■□□□□ 0.3
SHANK1-204ENST00000391814 RIBC1Q8N443 379 aaPredicted RBP16.95■□□□□ 0.3
SHANK1-204ENST00000391814 SENP7Q9BQF6 1050 aa16.95■□□□□ 0.3
SHANK1-204ENST00000391814 DHX35Q9H5Z1 703 aaKnown RBP16.95■□□□□ 0.3
SHANK1-204ENST00000391814 DCLRE1BQ9H816 532 aa16.95■□□□□ 0.3
SHANK1-204ENST00000391814 K7ERI5 159 aa16.95■□□□□ 0.3
SHANK1-204ENST00000391814 LDHAP00338 332 aaKnown RBP16.95■□□□□ 0.3
SHANK1-204ENST00000391814 GHRP10912 638 aa16.95■□□□□ 0.3
SHANK1-204ENST00000391814 MICU2Q8IYU8 434 aa16.95■□□□□ 0.3
SHANK1-204ENST00000391814 GUF1Q8N442 669 aaKnown RBP16.95■□□□□ 0.3
SHANK1-204ENST00000391814 RBBP8NLQ8NC74 664 aaPredicted RBP16.95■□□□□ 0.3
SHANK1-204ENST00000391814 COBLL1Q53SF7 1204 aa16.95■□□□□ 0.3
SHANK1-204ENST00000391814 PADI6Q6TGC4 694 aa16.95■□□□□ 0.3
SHANK1-204ENST00000391814 GANCQ8TET4 914 aa16.95■□□□□ 0.3
SHANK1-204ENST00000391814 PDCD6IPQ8WUM4 868 aaKnown RBP16.95■□□□□ 0.3
SHANK1-204ENST00000391814 MTERF3Q96E29 417 aa16.95■□□□□ 0.3
SHANK1-204ENST00000391814 WDR19Q8NEZ3 1342 aa16.95■□□□□ 0.3
SHANK1-204ENST00000391814 FUT11Q495W5 492 aa16.95■□□□□ 0.3
SHANK1-204ENST00000391814 MEI1Q5TIA1 1274 aa16.95■□□□□ 0.3
SHANK1-204ENST00000391814 TSHZ1Q6ZSZ6 1077 aa16.95■□□□□ 0.3
SHANK1-204ENST00000391814 DFFAO00273 331 aa16.94■□□□□ 0.3
SHANK1-204ENST00000391814 CYTH3O43739 400 aa16.94■□□□□ 0.3
SHANK1-204ENST00000391814 C16orf72Q14CZ0 275 aa16.94■□□□□ 0.3
SHANK1-204ENST00000391814 MIEF2Q96C03 454 aa16.94■□□□□ 0.3
SHANK1-204ENST00000391814 NSMCE4AQ9NXX6 385 aa16.94■□□□□ 0.3
SHANK1-204ENST00000391814 PPIP5K2O43314 1243 aa16.94■□□□□ 0.3
SHANK1-204ENST00000391814 CDH2P19022 906 aaPredicted RBP16.94■□□□□ 0.3
SHANK1-204ENST00000391814 COILP38432 576 aaPredicted RBP16.94■□□□□ 0.3
SHANK1-204ENST00000391814 GRIN1Q05586 938 aa16.94■□□□□ 0.3
SHANK1-204ENST00000391814 EZH2Q15910 746 aaKnown RBP16.94■□□□□ 0.3
SHANK1-204ENST00000391814 NLRP4Q96MN2 994 aa16.94■□□□□ 0.3
SHANK1-204ENST00000391814 APPL1Q9UKG1 709 aa16.94■□□□□ 0.3
SHANK1-204ENST00000391814 ASXL2Q76L83 1435 aa16.94■□□□□ 0.3
SHANK1-204ENST00000391814 A0A1W2PQJ5 194 aa16.94■□□□□ 0.3
SHANK1-204ENST00000391814 DNALI1O14645 258 aaPredicted RBP16.94■□□□□ 0.3
SHANK1-204ENST00000391814 ARMCX2Q7L311 632 aa16.94■□□□□ 0.3
SHANK1-204ENST00000391814 OR8H2Q8N162 312 aa16.94■□□□□ 0.3
SHANK1-204ENST00000391814 PRCCQ92733 491 aaPredicted RBP16.94■□□□□ 0.3
SHANK1-204ENST00000391814 RXFP1Q9HBX9 757 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms