RNA–Protein interactions for RNA: ENST00000389704.3

EXOSC8-202, Transcript of exosome component 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC8, Length 1,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC8-202ENST00000389704 SF3A1Q15459 793 aaKnown RBP18.31■□□□□ 0.52
EXOSC8-202ENST00000389704 SLC10A6Q3KNW5 377 aa18.31■□□□□ 0.52
EXOSC8-202ENST00000389704 SLC8B1Q6J4K2 584 aa18.31■□□□□ 0.52
EXOSC8-202ENST00000389704 MYCT1Q8N699 235 aa18.31■□□□□ 0.52
EXOSC8-202ENST00000389704 PARVGQ9HBI0 331 aa18.31■□□□□ 0.52
EXOSC8-202ENST00000389704 VPS37CA5D8V6 355 aaPredicted RBP18.3■□□□□ 0.52
EXOSC8-202ENST00000389704 H0Y858 1186 aa18.3■□□□□ 0.52
EXOSC8-202ENST00000389704 STK25O00506 426 aa18.3■□□□□ 0.52
EXOSC8-202ENST00000389704 NARSO43776 548 aaKnown RBP18.3■□□□□ 0.52
EXOSC8-202ENST00000389704 CFHP08603 1231 aa18.3■□□□□ 0.52
EXOSC8-202ENST00000389704 AOC1P19801 751 aa18.3■□□□□ 0.52
EXOSC8-202ENST00000389704 LIG4P49917 911 aa18.3■□□□□ 0.52
EXOSC8-202ENST00000389704 CUL4AQ13619 759 aa18.3■□□□□ 0.52
EXOSC8-202ENST00000389704 VARS2Q5ST30 1063 aaKnown RBP18.3■□□□□ 0.52
EXOSC8-202ENST00000389704 RSPO2Q6UXX9 243 aaPredicted RBP18.3■□□□□ 0.52
EXOSC8-202ENST00000389704 APPL2Q8NEU8 664 aa18.3■□□□□ 0.52
EXOSC8-202ENST00000389704 C18orf25Q96B23 403 aaPredicted RBP18.3■□□□□ 0.52
EXOSC8-202ENST00000389704 TSPAN18Q96SJ8 248 aa18.3■□□□□ 0.52
EXOSC8-202ENST00000389704 REEP2Q9BRK0 252 aa18.3■□□□□ 0.52
EXOSC8-202ENST00000389704 KCNH3Q9ULD8 1083 aa18.3■□□□□ 0.52
EXOSC8-202ENST00000389704 ZFHX2Q9C0A1 2572 aaPredicted RBP18.3■□□□□ 0.52
EXOSC8-202ENST00000389704 HNRNPDLO14979 420 aaKnown RBP18.29■□□□□ 0.52
EXOSC8-202ENST00000389704 NPR3P17342 541 aa18.29■□□□□ 0.52
EXOSC8-202ENST00000389704 RFX1P22670 979 aa18.29■□□□□ 0.52
EXOSC8-202ENST00000389704 MARCKSP29966 332 aaPredicted RBP18.29■□□□□ 0.52
EXOSC8-202ENST00000389704 ZNF131P52739 623 aa18.29■□□□□ 0.52
EXOSC8-202ENST00000389704 HTR4Q13639 388 aa18.29■□□□□ 0.52
EXOSC8-202ENST00000389704 PABPC1LQ4VXU2 614 aaKnown RBP18.29■□□□□ 0.52
EXOSC8-202ENST00000389704 MTSS1LQ765P7 747 aa18.29■□□□□ 0.52
EXOSC8-202ENST00000389704 RAD54LQ92698 747 aa18.29■□□□□ 0.52
EXOSC8-202ENST00000389704 FGF13Q92913 245 aa18.29■□□□□ 0.52
EXOSC8-202ENST00000389704 SUSD3Q96L08 255 aa18.29■□□□□ 0.52
EXOSC8-202ENST00000389704 BLOC1S4Q9NUP1 217 aa18.29■□□□□ 0.52
EXOSC8-202ENST00000389704 TBX20Q9UMR3 447 aa18.29■□□□□ 0.52
EXOSC8-202ENST00000389704 NUMBLQ9Y6R0 609 aa18.29■□□□□ 0.52
EXOSC8-202ENST00000389704 PRRG1O14668 218 aa18.28■□□□□ 0.52
EXOSC8-202ENST00000389704 XPOTO43592 962 aaKnown RBP18.28■□□□□ 0.52
EXOSC8-202ENST00000389704 TRAK2O60296 914 aa18.28■□□□□ 0.52
EXOSC8-202ENST00000389704 TBCAO75347 108 aaKnown RBP18.28■□□□□ 0.52
EXOSC8-202ENST00000389704 ABLIM3O94929 683 aa18.28■□□□□ 0.52
EXOSC8-202ENST00000389704 LRG1P02750 347 aa18.28■□□□□ 0.52
EXOSC8-202ENST00000389704 ATF2P15336 505 aa18.28■□□□□ 0.52
EXOSC8-202ENST00000389704 PLCG1P19174 1290 aa18.28■□□□□ 0.52
EXOSC8-202ENST00000389704 CYP3A5P20815 502 aa18.28■□□□□ 0.52
EXOSC8-202ENST00000389704 MCM4P33991 863 aa18.28■□□□□ 0.52
EXOSC8-202ENST00000389704 DDIT3P35638 169 aa18.28■□□□□ 0.52
EXOSC8-202ENST00000389704 NTHL1P78549 312 aa18.28■□□□□ 0.52
EXOSC8-202ENST00000389704 ROR1Q01973 937 aa18.28■□□□□ 0.52
EXOSC8-202ENST00000389704 MRPL58Q14197 206 aaKnown RBP18.28■□□□□ 0.52
EXOSC8-202ENST00000389704 MCM6Q14566 821 aa18.28■□□□□ 0.52
EXOSC8-202ENST00000389704 KARSQ15046 597 aaKnown RBP18.28■□□□□ 0.52
EXOSC8-202ENST00000389704 SEZ6Q53EL9 994 aa18.28■□□□□ 0.52
EXOSC8-202ENST00000389704 TPGS2Q68CL5 300 aa18.28■□□□□ 0.52
EXOSC8-202ENST00000389704 CWF19L1Q69YN2 538 aaKnown RBP18.28■□□□□ 0.52
EXOSC8-202ENST00000389704 LARP4BQ92615 738 aaKnown RBP18.28■□□□□ 0.52
EXOSC8-202ENST00000389704 PHOX2BQ99453 314 aa18.28■□□□□ 0.52
EXOSC8-202ENST00000389704 CCSER1Q9C0I3 900 aa18.28■□□□□ 0.52
EXOSC8-202ENST00000389704 ZHX3Q9H4I2 956 aa18.28■□□□□ 0.52
EXOSC8-202ENST00000389704 SLC2A4RGQ9NR83 387 aa18.28■□□□□ 0.52
EXOSC8-202ENST00000389704 DNMT3BQ9UBC3 853 aaKnown RBP18.28■□□□□ 0.52
EXOSC8-202ENST00000389704 MAFFQ9ULX9 164 aa18.28■□□□□ 0.52
EXOSC8-202ENST00000389704 UBQLN1Q9UMX0 589 aaKnown RBP18.28■□□□□ 0.52
EXOSC8-202ENST00000389704 DENND4AQ7Z401 1863 aa18.28■□□□□ 0.52
EXOSC8-202ENST00000389704 PLXNA3P51805 1871 aa18.27■□□□□ 0.52
EXOSC8-202ENST00000389704 TTC26A0AVF1 554 aa18.27■□□□□ 0.52
EXOSC8-202ENST00000389704 K7ENM7 598 aa18.27■□□□□ 0.52
EXOSC8-202ENST00000389704 MEFVO15553 781 aaPredicted RBP18.27■□□□□ 0.52
EXOSC8-202ENST00000389704 TBC1D4O60343 1298 aa18.27■□□□□ 0.52
EXOSC8-202ENST00000389704 PIGRP01833 764 aa18.27■□□□□ 0.52
EXOSC8-202ENST00000389704 CXCL8P10145 99 aa18.27■□□□□ 0.52
EXOSC8-202ENST00000389704 ARPP19P56211 112 aa18.27■□□□□ 0.52
EXOSC8-202ENST00000389704 PPP2R3AQ06190 1150 aa18.27■□□□□ 0.52
EXOSC8-202ENST00000389704 CTXN3Q4LDR2 81 aa18.27■□□□□ 0.52
EXOSC8-202ENST00000389704 ZNF280DQ6N043 979 aa18.27■□□□□ 0.52
EXOSC8-202ENST00000389704 CD302Q8IX05 232 aa18.27■□□□□ 0.52
EXOSC8-202ENST00000389704 TCEAL8Q8IYN2 117 aa18.27■□□□□ 0.52
EXOSC8-202ENST00000389704 KRI1Q8N9T8 703 aaKnown RBP18.27■□□□□ 0.52
EXOSC8-202ENST00000389704 GPR152Q8TDT2 470 aa18.27■□□□□ 0.52
EXOSC8-202ENST00000389704 KIF12Q96FN5 646 aa18.27■□□□□ 0.52
EXOSC8-202ENST00000389704 OXCT2Q9BYC2 517 aaPredicted RBP18.27■□□□□ 0.52
EXOSC8-202ENST00000389704 RPF1Q9H9Y2 349 aaKnown RBP18.27■□□□□ 0.52
EXOSC8-202ENST00000389704 FAM86C1Q9NVL1 165 aa18.27■□□□□ 0.52
EXOSC8-202ENST00000389704 CCDC39Q9UFE4 941 aa18.27■□□□□ 0.52
EXOSC8-202ENST00000389704 FBXL5Q9UKA1 691 aa18.27■□□□□ 0.52
EXOSC8-202ENST00000389704 MRPS23Q9Y3D9 190 aaKnown RBP18.27■□□□□ 0.52
EXOSC8-202ENST00000389704 ARHGEF37A1IGU5 675 aa18.26■□□□□ 0.51
EXOSC8-202ENST00000389704 KRBA1A5PL33 1030 aa18.26■□□□□ 0.51
EXOSC8-202ENST00000389704 OGTO15294 1046 aa18.26■□□□□ 0.51
EXOSC8-202ENST00000389704 PI15O43692 258 aa18.26■□□□□ 0.51
EXOSC8-202ENST00000389704 PTPN2P17706 415 aa18.26■□□□□ 0.51
EXOSC8-202ENST00000389704 LRPAP1P30533 357 aa18.26■□□□□ 0.51
EXOSC8-202ENST00000389704 GRIN1Q05586 938 aa18.26■□□□□ 0.51
EXOSC8-202ENST00000389704 ZBTB6Q15916 424 aa18.26■□□□□ 0.51
EXOSC8-202ENST00000389704 PARM1Q6UWI2 310 aa18.26■□□□□ 0.51
EXOSC8-202ENST00000389704 ITFG1Q8TB96 612 aa18.26■□□□□ 0.51
EXOSC8-202ENST00000389704 DDX12PQ92771 950 aa18.26■□□□□ 0.51
EXOSC8-202ENST00000389704 FGF14Q92915 247 aa18.26■□□□□ 0.51
EXOSC8-202ENST00000389704 SHDQ96IW2 340 aa18.26■□□□□ 0.51
EXOSC8-202ENST00000389704 HAPLN2Q9GZV7 340 aa18.26■□□□□ 0.51
EXOSC8-202ENST00000389704 CYP4F11Q9HBI6 524 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms