RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 ATXN2LQ8WWM7 1075 aaKnown RBP13.88□□□□□ -0.19
TRAPPC9-201ENST00000389328 CENPTQ96BT3 561 aa13.88□□□□□ -0.19
TRAPPC9-201ENST00000389328 MANSC1Q9H8J5 431 aa13.88□□□□□ -0.19
TRAPPC9-201ENST00000389328 WHRNQ9P202 907 aa13.88□□□□□ -0.19
TRAPPC9-201ENST00000389328 TRAF3IP3Q9Y228 551 aa13.88□□□□□ -0.19
TRAPPC9-201ENST00000389328 GPR75-ASB3A0A0A6YYF3 556 aa13.88□□□□□ -0.19
TRAPPC9-201ENST00000389328 A6NJR5 290 aa13.88□□□□□ -0.19
TRAPPC9-201ENST00000389328 PAPOLAP51003 745 aaKnown RBP13.88□□□□□ -0.19
TRAPPC9-201ENST00000389328 IRF2BP2Q7Z5L9 587 aa13.88□□□□□ -0.19
TRAPPC9-201ENST00000389328 SLC47A2Q86VL8 602 aa13.88□□□□□ -0.19
TRAPPC9-201ENST00000389328 TTC13Q8NBP0 860 aa13.88□□□□□ -0.19
TRAPPC9-201ENST00000389328 RNF34Q969K3 372 aa13.88□□□□□ -0.19
TRAPPC9-201ENST00000389328 FGFBP2Q9BYJ0 223 aa13.88□□□□□ -0.19
TRAPPC9-201ENST00000389328 DCLRE1BQ9H816 532 aa13.88□□□□□ -0.19
TRAPPC9-201ENST00000389328 H0YIN7 160 aa13.88□□□□□ -0.19
TRAPPC9-201ENST00000389328 PRKG1Q13976 671 aa13.88□□□□□ -0.19
TRAPPC9-201ENST00000389328 AGR3Q8TD06 166 aa13.88□□□□□ -0.19
TRAPPC9-201ENST00000389328 WWP1Q9H0M0 922 aa13.88□□□□□ -0.19
TRAPPC9-201ENST00000389328 KRT16P08779 473 aa13.88□□□□□ -0.19
TRAPPC9-201ENST00000389328 P4HA1P13674 534 aa13.88□□□□□ -0.19
TRAPPC9-201ENST00000389328 TAL1P17542 331 aaPredicted RBP13.88□□□□□ -0.19
TRAPPC9-201ENST00000389328 GARSP41250 739 aaKnown RBP13.88□□□□□ -0.19
TRAPPC9-201ENST00000389328 XRCC4Q13426 336 aa13.88□□□□□ -0.19
TRAPPC9-201ENST00000389328 MED21Q13503 144 aa13.88□□□□□ -0.19
TRAPPC9-201ENST00000389328 HIC1Q14526 733 aa13.88□□□□□ -0.19
TRAPPC9-201ENST00000389328 PPP1R2P3Q6NXS1 205 aa13.88□□□□□ -0.19
TRAPPC9-201ENST00000389328 ARHGAP18Q8N392 663 aa13.88□□□□□ -0.19
TRAPPC9-201ENST00000389328 CYP2W1Q8TAV3 490 aa13.88□□□□□ -0.19
TRAPPC9-201ENST00000389328 MPHOSPH6Q99547 160 aaKnown RBP13.88□□□□□ -0.19
TRAPPC9-201ENST00000389328 MYLK2Q9H1R3 596 aa13.88□□□□□ -0.19
TRAPPC9-201ENST00000389328 PARVAQ9NVD7 372 aa13.88□□□□□ -0.19
TRAPPC9-201ENST00000389328 C3P01024 1663 aa13.87□□□□□ -0.19
TRAPPC9-201ENST00000389328 INO80B-WBP1J3KQ70 363 aa13.87□□□□□ -0.19
TRAPPC9-201ENST00000389328 INO80BQ9C086 356 aaPredicted RBP13.87□□□□□ -0.19
TRAPPC9-201ENST00000389328 GPC4O75487 556 aa13.87□□□□□ -0.19
TRAPPC9-201ENST00000389328 ECE1P42892 770 aa13.87□□□□□ -0.19
TRAPPC9-201ENST00000389328 ART3Q13508 389 aa13.87□□□□□ -0.19
TRAPPC9-201ENST00000389328 MOV10L1Q9BXT6 1211 aaKnown RBP13.87□□□□□ -0.19
TRAPPC9-201ENST00000389328 ACP6Q9NPH0 428 aa13.87□□□□□ -0.19
TRAPPC9-201ENST00000389328 PICK1Q9NRD5 415 aa13.87□□□□□ -0.19
TRAPPC9-201ENST00000389328 CALB1P05937 261 aa13.87□□□□□ -0.19
TRAPPC9-201ENST00000389328 ACOT2P49753 483 aa13.87□□□□□ -0.19
TRAPPC9-201ENST00000389328 CBWD6Q4V339 395 aa13.87□□□□□ -0.19
TRAPPC9-201ENST00000389328 CBWD3Q5JTY5 395 aa13.87□□□□□ -0.19
TRAPPC9-201ENST00000389328 CBWD5Q5RIA9 395 aa13.87□□□□□ -0.19
TRAPPC9-201ENST00000389328 DUPD1Q68J44 220 aa13.87□□□□□ -0.19
TRAPPC9-201ENST00000389328 CRELD2Q6UXH1 353 aaPredicted RBP13.87□□□□□ -0.19
TRAPPC9-201ENST00000389328 BZW1Q7L1Q6 419 aaKnown RBP13.87□□□□□ -0.19
TRAPPC9-201ENST00000389328 AFAP1L2Q8N4X5 818 aa13.87□□□□□ -0.19
TRAPPC9-201ENST00000389328 DCLK2Q8N568 766 aa13.87□□□□□ -0.19
TRAPPC9-201ENST00000389328 LNX1Q8TBB1 728 aaPredicted RBP13.87□□□□□ -0.19
TRAPPC9-201ENST00000389328 CCT6BQ92526 530 aa13.87□□□□□ -0.19
TRAPPC9-201ENST00000389328 OLFM3Q96PB7 478 aa13.87□□□□□ -0.19
TRAPPC9-201ENST00000389328 FAM111AQ96PZ2 611 aa13.87□□□□□ -0.19
TRAPPC9-201ENST00000389328 KIFC3Q9BVG8 833 aa13.87□□□□□ -0.19
TRAPPC9-201ENST00000389328 SHCBP1LQ9BZQ2 653 aa13.87□□□□□ -0.19
TRAPPC9-201ENST00000389328 VPS11Q9H270 941 aa13.87□□□□□ -0.19
TRAPPC9-201ENST00000389328 THEGQ9P2T0 379 aa13.87□□□□□ -0.19
TRAPPC9-201ENST00000389328 HESX1Q9UBX0 185 aa13.87□□□□□ -0.19
TRAPPC9-201ENST00000389328 MST1RQ04912 1400 aa13.87□□□□□ -0.19
TRAPPC9-201ENST00000389328 CRCPO75575 148 aa13.86□□□□□ -0.19
TRAPPC9-201ENST00000389328 NOL4O94818 638 aa13.86□□□□□ -0.19
TRAPPC9-201ENST00000389328 HSPA4LO95757 839 aa13.86□□□□□ -0.19
TRAPPC9-201ENST00000389328 RRM1P23921 792 aa13.86□□□□□ -0.19
TRAPPC9-201ENST00000389328 SNX16P57768 344 aa13.86□□□□□ -0.19
TRAPPC9-201ENST00000389328 EXOC3L1Q86VI1 746 aa13.86□□□□□ -0.19
TRAPPC9-201ENST00000389328 ARID3BQ8IVW6 561 aaPredicted RBP13.86□□□□□ -0.19
TRAPPC9-201ENST00000389328 THNSL1Q8IYQ7 743 aa13.86□□□□□ -0.19
TRAPPC9-201ENST00000389328 RIBC1Q8N443 379 aaPredicted RBP13.86□□□□□ -0.19
TRAPPC9-201ENST00000389328 PRELID2Q8N945 189 aa13.86□□□□□ -0.19
TRAPPC9-201ENST00000389328 DNAAF3Q8N9W5 541 aa13.86□□□□□ -0.19
TRAPPC9-201ENST00000389328 DHX38Q92620 1227 aaKnown RBP13.86□□□□□ -0.19
TRAPPC9-201ENST00000389328 KLC2Q9H0B6 622 aa13.86□□□□□ -0.19
TRAPPC9-201ENST00000389328 ATXN2Q99700 1313 aaKnown RBP13.86□□□□□ -0.19
TRAPPC9-201ENST00000389328 A8MUI8 341 aa13.86□□□□□ -0.19
TRAPPC9-201ENST00000389328 MX2P20592 715 aa13.86□□□□□ -0.19
TRAPPC9-201ENST00000389328 PRKCIP41743 596 aa13.86□□□□□ -0.19
TRAPPC9-201ENST00000389328 PTK7Q13308 1070 aa13.86□□□□□ -0.19
TRAPPC9-201ENST00000389328 CBWD2Q8IUF1 395 aa13.86□□□□□ -0.19
TRAPPC9-201ENST00000389328 ICA1LQ8NDH6 482 aa13.86□□□□□ -0.19
TRAPPC9-201ENST00000389328 MCEEQ96PE7 176 aa13.86□□□□□ -0.19
TRAPPC9-201ENST00000389328 APOL6Q9BWW8 343 aa13.86□□□□□ -0.19
TRAPPC9-201ENST00000389328 CYP11B1P15538 503 aa13.86□□□□□ -0.19
TRAPPC9-201ENST00000389328 HMGB2P26583 209 aaKnown RBP13.86□□□□□ -0.19
TRAPPC9-201ENST00000389328 YWHABP31946 246 aaKnown RBP13.86□□□□□ -0.19
TRAPPC9-201ENST00000389328 PSMC1P62191 440 aaKnown RBP13.86□□□□□ -0.19
TRAPPC9-201ENST00000389328 ECM1Q16610 540 aa13.86□□□□□ -0.19
TRAPPC9-201ENST00000389328 SMTNL2Q2TAL5 461 aa13.86□□□□□ -0.19
TRAPPC9-201ENST00000389328 ACAD10Q6JQN1 1059 aa13.86□□□□□ -0.19
TRAPPC9-201ENST00000389328 ENOSF1Q7L5Y1 443 aa13.86□□□□□ -0.19
TRAPPC9-201ENST00000389328 LRRC43Q8N309 656 aa13.86□□□□□ -0.19
TRAPPC9-201ENST00000389328 ALG3Q92685 438 aa13.86□□□□□ -0.19
TRAPPC9-201ENST00000389328 RMDN3Q96TC7 470 aa13.86□□□□□ -0.19
TRAPPC9-201ENST00000389328 DNAJC18Q9H819 358 aa13.86□□□□□ -0.19
TRAPPC9-201ENST00000389328 CHST7Q9NS84 486 aa13.86□□□□□ -0.19
TRAPPC9-201ENST00000389328 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.86□□□□□ -0.19
TRAPPC9-201ENST00000389328 ZBTB39O15060 712 aa13.86□□□□□ -0.19
TRAPPC9-201ENST00000389328 RASSF9O75901 435 aa13.86□□□□□ -0.19
TRAPPC9-201ENST00000389328 SNUPNO95149 360 aaKnown RBP13.86□□□□□ -0.19
TRAPPC9-201ENST00000389328 SRGAP2CP0DJJ0 459 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms