RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 MYL3P08590 195 aa18.11■□□□□ 0.49
SGCB-201ENST00000381431 ZNF280CQ8ND82 737 aa18.11■□□□□ 0.49
SGCB-201ENST00000381431 FBXO25Q8TCJ0 367 aa18.11■□□□□ 0.49
SGCB-201ENST00000381431 IL17RAQ96F46 866 aa18.11■□□□□ 0.49
SGCB-201ENST00000381431 MARCOQ9UEW3 520 aaPredicted RBP18.11■□□□□ 0.49
SGCB-201ENST00000381431 SGPL1O95470 568 aa18.11■□□□□ 0.49
SGCB-201ENST00000381431 MUM1L1Q5H9M0 696 aa18.11■□□□□ 0.49
SGCB-201ENST00000381431 SLC13A5Q86YT5 568 aaPredicted RBP18.11■□□□□ 0.49
SGCB-201ENST00000381431 TIPINQ9BVW5 301 aa18.11■□□□□ 0.49
SGCB-201ENST00000381431 CST8O60676 142 aa18.11■□□□□ 0.49
SGCB-201ENST00000381431 LCP1P13796 627 aa18.11■□□□□ 0.49
SGCB-201ENST00000381431 KPNA2P52292 529 aaKnown RBP18.11■□□□□ 0.49
SGCB-201ENST00000381431 RCOR2Q8IZ40 523 aa18.11■□□□□ 0.49
SGCB-201ENST00000381431 KIF2BQ8N4N8 673 aa18.11■□□□□ 0.49
SGCB-201ENST00000381431 MOV10L1Q9BXT6 1211 aaKnown RBP18.11■□□□□ 0.49
SGCB-201ENST00000381431 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.11■□□□□ 0.49
SGCB-201ENST00000381431 FAM107AO95990 144 aa18.1■□□□□ 0.49
SGCB-201ENST00000381431 RBP3P10745 1247 aa18.1■□□□□ 0.49
SGCB-201ENST00000381431 SAMD7Q7Z3H4 446 aa18.1■□□□□ 0.49
SGCB-201ENST00000381431 TEX2Q8IWB9 1127 aa18.1■□□□□ 0.49
SGCB-201ENST00000381431 PNMA5Q96PV4 448 aa18.1■□□□□ 0.49
SGCB-201ENST00000381431 POP1Q99575 1024 aaKnown RBP18.1■□□□□ 0.49
SGCB-201ENST00000381431 NCAPGQ9BPX3 1015 aa18.1■□□□□ 0.49
SGCB-201ENST00000381431 CHMP2BQ9UQN3 213 aa18.1■□□□□ 0.49
SGCB-201ENST00000381431 USP15Q9Y4E8 981 aaPredicted RBP18.1■□□□□ 0.49
SGCB-201ENST00000381431 CCDC78A2IDD5 438 aa18.1■□□□□ 0.49
SGCB-201ENST00000381431 ATP9BO43861 1147 aa18.1■□□□□ 0.49
SGCB-201ENST00000381431 ACTR2P61160 394 aa18.1■□□□□ 0.49
SGCB-201ENST00000381431 PTGISQ16647 500 aa18.1■□□□□ 0.49
SGCB-201ENST00000381431 KRT80Q6KB66 452 aa18.1■□□□□ 0.49
SGCB-201ENST00000381431 GTF3C4Q9UKN8 822 aa18.1■□□□□ 0.49
SGCB-201ENST00000381431 SLIT1O75093 1534 aa18.1■□□□□ 0.49
SGCB-201ENST00000381431 SASH3O75995 380 aa18.1■□□□□ 0.49
SGCB-201ENST00000381431 MOCS2O96007 188 aaPredicted RBP18.1■□□□□ 0.49
SGCB-201ENST00000381431 RAD23BP54727 409 aa18.1■□□□□ 0.49
SGCB-201ENST00000381431 COPS2P61201 443 aa18.1■□□□□ 0.49
SGCB-201ENST00000381431 MAPK7Q13164 816 aa18.1■□□□□ 0.49
SGCB-201ENST00000381431 APOBEC3FQ8IUX4 373 aaKnown RBP18.1■□□□□ 0.49
SGCB-201ENST00000381431 SDCCAG3Q96C92 435 aa18.1■□□□□ 0.49
SGCB-201ENST00000381431 SLC4A9Q96Q91 983 aa18.1■□□□□ 0.49
SGCB-201ENST00000381431 EFHD1Q9BUP0 239 aa18.1■□□□□ 0.49
SGCB-201ENST00000381431 SPATS2LQ9NUQ6 558 aaKnown RBP18.1■□□□□ 0.49
SGCB-201ENST00000381431 GTF2H1P32780 548 aa18.09■□□□□ 0.49
SGCB-201ENST00000381431 COILP38432 576 aaPredicted RBP18.09■□□□□ 0.49
SGCB-201ENST00000381431 GPAT2Q6NUI2 795 aa18.09■□□□□ 0.49
SGCB-201ENST00000381431 LRRC31Q6UY01 552 aa18.09■□□□□ 0.49
SGCB-201ENST00000381431 KCNK18Q7Z418 384 aa18.09■□□□□ 0.49
SGCB-201ENST00000381431 MMP19Q99542 508 aa18.09■□□□□ 0.49
SGCB-201ENST00000381431 GOLGA8QA0A0J9YX86 632 aa18.09■□□□□ 0.49
SGCB-201ENST00000381431 GOLGA8OA6NCC3 632 aa18.09■□□□□ 0.49
SGCB-201ENST00000381431 GOLGA8NF8WBI6 632 aa18.09■□□□□ 0.49
SGCB-201ENST00000381431 ZWINTO95229 277 aa18.09■□□□□ 0.49
SGCB-201ENST00000381431 SREBF1P36956 1147 aa18.09■□□□□ 0.49
SGCB-201ENST00000381431 MAGEA4P43358 317 aa18.09■□□□□ 0.49
SGCB-201ENST00000381431 NPHS2Q9NP85 383 aa18.09■□□□□ 0.49
SGCB-201ENST00000381431 INTS13Q9NVM9 706 aa18.09■□□□□ 0.49
SGCB-201ENST00000381431 AGBL2Q5U5Z8 902 aa18.09■□□□□ 0.49
SGCB-201ENST00000381431 ERP27Q96DN0 273 aa18.09■□□□□ 0.49
SGCB-201ENST00000381431 FSD1LQ9BXM9 530 aa18.09■□□□□ 0.49
SGCB-201ENST00000381431 GTSE1Q9NYZ3 720 aa18.09■□□□□ 0.49
SGCB-201ENST00000381431 ITGA4P13612 1032 aa18.09■□□□□ 0.49
SGCB-201ENST00000381431 AP3M2P53677 418 aa18.09■□□□□ 0.49
SGCB-201ENST00000381431 KDSRQ06136 332 aa18.09■□□□□ 0.49
SGCB-201ENST00000381431 HABP4Q5JVS0 413 aaKnown RBP18.09■□□□□ 0.49
SGCB-201ENST00000381431 TMTC4Q5T4D3 741 aa18.09■□□□□ 0.49
SGCB-201ENST00000381431 DEFB129Q9H1M3 183 aa18.09■□□□□ 0.49
SGCB-201ENST00000381431 FAM49BQ9NUQ9 324 aa18.09■□□□□ 0.49
SGCB-201ENST00000381431 TBX20Q9UMR3 447 aa18.09■□□□□ 0.49
SGCB-201ENST00000381431 TMEM131LA2VDJ0 1609 aa18.09■□□□□ 0.49
SGCB-201ENST00000381431 CFAP73A6NFT4 308 aa18.08■□□□□ 0.49
SGCB-201ENST00000381431 PDGFRBP09619 1106 aa18.08■□□□□ 0.49
SGCB-201ENST00000381431 PRLRP16471 622 aa18.08■□□□□ 0.49
SGCB-201ENST00000381431 SGSM1Q2NKQ1 1148 aa18.08■□□□□ 0.49
SGCB-201ENST00000381431 MDH1BQ5I0G3 518 aa18.08■□□□□ 0.49
SGCB-201ENST00000381431 ANGEL2Q5VTE6 544 aaKnown RBP18.08■□□□□ 0.49
SGCB-201ENST00000381431 C3orf62Q6ZUJ4 267 aa18.08■□□□□ 0.49
SGCB-201ENST00000381431 GRAMD1AQ96CP6 724 aa18.08■□□□□ 0.49
SGCB-201ENST00000381431 ACAP3Q96P50 834 aa18.08■□□□□ 0.49
SGCB-201ENST00000381431 SERPINI1Q99574 410 aa18.08■□□□□ 0.49
SGCB-201ENST00000381431 ZFATQ9P243 1243 aa18.08■□□□□ 0.49
SGCB-201ENST00000381431 FAF1Q9UNN5 650 aaPredicted RBP18.08■□□□□ 0.49
SGCB-201ENST00000381431 CDK17Q00537 523 aa18.08■□□□□ 0.48
SGCB-201ENST00000381431 RNF135Q8IUD6 432 aa18.08■□□□□ 0.48
SGCB-201ENST00000381431 ZSWIM1Q9BR11 485 aa18.08■□□□□ 0.48
SGCB-201ENST00000381431 SENP1Q9P0U3 644 aa18.08■□□□□ 0.48
SGCB-201ENST00000381431 FAM47DPA6NHR8 397 aa18.08■□□□□ 0.48
SGCB-201ENST00000381431 TAP1Q03518 808 aa18.08■□□□□ 0.48
SGCB-201ENST00000381431 EVX2Q03828 476 aa18.08■□□□□ 0.48
SGCB-201ENST00000381431 GLIS3Q8NEA6 775 aa18.08■□□□□ 0.48
SGCB-201ENST00000381431 DTX3LQ8TDB6 740 aa18.08■□□□□ 0.48
SGCB-201ENST00000381431 PABPC3Q9H361 631 aaKnown RBP18.08■□□□□ 0.48
SGCB-201ENST00000381431 ELP3Q9H9T3 547 aa18.08■□□□□ 0.48
SGCB-201ENST00000381431 BLOC1S4Q9NUP1 217 aa18.08■□□□□ 0.48
SGCB-201ENST00000381431 CLGNO14967 610 aa18.07■□□□□ 0.48
SGCB-201ENST00000381431 SLC26A4O43511 780 aa18.07■□□□□ 0.48
SGCB-201ENST00000381431 BRD2P25440 801 aaKnown RBP18.07■□□□□ 0.48
SGCB-201ENST00000381431 TMEM62Q0P6H9 643 aa18.07■□□□□ 0.48
SGCB-201ENST00000381431 HSP90AA5PQ58FG0 334 aa18.07■□□□□ 0.48
SGCB-201ENST00000381431 CYP4A22Q5TCH4 519 aa18.07■□□□□ 0.48
SGCB-201ENST00000381431 KLC3Q6P597 504 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms