RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 PPP1R3DO95685 299 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 BPNT1O95861 308 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 TTLL1O95922 423 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 IGKV1D-16P01601 117 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 KRT6AP02538 564 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 LTFP02788 710 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 C4BPAP04003 597 aaKnown RBP-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 KRT6BP04259 564 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 ELFN1P0C7U0 828 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 EBLN1P0CF75 366 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 CTSAP10619 480 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 CYP19A1P11511 503 aaPredicted RBP-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 MTHFD1P11586 935 aaKnown RBP-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 ITGA4P13612 1032 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 IL2RBP14784 551 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 PTGS1P23219 599 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 GPTP24298 496 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 TBXAS1P24557 533 aaPredicted RBP-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 MPSTP25325 297 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 ALDH4A1P30038 563 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 ECHS1P30084 290 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 GSTT1P30711 240 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 TLX1P31314 330 aaPredicted RBP-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 CDKN1AP38936 164 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 CCNFP41002 786 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 KRT6CP48668 564 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 NDUFV1P49821 464 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 CCT8P50990 548 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 NR0B1P51843 470 aaKnown RBP-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 LUMP51884 338 aaPredicted RBP-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 GTF2A2P52657 109 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 VAV2P52735 878 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 RPS26P62854 115 aaKnown RBP-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 CXADRP78310 365 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 MRPS5P82675 430 aaKnown RBP-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 PSG6Q00889 435 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 ID2Q02363 134 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 ZNF91Q05481 1191 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 ZFP36L1Q07352 338 aaKnown RBP-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 DBPQ10586 325 aaPredicted RBP-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 TUSC3Q13454 348 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 MTMR3Q13615 1198 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 AAMPQ13685 434 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 MOGSQ13724 837 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 GTF2H3Q13889 308 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 KCNJ12Q14500 433 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 PWP2Q15269 919 aaKnown RBP-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 SF3B3Q15393 1217 aaKnown RBP-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 OCLNQ16625 522 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 TMEM30BQ3MIR4 351 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 ANO6Q4KMQ2 910 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 PAN2Q504Q3 1202 aaKnown RBP-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 TCTEX1D4Q5JR98 221 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 MANEAQ5SRI9 462 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 PRAMEF19Q5SWL8 479 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 NOL9Q5SY16 702 aaKnown RBP-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 KANK2Q63ZY3 851 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 DCAF15Q66K64 600 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 MBLAC2Q68D91 279 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 KIAA0895LQ68EN5 471 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 GTF2IRD2BQ6EKJ0 949 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 TTLL5Q6EMB2 1281 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 GRAMD4Q6IC98 578 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 TTBK2Q6IQ55 1244 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 FSTL4Q6MZW2 842 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 ZSCAN25Q6NSZ9 544 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 FAAP20Q6NZ36 180 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 CEP85Q6P2H3 762 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 VWA1Q6PCB0 445 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 NXPE4Q6UWF7 544 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 PRSS57Q6UWY2 283 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 METTL7BQ6UX53 244 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 BTNL9Q6UXG8 535 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 KYAT3Q6YP21 454 aaKnown RBP-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 LIN28BQ6ZN17 250 aaKnown RBP eCLIP-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 Q6ZR54 194 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 RFX8Q6ZV50 586 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 CEP68Q76N32 757 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 SLC29A4Q7RTT9 530 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 TAS1R1Q7RTX1 841 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 KRT26Q7Z3Y9 468 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 GTF2IRD2Q86UP8 949 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 NLRP10Q86W26 655 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 TICAM1Q8IUC6 712 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 MAPKAPK5Q8IW41 473 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 SUGP2Q8IX01 1082 aaKnown RBP eCLIP-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 CCDC144CPQ8IYA2 1237 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 ZNF440Q8IYI8 595 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 C7orf61Q8IZ16 206 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 CMTM4Q8IZR5 234 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 FAM43AQ8N2R8 423 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 TMEM132CQ8N3T6 1108 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 ARL14EPQ8N8R7 260 aaPredicted RBP-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 PNLDC1Q8NA58 520 aaKnown RBP-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 FANCBQ8NB91 859 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 ADAD2Q8NCV1 583 aaKnown RBP-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 ZNF248Q8NDW4 579 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 NFAM1Q8NET5 270 aaPredicted RBP-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 CADM4Q8NFZ8 388 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 TRIM58Q8NG06 486 aa-0.16□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms