RNA–Protein interactions for RNA: ENST00000382515.6

CD9-202, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-202ENST00000382515 DPP3Q9NY33 737 aa19.12■□□□□ 0.65
CD9-202ENST00000382515 ARHGEF37A1IGU5 675 aa19.11■□□□□ 0.65
CD9-202ENST00000382515 CASTOR2A6NHX0 329 aa19.11■□□□□ 0.65
CD9-202ENST00000382515 PODXLO00592 558 aa19.11■□□□□ 0.65
CD9-202ENST00000382515 STX10O60499 249 aa19.11■□□□□ 0.65
CD9-202ENST00000382515 AKAP3O75969 853 aa19.11■□□□□ 0.65
CD9-202ENST00000382515 TNNC2P02585 160 aa19.11■□□□□ 0.65
CD9-202ENST00000382515 TNNI1P19237 187 aa19.11■□□□□ 0.65
CD9-202ENST00000382515 PNPLA4P41247 253 aa19.11■□□□□ 0.65
CD9-202ENST00000382515 CLCNKBP51801 687 aa19.11■□□□□ 0.65
CD9-202ENST00000382515 TFAMQ00059 246 aaKnown RBP19.11■□□□□ 0.65
CD9-202ENST00000382515 FRMD5Q7Z6J6 570 aa19.11■□□□□ 0.65
CD9-202ENST00000382515 FAM186BQ8IYM0 893 aa19.11■□□□□ 0.65
CD9-202ENST00000382515 CSGALNACT2Q8N6G5 542 aa19.11■□□□□ 0.65
CD9-202ENST00000382515 POF1BQ8WVV4 589 aa19.11■□□□□ 0.65
CD9-202ENST00000382515 PPP2R3CQ969Q6 453 aa19.11■□□□□ 0.65
CD9-202ENST00000382515 C18orf25Q96B23 403 aaPredicted RBP19.11■□□□□ 0.65
CD9-202ENST00000382515 MRPL38Q96DV4 380 aaKnown RBP19.11■□□□□ 0.65
CD9-202ENST00000382515 PRDM12Q9H4Q4 367 aa19.11■□□□□ 0.65
CD9-202ENST00000382515 HCSTQ9UBK5 93 aa19.11■□□□□ 0.65
CD9-202ENST00000382515 ITGA11Q9UKX5 1188 aa19.11■□□□□ 0.65
CD9-202ENST00000382515 PRG3Q9Y2Y8 225 aaPredicted RBP19.11■□□□□ 0.65
CD9-202ENST00000382515 SF3B1O75533 1304 aaKnown RBP eCLIP19.1■□□□□ 0.65
CD9-202ENST00000382515 CHD9Q3L8U1 2897 aa19.1■□□□□ 0.65
CD9-202ENST00000382515 ANO9A1A5B4 782 aa19.1■□□□□ 0.65
CD9-202ENST00000382515 NT5C1B-RDH14C9J2C7 533 aa19.1■□□□□ 0.65
CD9-202ENST00000382515 PIRO00625 290 aa19.1■□□□□ 0.65
CD9-202ENST00000382515 B4GALT3O60512 393 aa19.1■□□□□ 0.65
CD9-202ENST00000382515 EFEMP2O95967 443 aa19.1■□□□□ 0.65
CD9-202ENST00000382515 NFICP08651 508 aa19.1■□□□□ 0.65
CD9-202ENST00000382515 TMEM191BP0C7N4 346 aa19.1■□□□□ 0.65
CD9-202ENST00000382515 GTF2H1P32780 548 aa19.1■□□□□ 0.65
CD9-202ENST00000382515 CASP4P49662 377 aa19.1■□□□□ 0.65
CD9-202ENST00000382515 VAMP7P51809 220 aa19.1■□□□□ 0.65
CD9-202ENST00000382515 PMS1P54277 932 aaKnown RBP19.1■□□□□ 0.65
CD9-202ENST00000382515 RBP5P82980 135 aa19.1■□□□□ 0.65
CD9-202ENST00000382515 SOX4Q06945 474 aaPredicted RBP19.1■□□□□ 0.65
CD9-202ENST00000382515 NFKBIBQ15653 356 aa19.1■□□□□ 0.65
CD9-202ENST00000382515 PDXDC1Q6P996 788 aa19.1■□□□□ 0.65
CD9-202ENST00000382515 CCDC127Q96BQ5 260 aa19.1■□□□□ 0.65
CD9-202ENST00000382515 CGRRF1Q99675 332 aa19.1■□□□□ 0.65
CD9-202ENST00000382515 DUSP9Q99956 384 aaKnown RBP19.1■□□□□ 0.65
CD9-202ENST00000382515 NAT10Q9H0A0 1025 aaKnown RBP19.1■□□□□ 0.65
CD9-202ENST00000382515 ALG13Q9NP73 1137 aaKnown RBP19.1■□□□□ 0.65
CD9-202ENST00000382515 TLR9Q9NR96 1032 aa19.1■□□□□ 0.65
CD9-202ENST00000382515 IRAK3Q9Y616 596 aa19.1■□□□□ 0.65
CD9-202ENST00000382515 FSD2A1L4K1 749 aa19.09■□□□□ 0.65
CD9-202ENST00000382515 GRM6O15303 877 aa19.09■□□□□ 0.65
CD9-202ENST00000382515 LPXNO60711 386 aa19.09■□□□□ 0.65
CD9-202ENST00000382515 SOD2P04179 222 aa19.09■□□□□ 0.65
CD9-202ENST00000382515 DLATP10515 647 aaKnown RBP19.09■□□□□ 0.65
CD9-202ENST00000382515 SPAG1Q07617 926 aa19.09■□□□□ 0.65
CD9-202ENST00000382515 STX1AQ16623 288 aa19.09■□□□□ 0.65
CD9-202ENST00000382515 USP41Q3LFD5 358 aa19.09■□□□□ 0.65
CD9-202ENST00000382515 C9orf57Q5W0N0 161 aa19.09■□□□□ 0.65
CD9-202ENST00000382515 EFCAB13Q8IY85 973 aa19.09■□□□□ 0.65
CD9-202ENST00000382515 RNF168Q8IYW5 571 aaPredicted RBP19.09■□□□□ 0.65
CD9-202ENST00000382515 LRRC52Q8N7C0 313 aa19.09■□□□□ 0.65
CD9-202ENST00000382515 BORCS6Q96GS4 357 aa19.09■□□□□ 0.65
CD9-202ENST00000382515 CDX2Q99626 313 aaPredicted RBP19.09■□□□□ 0.65
CD9-202ENST00000382515 CHST7Q9NS84 486 aa19.09■□□□□ 0.65
CD9-202ENST00000382515 MARCH5Q9NX47 278 aa19.09■□□□□ 0.65
CD9-202ENST00000382515 ARMCX3Q9UH62 379 aaPredicted RBP19.09■□□□□ 0.65
CD9-202ENST00000382515 CTNND2Q9UQB3 1225 aa19.09■□□□□ 0.65
CD9-202ENST00000382515 NUB1Q9Y5A7 615 aa19.09■□□□□ 0.65
CD9-202ENST00000382515 FNDC1Q4ZHG4 1894 aaPredicted RBP19.08■□□□□ 0.65
CD9-202ENST00000382515 NCK2O43639 380 aa19.08■□□□□ 0.64
CD9-202ENST00000382515 CAVIN2O95810 425 aa19.08■□□□□ 0.64
CD9-202ENST00000382515 CCDC192P0DO97 292 aa19.08■□□□□ 0.64
CD9-202ENST00000382515 CTSAP10619 480 aa19.08■□□□□ 0.64
CD9-202ENST00000382515 PBX3P40426 434 aa19.08■□□□□ 0.64
CD9-202ENST00000382515 MARSP56192 900 aaKnown RBP19.08■□□□□ 0.64
CD9-202ENST00000382515 BFSP1Q12934 665 aa19.08■□□□□ 0.64
CD9-202ENST00000382515 DPCR1Q3MIW9 517 aa19.08■□□□□ 0.64
CD9-202ENST00000382515 FUT10Q6P4F1 479 aa19.08■□□□□ 0.64
CD9-202ENST00000382515 TMC7Q7Z402 723 aa19.08■□□□□ 0.64
CD9-202ENST00000382515 SPRED2Q7Z698 418 aa19.08■□□□□ 0.64
CD9-202ENST00000382515 VPS52Q8N1B4 723 aa19.08■□□□□ 0.64
CD9-202ENST00000382515 ENOX1Q8TC92 643 aaKnown RBP19.08■□□□□ 0.64
CD9-202ENST00000382515 MICAL1Q8TDZ2 1067 aa19.08■□□□□ 0.64
CD9-202ENST00000382515 PAAF1Q9BRP4 392 aa19.08■□□□□ 0.64
CD9-202ENST00000382515 SRRTQ9BXP5 876 aaKnown RBP19.08■□□□□ 0.64
CD9-202ENST00000382515 OXCT2Q9BYC2 517 aaPredicted RBP19.08■□□□□ 0.64
CD9-202ENST00000382515 TUBGCP4Q9UGJ1 667 aa19.08■□□□□ 0.64
CD9-202ENST00000382515 PTPRSQ13332 1948 aa19.08■□□□□ 0.64
CD9-202ENST00000382515 TRIM49BA6NDI0 452 aa19.07■□□□□ 0.64
CD9-202ENST00000382515 EPOPA6NHQ4 379 aa19.07■□□□□ 0.64
CD9-202ENST00000382515 SYN3O14994 580 aa19.07■□□□□ 0.64
CD9-202ENST00000382515 KIF4AO95239 1232 aa19.07■□□□□ 0.64
CD9-202ENST00000382515 C1RP00736 705 aa19.07■□□□□ 0.64
CD9-202ENST00000382515 LILRA4P59901 499 aa19.07■□□□□ 0.64
CD9-202ENST00000382515 CREMQ03060 361 aa19.07■□□□□ 0.64
CD9-202ENST00000382515 MYO1EQ12965 1108 aa19.07■□□□□ 0.64
CD9-202ENST00000382515 SMC1AQ14683 1233 aaKnown RBP19.07■□□□□ 0.64
CD9-202ENST00000382515 TPD52L1Q16890 204 aaPredicted RBP19.07■□□□□ 0.64
CD9-202ENST00000382515 TIGD5Q53EQ6 642 aa19.07■□□□□ 0.64
CD9-202ENST00000382515 KIAA1841Q6NSI8 718 aa19.07■□□□□ 0.64
CD9-202ENST00000382515 TRAPPC11Q7Z392 1133 aa19.07■□□□□ 0.64
CD9-202ENST00000382515 TMEM173Q86WV6 379 aaPredicted RBP19.07■□□□□ 0.64
CD9-202ENST00000382515 MRPL43Q8N983 215 aaKnown RBP19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms