RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 GJC2Q5T442 439 aaPredicted RBP7.18□□□□□ -1.26
TRAV35-201ENST00000390462 TMTC3Q6ZXV5 915 aa7.18□□□□□ -1.26
TRAV35-201ENST00000390462 LCA5Q86VQ0 697 aa7.18□□□□□ -1.26
TRAV35-201ENST00000390462 CREG2Q8IUH2 290 aa7.18□□□□□ -1.26
TRAV35-201ENST00000390462 LZTR1Q8N653 840 aa7.18□□□□□ -1.26
TRAV35-201ENST00000390462 TEX9Q8N6V9 391 aa7.18□□□□□ -1.26
TRAV35-201ENST00000390462 USHBP1Q8N6Y0 703 aa7.18□□□□□ -1.26
TRAV35-201ENST00000390462 C12orf50Q8NA57 414 aaPredicted RBP7.18□□□□□ -1.26
TRAV35-201ENST00000390462 DCAF11Q8TEB1 546 aa7.18□□□□□ -1.26
TRAV35-201ENST00000390462 FOXRED1Q96CU9 486 aaPredicted RBP7.18□□□□□ -1.26
TRAV35-201ENST00000390462 CLPTM1LQ96KA5 538 aa7.18□□□□□ -1.26
TRAV35-201ENST00000390462 CNDP2Q96KP4 475 aaKnown RBP7.18□□□□□ -1.26
TRAV35-201ENST00000390462 JAKMIP1Q96N16 626 aaKnown RBP7.18□□□□□ -1.26
TRAV35-201ENST00000390462 SAMD11Q96NU1 681 aa7.18□□□□□ -1.26
TRAV35-201ENST00000390462 SPAG5Q96R06 1193 aa7.18□□□□□ -1.26
TRAV35-201ENST00000390462 DMRTA2Q96SC8 542 aa7.18□□□□□ -1.26
TRAV35-201ENST00000390462 NCAPGQ9BPX3 1015 aa7.18□□□□□ -1.26
TRAV35-201ENST00000390462 DESI2Q9BSY9 194 aa7.18□□□□□ -1.26
TRAV35-201ENST00000390462 SIL1Q9H173 461 aa7.18□□□□□ -1.26
TRAV35-201ENST00000390462 GRPEL1Q9HAV7 217 aa7.18□□□□□ -1.26
TRAV35-201ENST00000390462 EPB41L4AQ9HCS5 686 aaPredicted RBP7.18□□□□□ -1.26
TRAV35-201ENST00000390462 SEPSECSQ9HD40 501 aaKnown RBP7.18□□□□□ -1.26
TRAV35-201ENST00000390462 AP5S1Q9NUS5 200 aa7.18□□□□□ -1.26
TRAV35-201ENST00000390462 PCDHA6Q9UN73 950 aa7.18□□□□□ -1.26
TRAV35-201ENST00000390462 CNPY2Q9Y2B0 182 aa7.18□□□□□ -1.26
TRAV35-201ENST00000390462 X6R8D5 127 aa7.18□□□□□ -1.26
TRAV35-201ENST00000390462 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.17□□□□□ -1.26
TRAV35-201ENST00000390462 hCG_1807616A0A1W2PRN6 198 aa7.17□□□□□ -1.26
TRAV35-201ENST00000390462 FAM90A27PA6NNH2 459 aa7.17□□□□□ -1.26
TRAV35-201ENST00000390462 DEAF1O75398 565 aaPredicted RBP7.17□□□□□ -1.26
TRAV35-201ENST00000390462 SYPP08247 313 aa7.17□□□□□ -1.26
TRAV35-201ENST00000390462 CLTBP09497 229 aa7.17□□□□□ -1.26
TRAV35-201ENST00000390462 HNRNPA1P09651 372 aaKnown RBP eCLIP7.17□□□□□ -1.26
TRAV35-201ENST00000390462 KIR3DL1P43629 444 aa7.17□□□□□ -1.26
TRAV35-201ENST00000390462 ACTR2P61160 394 aa7.17□□□□□ -1.26
TRAV35-201ENST00000390462 SRSF11Q05519 484 aaKnown RBP7.17□□□□□ -1.26
TRAV35-201ENST00000390462 PPP3CAQ08209 521 aa7.17□□□□□ -1.26
TRAV35-201ENST00000390462 ADCY2Q08462 1091 aa7.17□□□□□ -1.26
TRAV35-201ENST00000390462 MGAT2Q10469 447 aa7.17□□□□□ -1.26
TRAV35-201ENST00000390462 MYBPC3Q14896 1274 aa7.17□□□□□ -1.26
TRAV35-201ENST00000390462 WTAPQ15007 396 aa7.17□□□□□ -1.26
TRAV35-201ENST00000390462 KHDC1Q4VXA5 237 aaKnown RBP7.17□□□□□ -1.26
TRAV35-201ENST00000390462 KHDC1LQ5JSQ8 128 aa7.17□□□□□ -1.26
TRAV35-201ENST00000390462 CCDC158Q5M9N0 1113 aa7.17□□□□□ -1.26
TRAV35-201ENST00000390462 BTBD8Q5XKL5 378 aa7.17□□□□□ -1.26
TRAV35-201ENST00000390462 UNQ6494/PRO21346Q6UXR6 183 aa7.17□□□□□ -1.26
TRAV35-201ENST00000390462 FAM47EQ6ZV65 393 aa7.17□□□□□ -1.26
TRAV35-201ENST00000390462 BBS12Q6ZW61 710 aa7.17□□□□□ -1.26
TRAV35-201ENST00000390462 KCTD1Q719H9 257 aa7.17□□□□□ -1.26
TRAV35-201ENST00000390462 RNF44Q7L0R7 432 aa7.17□□□□□ -1.26
TRAV35-201ENST00000390462 KANSL1Q7Z3B3 1105 aa7.17□□□□□ -1.26
TRAV35-201ENST00000390462 UBE2Q1Q7Z7E8 422 aa7.17□□□□□ -1.26
TRAV35-201ENST00000390462 CCDC117Q8IWD4 279 aaPredicted RBP7.17□□□□□ -1.26
TRAV35-201ENST00000390462 RPAP2Q8IXW5 612 aaPredicted RBP7.17□□□□□ -1.26
TRAV35-201ENST00000390462 CELF5Q8N6W0 485 aaKnown RBP7.17□□□□□ -1.26
TRAV35-201ENST00000390462 GLIS1Q8NBF1 620 aa7.17□□□□□ -1.26
TRAV35-201ENST00000390462 MGARPQ8TDB4 240 aa7.17□□□□□ -1.26
TRAV35-201ENST00000390462 DDX23Q9BUQ8 820 aaKnown RBP7.17□□□□□ -1.26
TRAV35-201ENST00000390462 MTRRQ9UBK8 725 aa7.17□□□□□ -1.26
TRAV35-201ENST00000390462 RPS6KA6Q9UK32 745 aa7.17□□□□□ -1.26
TRAV35-201ENST00000390462 PA2G4Q9UQ80 394 aaKnown RBP7.17□□□□□ -1.26
TRAV35-201ENST00000390462 COA3Q9Y2R0 106 aaPredicted RBP7.17□□□□□ -1.26
TRAV35-201ENST00000390462 MYPNQ86TC9 1320 aa7.17□□□□□ -1.26
TRAV35-201ENST00000390462 TNIKQ9UKE5 1360 aa7.17□□□□□ -1.26
TRAV35-201ENST00000390462 UACAQ9BZF9 1416 aa7.17□□□□□ -1.26
TRAV35-201ENST00000390462 MAGI3Q5TCQ9 1506 aa7.17□□□□□ -1.26
TRAV35-201ENST00000390462 TRIM43BA6NCK2 446 aa7.16□□□□□ -1.26
TRAV35-201ENST00000390462 FAM171A2A8MVW0 826 aa7.16□□□□□ -1.26
TRAV35-201ENST00000390462 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.16□□□□□ -1.26
TRAV35-201ENST00000390462 CHL1O00533 1208 aa7.16□□□□□ -1.26
TRAV35-201ENST00000390462 SPTLC2O15270 562 aa7.16□□□□□ -1.26
TRAV35-201ENST00000390462 ASNA1O43681 348 aa7.16□□□□□ -1.26
TRAV35-201ENST00000390462 CBX7O95931 251 aa7.16□□□□□ -1.26
TRAV35-201ENST00000390462 CELA3BP08861 270 aa7.16□□□□□ -1.26
TRAV35-201ENST00000390462 PTPN1P18031 435 aaKnown RBP7.16□□□□□ -1.26
TRAV35-201ENST00000390462 CCR9P51686 369 aa7.16□□□□□ -1.26
TRAV35-201ENST00000390462 PRKAA2P54646 552 aa7.16□□□□□ -1.26
TRAV35-201ENST00000390462 TMF1P82094 1093 aa7.16□□□□□ -1.26
TRAV35-201ENST00000390462 EIF4A2Q14240 407 aaKnown RBP7.16□□□□□ -1.26
TRAV35-201ENST00000390462 TARBP2Q15633 366 aaKnown RBP7.16□□□□□ -1.26
TRAV35-201ENST00000390462 AOC3Q16853 763 aa7.16□□□□□ -1.26
TRAV35-201ENST00000390462 VWA3BQ502W6 1294 aa7.16□□□□□ -1.26
TRAV35-201ENST00000390462 MAP3K21Q5TCX8 1036 aa7.16□□□□□ -1.26
TRAV35-201ENST00000390462 PRAMEF9Q5VWM5 478 aa7.16□□□□□ -1.26
TRAV35-201ENST00000390462 KIAA1211Q6ZU35 1233 aa7.16□□□□□ -1.26
TRAV35-201ENST00000390462 C8orf86Q6ZUL3 223 aa7.16□□□□□ -1.26
TRAV35-201ENST00000390462 ERC1Q8IUD2 1116 aa7.16□□□□□ -1.26
TRAV35-201ENST00000390462 CILP2Q8IUL8 1156 aa7.16□□□□□ -1.26
TRAV35-201ENST00000390462 RHOT1Q8IXI2 618 aa7.16□□□□□ -1.26
TRAV35-201ENST00000390462 DMRTC2Q8IXT2 367 aaPredicted RBP7.16□□□□□ -1.26
TRAV35-201ENST00000390462 LINC00116Q8NCU8 138 aa7.16□□□□□ -1.26
TRAV35-201ENST00000390462 KBTBD7Q8WVZ9 684 aa7.16□□□□□ -1.26
TRAV35-201ENST00000390462 ACDQ96AP0 544 aa7.16□□□□□ -1.26
TRAV35-201ENST00000390462 TRIM43Q96BQ3 446 aaPredicted RBP7.16□□□□□ -1.26
TRAV35-201ENST00000390462 GBP4Q96PP9 640 aa7.16□□□□□ -1.26
TRAV35-201ENST00000390462 TWNKQ96RR1 684 aa7.16□□□□□ -1.26
TRAV35-201ENST00000390462 PRPF18Q99633 342 aaKnown RBP7.16□□□□□ -1.26
TRAV35-201ENST00000390462 VRK1Q99986 396 aaPredicted RBP7.16□□□□□ -1.26
TRAV35-201ENST00000390462 ADAM7Q9H2U9 754 aa7.16□□□□□ -1.26
TRAV35-201ENST00000390462 PRDM13Q9H4Q3 707 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms