RNA–Protein interactions for RNA: ENST00000380877.7

GABPB1-203, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPB1, Length 4,816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-203ENST00000380877 GOLGA8MH3BSY2 632 aa12.97□□□□□ -0.33
GABPB1-203ENST00000380877 VTNP04004 478 aa12.97□□□□□ -0.33
GABPB1-203ENST00000380877 ITGA4P13612 1032 aa12.97□□□□□ -0.33
GABPB1-203ENST00000380877 INSRRP14616 1297 aa12.97□□□□□ -0.33
GABPB1-203ENST00000380877 ITGB5P18084 799 aa12.97□□□□□ -0.33
GABPB1-203ENST00000380877 SDCCAG8Q86SQ7 713 aaPredicted RBP12.97□□□□□ -0.33
GABPB1-203ENST00000380877 IL31RAQ8NI17 732 aa12.97□□□□□ -0.33
GABPB1-203ENST00000380877 ARHGEF2Q92974 986 aaKnown RBP12.97□□□□□ -0.33
GABPB1-203ENST00000380877 MMTAG2Q9BU76 263 aaKnown RBP12.97□□□□□ -0.33
GABPB1-203ENST00000380877 F8VZ95 297 aa12.97□□□□□ -0.33
GABPB1-203ENST00000380877 CA4P22748 312 aa12.97□□□□□ -0.33
GABPB1-203ENST00000380877 BRD2P25440 801 aaKnown RBP12.97□□□□□ -0.33
GABPB1-203ENST00000380877 GYS2P54840 703 aa12.97□□□□□ -0.33
GABPB1-203ENST00000380877 ERVK-9P63128 1117 aa12.97□□□□□ -0.33
GABPB1-203ENST00000380877 CDR2Q01850 454 aa12.97□□□□□ -0.33
GABPB1-203ENST00000380877 DGKZQ13574 1117 aa12.97□□□□□ -0.33
GABPB1-203ENST00000380877 RIOX2Q8IUF8 465 aa12.97□□□□□ -0.33
GABPB1-203ENST00000380877 DNAJC19Q96DA6 116 aa12.97□□□□□ -0.33
GABPB1-203ENST00000380877 PGBD4Q96DM1 585 aa12.97□□□□□ -0.33
GABPB1-203ENST00000380877 UBIAD1Q9Y5Z9 338 aa12.97□□□□□ -0.33
GABPB1-203ENST00000380877 CAPN6Q9Y6Q1 641 aa12.97□□□□□ -0.33
GABPB1-203ENST00000380877 ZC3H11AO75152 810 aaKnown RBP eCLIP12.97□□□□□ -0.337e-7■■■■□ 23.2
GABPB1-203ENST00000380877 SGPL1O95470 568 aa12.97□□□□□ -0.33
GABPB1-203ENST00000380877 PMS2P54278 862 aa12.97□□□□□ -0.33
GABPB1-203ENST00000380877 LAMTOR4Q0VGL1 99 aa12.97□□□□□ -0.33
GABPB1-203ENST00000380877 RAPH1Q70E73 1250 aa12.97□□□□□ -0.33
GABPB1-203ENST00000380877 PCGF5Q86SE9 256 aa12.97□□□□□ -0.33
GABPB1-203ENST00000380877 SPATS2Q86XZ4 545 aaKnown RBP12.97□□□□□ -0.33
GABPB1-203ENST00000380877 C4orf32Q8N8J7 132 aa12.97□□□□□ -0.33
GABPB1-203ENST00000380877 ETNPPLQ8TBG4 499 aa12.97□□□□□ -0.33
GABPB1-203ENST00000380877 PURBQ96QR8 312 aaKnown RBP12.97□□□□□ -0.33
GABPB1-203ENST00000380877 ZBED2Q9BTP6 218 aa12.97□□□□□ -0.33
GABPB1-203ENST00000380877 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.97□□□□□ -0.33
GABPB1-203ENST00000380877 SPDYE16A6NNV3 312 aaPredicted RBP12.96□□□□□ -0.33
GABPB1-203ENST00000380877 TTI1O43156 1089 aa12.96□□□□□ -0.33
GABPB1-203ENST00000380877 ADORA2AP29274 412 aa12.96□□□□□ -0.33
GABPB1-203ENST00000380877 PPIL2Q13356 520 aa12.96□□□□□ -0.33
GABPB1-203ENST00000380877 PIGHQ14442 188 aaPredicted RBP12.96□□□□□ -0.33
GABPB1-203ENST00000380877 EP400NLQ6ZTU2 488 aa12.96□□□□□ -0.33
GABPB1-203ENST00000380877 ATL2Q8NHH9 583 aa12.96□□□□□ -0.33
GABPB1-203ENST00000380877 TPCN2Q8NHX9 752 aa12.96□□□□□ -0.33
GABPB1-203ENST00000380877 CGRRF1Q99675 332 aa12.96□□□□□ -0.33
GABPB1-203ENST00000380877 L2HGDHQ9H9P8 463 aa12.96□□□□□ -0.33
GABPB1-203ENST00000380877 A0A087WZ62 844 aa12.96□□□□□ -0.33
GABPB1-203ENST00000380877 C17orf102A2RUQ5 167 aa12.96□□□□□ -0.33
GABPB1-203ENST00000380877 SUN1O94901 812 aa12.96□□□□□ -0.33
GABPB1-203ENST00000380877 KRT17Q04695 432 aa12.96□□□□□ -0.33
GABPB1-203ENST00000380877 KCNA1Q09470 495 aa12.96□□□□□ -0.33
GABPB1-203ENST00000380877 KLRG1Q96E93 195 aa12.96□□□□□ -0.33
GABPB1-203ENST00000380877 FDXACB1Q9BRP7 624 aaPredicted RBP12.96□□□□□ -0.33
GABPB1-203ENST00000380877 RRAGCQ9HB90 399 aa12.96□□□□□ -0.33
GABPB1-203ENST00000380877 SLC38A7Q9NVC3 462 aa12.96□□□□□ -0.33
GABPB1-203ENST00000380877 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.96□□□□□ -0.33
GABPB1-203ENST00000380877 ADAM21Q9UKJ8 722 aa12.96□□□□□ -0.33
GABPB1-203ENST00000380877 PLA2G6O60733 806 aa12.96□□□□□ -0.33
GABPB1-203ENST00000380877 TBX2Q13207 712 aaPredicted RBP12.96□□□□□ -0.33
GABPB1-203ENST00000380877 DCAF4L1Q3SXM0 396 aa12.96□□□□□ -0.33
GABPB1-203ENST00000380877 GLRA4Q5JXX5 417 aa12.96□□□□□ -0.33
GABPB1-203ENST00000380877 HEATR6Q6AI08 1181 aaKnown RBP12.96□□□□□ -0.33
GABPB1-203ENST00000380877 ZNF571Q7Z3V5 609 aaPredicted RBP12.96□□□□□ -0.33
GABPB1-203ENST00000380877 ZC3H18Q86VM9 953 aaKnown RBP12.96□□□□□ -0.33
GABPB1-203ENST00000380877 RCOR2Q8IZ40 523 aa12.96□□□□□ -0.33
GABPB1-203ENST00000380877 GLT1D1Q96MS3 346 aa12.96□□□□□ -0.33
GABPB1-203ENST00000380877 PACSIN1Q9BY11 444 aa12.96□□□□□ -0.33
GABPB1-203ENST00000380877 CSDE1O75534 798 aaKnown RBP12.96□□□□□ -0.34
GABPB1-203ENST00000380877 CYP11B1P15538 503 aa12.96□□□□□ -0.34
GABPB1-203ENST00000380877 CASP5P51878 434 aa12.96□□□□□ -0.34
GABPB1-203ENST00000380877 TMEM132BQ14DG7 1078 aa12.96□□□□□ -0.34
GABPB1-203ENST00000380877 IZUMO3Q5VZ72 239 aa12.96□□□□□ -0.34
GABPB1-203ENST00000380877 ACAD10Q6JQN1 1059 aa12.96□□□□□ -0.34
GABPB1-203ENST00000380877 CCDC60Q8IWA6 550 aaPredicted RBP12.96□□□□□ -0.34
GABPB1-203ENST00000380877 ARHGAP24Q8N264 748 aa12.96□□□□□ -0.34
GABPB1-203ENST00000380877 SNF8Q96H20 258 aa12.96□□□□□ -0.34
GABPB1-203ENST00000380877 TRAPPC3O43617 180 aa12.95□□□□□ -0.34
GABPB1-203ENST00000380877 ZNF286BP0CG31 522 aa12.95□□□□□ -0.34
GABPB1-203ENST00000380877 CPB1P15086 417 aa12.95□□□□□ -0.34
GABPB1-203ENST00000380877 UBA1P22314 1058 aaKnown RBP12.95□□□□□ -0.34
GABPB1-203ENST00000380877 RASSF2P50749 326 aa12.95□□□□□ -0.34
GABPB1-203ENST00000380877 ROR1Q01973 937 aa12.95□□□□□ -0.34
GABPB1-203ENST00000380877 KIAA1755Q5JYT7 1200 aa12.95□□□□□ -0.34
GABPB1-203ENST00000380877 LRRC31Q6UY01 552 aa12.95□□□□□ -0.34
GABPB1-203ENST00000380877 CCDC197Q8NCU1 140 aa12.95□□□□□ -0.34
GABPB1-203ENST00000380877 SMYD2Q9NRG4 433 aa12.95□□□□□ -0.34
GABPB1-203ENST00000380877 FBXL5Q9UKA1 691 aa12.95□□□□□ -0.34
GABPB1-203ENST00000380877 UBQLN1Q9UMX0 589 aaKnown RBP12.95□□□□□ -0.34
GABPB1-203ENST00000380877 MORC2Q9Y6X9 1032 aaPredicted RBP12.95□□□□□ -0.34
GABPB1-203ENST00000380877 GRAP2O75791 330 aa12.95□□□□□ -0.34
GABPB1-203ENST00000380877 SEPT6Q14141 434 aa12.95□□□□□ -0.34
GABPB1-203ENST00000380877 C1orf131Q8NDD1 294 aaKnown RBP12.95□□□□□ -0.34
GABPB1-203ENST00000380877 NKX2-3Q8TAU0 364 aa12.95□□□□□ -0.34
GABPB1-203ENST00000380877 SIK2Q9H0K1 926 aa12.95□□□□□ -0.34
GABPB1-203ENST00000380877 ABHD16BQ9H3Z7 469 aa12.95□□□□□ -0.34
GABPB1-203ENST00000380877 VTA1Q9NP79 307 aa12.95□□□□□ -0.34
GABPB1-203ENST00000380877 KBTBD13C9JR72 458 aa12.95□□□□□ -0.34
GABPB1-203ENST00000380877 MMEP08473 750 aa12.95□□□□□ -0.34
GABPB1-203ENST00000380877 C1orf228Q6PIY5 440 aa12.95□□□□□ -0.34
GABPB1-203ENST00000380877 GLB1LQ6UWU2 654 aa12.95□□□□□ -0.34
GABPB1-203ENST00000380877 MOB2Q70IA6 237 aa12.95□□□□□ -0.34
GABPB1-203ENST00000380877 REPS2Q8NFH8 660 aa12.95□□□□□ -0.34
GABPB1-203ENST00000380877 PPM1EQ8WY54 764 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms