RNA–Protein interactions for RNA: ENST00000390627.3

IGHV3-53-201, Transcript of immunoglobulin heavy variable 3-53, humanhuman

APPRIS P1 BASIC

Gene IGHV3-53, Length 571 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-53-201ENST00000390627 EFEMP2O95967 443 aa16.3■□□□□ 0.2
IGHV3-53-201ENST00000390627 GLUD2P49448 558 aa16.3■□□□□ 0.2
IGHV3-53-201ENST00000390627 HYAL1Q12794 435 aa16.3■□□□□ 0.2
IGHV3-53-201ENST00000390627 MYBPC2Q14324 1141 aa16.3■□□□□ 0.2
IGHV3-53-201ENST00000390627 PTPN14Q15678 1187 aa16.3■□□□□ 0.2
IGHV3-53-201ENST00000390627 SNRNP35Q16560 246 aaKnown RBP16.3■□□□□ 0.2
IGHV3-53-201ENST00000390627 USP41Q3LFD5 358 aa16.3■□□□□ 0.2
IGHV3-53-201ENST00000390627 COBLL1Q53SF7 1204 aa16.3■□□□□ 0.2
IGHV3-53-201ENST00000390627 ADGRD2Q7Z7M1 963 aa16.3■□□□□ 0.2
IGHV3-53-201ENST00000390627 CBWD2Q8IUF1 395 aa16.3■□□□□ 0.2
IGHV3-53-201ENST00000390627 SLC9A9Q8IVB4 645 aa16.3■□□□□ 0.2
IGHV3-53-201ENST00000390627 TMEM174Q8WUU8 243 aa16.3■□□□□ 0.2
IGHV3-53-201ENST00000390627 GPR62Q9BZJ7 368 aa16.3■□□□□ 0.2
IGHV3-53-201ENST00000390627 LMBRD1Q9NUN5 540 aa16.3■□□□□ 0.2
IGHV3-53-201ENST00000390627 COG5Q9UP83 839 aa16.3■□□□□ 0.2
IGHV3-53-201ENST00000390627 MAPK8IP1Q9UQF2 711 aa16.3■□□□□ 0.2
IGHV3-53-201ENST00000390627 TRAF3IP3Q9Y228 551 aa16.3■□□□□ 0.2
IGHV3-53-201ENST00000390627 NUB1Q9Y5A7 615 aa16.3■□□□□ 0.2
IGHV3-53-201ENST00000390627 TRANK1O15050 2925 aa16.3■□□□□ 0.2
IGHV3-53-201ENST00000390627 ANK1P16157 1881 aa16.29■□□□□ 0.2
IGHV3-53-201ENST00000390627 HIDE1A8MVS5 230 aa16.29■□□□□ 0.2
IGHV3-53-201ENST00000390627 TULP1O00294 542 aaPredicted RBP16.29■□□□□ 0.2
IGHV3-53-201ENST00000390627 EXOC3O60645 756 aa16.29■□□□□ 0.2
IGHV3-53-201ENST00000390627 NR3C1P04150 777 aa16.29■□□□□ 0.2
IGHV3-53-201ENST00000390627 PPP1R2P41236 205 aa16.29■□□□□ 0.2
IGHV3-53-201ENST00000390627 NRIP1P48552 1158 aa16.29■□□□□ 0.2
IGHV3-53-201ENST00000390627 DSG1Q02413 1049 aa16.29■□□□□ 0.2
IGHV3-53-201ENST00000390627 STIM1Q13586 685 aa16.29■□□□□ 0.2
IGHV3-53-201ENST00000390627 NFIL3Q16649 462 aa16.29■□□□□ 0.2
IGHV3-53-201ENST00000390627 DUSP6Q16828 381 aa16.29■□□□□ 0.2
IGHV3-53-201ENST00000390627 FAM171A1Q5VUB5 890 aa16.29■□□□□ 0.2
IGHV3-53-201ENST00000390627 RBM23Q86U06 439 aaKnown RBP16.29■□□□□ 0.2
IGHV3-53-201ENST00000390627 EFCAB13Q8IY85 973 aa16.29■□□□□ 0.2
IGHV3-53-201ENST00000390627 GPR65Q8IYL9 337 aa16.29■□□□□ 0.2
IGHV3-53-201ENST00000390627 SMYD4Q8IYR2 804 aaPredicted RBP16.29■□□□□ 0.2
IGHV3-53-201ENST00000390627 C3orf58Q8NDZ4 430 aa16.29■□□□□ 0.2
IGHV3-53-201ENST00000390627 CACTINQ8WUQ7 758 aaKnown RBP16.29■□□□□ 0.2
IGHV3-53-201ENST00000390627 PABPC5Q96DU9 382 aaKnown RBP16.29■□□□□ 0.2
IGHV3-53-201ENST00000390627 EMILIN2Q9BXX0 1053 aa16.29■□□□□ 0.2
IGHV3-53-201ENST00000390627 CHST7Q9NS84 486 aa16.29■□□□□ 0.2
IGHV3-53-201ENST00000390627 MAN1B1Q9UKM7 699 aa16.29■□□□□ 0.2
IGHV3-53-201ENST00000390627 SRGAP2BP0DMP2 458 aa16.28■□□□□ 0.2
IGHV3-53-201ENST00000390627 PAX3P23760 479 aa16.28■□□□□ 0.2
IGHV3-53-201ENST00000390627 MCM4P33991 863 aa16.28■□□□□ 0.2
IGHV3-53-201ENST00000390627 GUCY2FP51841 1108 aa16.28■□□□□ 0.2
IGHV3-53-201ENST00000390627 TFAMQ00059 246 aaKnown RBP16.28■□□□□ 0.2
IGHV3-53-201ENST00000390627 CREMQ03060 361 aa16.28■□□□□ 0.2
IGHV3-53-201ENST00000390627 COL19A1Q14993 1142 aa16.28■□□□□ 0.2
IGHV3-53-201ENST00000390627 PDXDC1Q6P996 788 aa16.28■□□□□ 0.2
IGHV3-53-201ENST00000390627 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.28■□□□□ 0.2
IGHV3-53-201ENST00000390627 TAS1R1Q7RTX1 841 aa16.28■□□□□ 0.2
IGHV3-53-201ENST00000390627 EFHBQ8N7U6 833 aa16.28■□□□□ 0.2
IGHV3-53-201ENST00000390627 RDH13Q8NBN7 331 aa16.28■□□□□ 0.2
IGHV3-53-201ENST00000390627 AUTS2Q8WXX7 1259 aa16.28■□□□□ 0.2
IGHV3-53-201ENST00000390627 HLA-CQ95604 372 aa16.28■□□□□ 0.2
IGHV3-53-201ENST00000390627 FNBP1Q96RU3 617 aa16.28■□□□□ 0.2
IGHV3-53-201ENST00000390627 TTPALQ9BTX7 342 aa16.28■□□□□ 0.2
IGHV3-53-201ENST00000390627 IGFLR1Q9H665 355 aa16.28■□□□□ 0.2
IGHV3-53-201ENST00000390627 PDE11AQ9HCR9 933 aa16.28■□□□□ 0.2
IGHV3-53-201ENST00000390627 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.28■□□□□ 0.2
IGHV3-53-201ENST00000390627 DMAC2Q9NW81 257 aa16.28■□□□□ 0.2
IGHV3-53-201ENST00000390627 THEGQ9P2T0 379 aa16.28■□□□□ 0.2
IGHV3-53-201ENST00000390627 FRMD4BQ9Y2L6 1034 aa16.28■□□□□ 0.2
IGHV3-53-201ENST00000390627 C2CD2LO14523 706 aa16.27■□□□□ 0.2
IGHV3-53-201ENST00000390627 PER2O15055 1255 aa16.27■□□□□ 0.2
IGHV3-53-201ENST00000390627 TMEM191BP0C7N4 346 aa16.27■□□□□ 0.2
IGHV3-53-201ENST00000390627 NR2F2P24468 414 aa16.27■□□□□ 0.2
IGHV3-53-201ENST00000390627 RPL13P26373 211 aaKnown RBP16.27■□□□□ 0.2
IGHV3-53-201ENST00000390627 PRCPP42785 496 aa16.27■□□□□ 0.2
IGHV3-53-201ENST00000390627 BRCC3P46736 316 aa16.27■□□□□ 0.2
IGHV3-53-201ENST00000390627 WNT7BP56706 349 aa16.27■□□□□ 0.2
IGHV3-53-201ENST00000390627 CYP24A1Q07973 514 aa16.27■□□□□ 0.2
IGHV3-53-201ENST00000390627 PSMD6Q15008 389 aa16.27■□□□□ 0.2
IGHV3-53-201ENST00000390627 CAMK4Q16566 473 aa16.27■□□□□ 0.2
IGHV3-53-201ENST00000390627 KIAA0319Q5VV43 1072 aa16.27■□□□□ 0.2
IGHV3-53-201ENST00000390627 C9orf57Q5W0N0 161 aa16.27■□□□□ 0.2
IGHV3-53-201ENST00000390627 CD300LGQ6UXG3 332 aa16.27■□□□□ 0.2
IGHV3-53-201ENST00000390627 PPFIBP1Q86W92 1011 aa16.27■□□□□ 0.2
IGHV3-53-201ENST00000390627 CEP57Q86XR8 500 aa16.27■□□□□ 0.2
IGHV3-53-201ENST00000390627 TRIML1Q8N9V2 468 aa16.27■□□□□ 0.2
IGHV3-53-201ENST00000390627 RIN2Q8WYP3 895 aaPredicted RBP16.27■□□□□ 0.2
IGHV3-53-201ENST00000390627 ANKRD36BP1Q96IX9 119 aa16.27■□□□□ 0.2
IGHV3-53-201ENST00000390627 TSG101Q99816 390 aa16.27■□□□□ 0.2
IGHV3-53-201ENST00000390627 CLSTN2Q9H4D0 955 aa16.27■□□□□ 0.2
IGHV3-53-201ENST00000390627 UBE2ZQ9H832 354 aaPredicted RBP16.27■□□□□ 0.2
IGHV3-53-201ENST00000390627 DPP3Q9NY33 737 aa16.27■□□□□ 0.2
IGHV3-53-201ENST00000390627 CLDND1Q9NY35 253 aa16.27■□□□□ 0.2
IGHV3-53-201ENST00000390627 KIAA1468Q9P260 1216 aa16.27■□□□□ 0.2
IGHV3-53-201ENST00000390627 ANO9A1A5B4 782 aa16.26■□□□□ 0.19
IGHV3-53-201ENST00000390627 PSMA7O14818 248 aa16.26■□□□□ 0.19
IGHV3-53-201ENST00000390627 SYN3O14994 580 aa16.26■□□□□ 0.19
IGHV3-53-201ENST00000390627 LILRB3O75022 631 aa16.26■□□□□ 0.19
IGHV3-53-201ENST00000390627 TNNC2P02585 160 aa16.26■□□□□ 0.19
IGHV3-53-201ENST00000390627 ADH1AP07327 375 aa16.26■□□□□ 0.19
IGHV3-53-201ENST00000390627 FGFR3P22607 806 aa16.26■□□□□ 0.19
IGHV3-53-201ENST00000390627 GTF2F1P35269 517 aaKnown RBP eCLIP16.26■□□□□ 0.19
IGHV3-53-201ENST00000390627 NDUFV1P49821 464 aa16.26■□□□□ 0.19
IGHV3-53-201ENST00000390627 CTC1Q2NKJ3 1217 aa16.26■□□□□ 0.19
IGHV3-53-201ENST00000390627 EDRF1Q3B7T1 1238 aa16.26■□□□□ 0.19
IGHV3-53-201ENST00000390627 ZCWPW2Q504Y3 356 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms