RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 TCHPQ9BT92 498 aa15.27■□□□□ 0.04
CLCN4-201ENST00000380829 ISCUQ9H1K1 167 aa15.27■□□□□ 0.04
CLCN4-201ENST00000380829 DDX20Q9UHI6 824 aaKnown RBP15.27■□□□□ 0.04
CLCN4-201ENST00000380829 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.27■□□□□ 0.04
CLCN4-201ENST00000380829 VNN1O95497 513 aa15.27■□□□□ 0.03
CLCN4-201ENST00000380829 KRT14P02533 472 aa15.27■□□□□ 0.03
CLCN4-201ENST00000380829 ZBTB48P10074 688 aaPredicted RBP15.27■□□□□ 0.03
CLCN4-201ENST00000380829 CLCN3P51790 818 aa15.27■□□□□ 0.03
CLCN4-201ENST00000380829 IGBP1P78318 339 aa15.27■□□□□ 0.03
CLCN4-201ENST00000380829 ENPEPQ07075 957 aa15.27■□□□□ 0.03
CLCN4-201ENST00000380829 SCARA3Q6AZY7 606 aa15.27■□□□□ 0.03
CLCN4-201ENST00000380829 USP38Q8NB14 1042 aa15.27■□□□□ 0.03
CLCN4-201ENST00000380829 NLRP4Q96MN2 994 aa15.27■□□□□ 0.03
CLCN4-201ENST00000380829 RNPEPQ9H4A4 650 aa15.27■□□□□ 0.03
CLCN4-201ENST00000380829 SMARCAD1Q9H4L7 1026 aa15.27■□□□□ 0.03
CLCN4-201ENST00000380829 SLC40A1Q9NP59 571 aa15.27■□□□□ 0.03
CLCN4-201ENST00000380829 CTTNBP2NLQ9P2B4 639 aa15.27■□□□□ 0.03
CLCN4-201ENST00000380829 SUCLA2Q9P2R7 463 aaPredicted RBP15.27■□□□□ 0.03
CLCN4-201ENST00000380829 AMFRQ9UKV5 643 aa15.27■□□□□ 0.03
CLCN4-201ENST00000380829 IGKV6-21A0A0C4DH24 114 aa15.26■□□□□ 0.03
CLCN4-201ENST00000380829 LDHAP00338 332 aaKnown RBP15.26■□□□□ 0.03
CLCN4-201ENST00000380829 GTF2A2P52657 109 aa15.26■□□□□ 0.03
CLCN4-201ENST00000380829 SEC24CP53992 1094 aa15.26■□□□□ 0.03
CLCN4-201ENST00000380829 GCNT1Q02742 428 aa15.26■□□□□ 0.03
CLCN4-201ENST00000380829 E2F5Q15329 346 aa15.26■□□□□ 0.03
CLCN4-201ENST00000380829 ZNF792Q3KQV3 632 aa15.26■□□□□ 0.03
CLCN4-201ENST00000380829 WDR44Q5JSH3 913 aa15.26■□□□□ 0.03
CLCN4-201ENST00000380829 OR5B17Q8NGF7 314 aa15.26■□□□□ 0.03
CLCN4-201ENST00000380829 TCP11Q8WWU5 503 aa15.26■□□□□ 0.03
CLCN4-201ENST00000380829 KRT12Q99456 494 aa15.26■□□□□ 0.03
CLCN4-201ENST00000380829 CCDC113Q9H0I3 377 aa15.26■□□□□ 0.03
CLCN4-201ENST00000380829 CNTNAP2Q9UHC6 1331 aa15.26■□□□□ 0.03
CLCN4-201ENST00000380829 RTN2O75298 545 aa15.26■□□□□ 0.03
CLCN4-201ENST00000380829 RASSF9O75901 435 aa15.26■□□□□ 0.03
CLCN4-201ENST00000380829 PRKCBP05771 671 aa15.26■□□□□ 0.03
CLCN4-201ENST00000380829 EFNA5P52803 228 aa15.26■□□□□ 0.03
CLCN4-201ENST00000380829 SKOR1P84550 965 aa15.26■□□□□ 0.03
CLCN4-201ENST00000380829 ARHGAP1Q07960 439 aa15.26■□□□□ 0.03
CLCN4-201ENST00000380829 IFT88Q13099 833 aa15.26■□□□□ 0.03
CLCN4-201ENST00000380829 MXD4Q14582 209 aaPredicted RBP15.26■□□□□ 0.03
CLCN4-201ENST00000380829 WLSQ5T9L3 541 aa15.26■□□□□ 0.03
CLCN4-201ENST00000380829 CDCA2Q69YH5 1023 aaPredicted RBP15.26■□□□□ 0.03
CLCN4-201ENST00000380829 TAPT1Q6NXT6 567 aa15.26■□□□□ 0.03
CLCN4-201ENST00000380829 ZNF473Q8WTR7 871 aaKnown RBP15.26■□□□□ 0.03
CLCN4-201ENST00000380829 HES6Q96HZ4 224 aa15.26■□□□□ 0.03
CLCN4-201ENST00000380829 PBKQ96KB5 322 aa15.26■□□□□ 0.03
CLCN4-201ENST00000380829 RNPC3Q96LT9 517 aaKnown RBP15.26■□□□□ 0.03
CLCN4-201ENST00000380829 RUFY1Q96T51 708 aa15.26■□□□□ 0.03
CLCN4-201ENST00000380829 MRPL4Q9BYD3 311 aaKnown RBP15.26■□□□□ 0.03
CLCN4-201ENST00000380829 STIM2Q9P246 746 aa15.26■□□□□ 0.03
CLCN4-201ENST00000380829 PPME1Q9Y570 386 aa15.26■□□□□ 0.03
CLCN4-201ENST00000380829 ZC3H11AO75152 810 aaKnown RBP eCLIP15.25■□□□□ 0.03
CLCN4-201ENST00000380829 LSP1P33241 339 aa15.25■□□□□ 0.03
CLCN4-201ENST00000380829 GPC5P78333 572 aa15.25■□□□□ 0.03
CLCN4-201ENST00000380829 CDR2Q01850 454 aa15.25■□□□□ 0.03
CLCN4-201ENST00000380829 BIRC2Q13490 618 aa15.25■□□□□ 0.03
CLCN4-201ENST00000380829 MAPK6Q16659 721 aa15.25■□□□□ 0.03
CLCN4-201ENST00000380829 SPRED3Q2MJR0 410 aa15.25■□□□□ 0.03
CLCN4-201ENST00000380829 EFCAB12Q6NXP0 572 aa15.25■□□□□ 0.03
CLCN4-201ENST00000380829 ZBTB8OSQ8IWT0 167 aa15.25■□□□□ 0.03
CLCN4-201ENST00000380829 KLHL7Q8IXQ5 586 aa15.25■□□□□ 0.03
CLCN4-201ENST00000380829 GTF3C2Q8WUA4 911 aaPredicted RBP15.25■□□□□ 0.03
CLCN4-201ENST00000380829 DDX1Q92499 740 aaKnown RBP15.25■□□□□ 0.03
CLCN4-201ENST00000380829 SCLT1Q96NL6 688 aa15.25■□□□□ 0.03
CLCN4-201ENST00000380829 CGRRF1Q99675 332 aa15.25■□□□□ 0.03
CLCN4-201ENST00000380829 APOBEC3GQ9HC16 384 aaKnown RBP15.25■□□□□ 0.03
CLCN4-201ENST00000380829 DIS3Q9Y2L1 958 aaKnown RBP15.25■□□□□ 0.03
CLCN4-201ENST00000380829 CES2O00748 559 aa15.25■□□□□ 0.03
CLCN4-201ENST00000380829 TOM1L1O75674 476 aa15.25■□□□□ 0.03
CLCN4-201ENST00000380829 CLNS1AP54105 237 aaKnown RBP15.25■□□□□ 0.03
CLCN4-201ENST00000380829 ZPBP2Q6X784 338 aa15.25■□□□□ 0.03
CLCN4-201ENST00000380829 FAM228AQ86W67 206 aa15.25■□□□□ 0.03
CLCN4-201ENST00000380829 CDR2LQ86X02 465 aaPredicted RBP15.25■□□□□ 0.03
CLCN4-201ENST00000380829 RHOT2Q8IXI1 618 aa15.25■□□□□ 0.03
CLCN4-201ENST00000380829 PPP1R16BQ96T49 567 aa15.25■□□□□ 0.03
CLCN4-201ENST00000380829 ACO2Q99798 780 aaKnown RBP15.25■□□□□ 0.03
CLCN4-201ENST00000380829 AP1M1Q9BXS5 423 aa15.25■□□□□ 0.03
CLCN4-201ENST00000380829 GBA2Q9HCG7 927 aaPredicted RBP15.25■□□□□ 0.03
CLCN4-201ENST00000380829 NOC2LQ9Y3T9 749 aaKnown RBP15.25■□□□□ 0.03
CLCN4-201ENST00000380829 IVNS1ABPQ9Y6Y0 642 aa15.25■□□□□ 0.03
CLCN4-201ENST00000380829 ZSCAN5CA6NGD5 496 aaPredicted RBP15.24■□□□□ 0.03
CLCN4-201ENST00000380829 TMEM110-MUSTN1A8MSY1 372 aa15.24■□□□□ 0.03
CLCN4-201ENST00000380829 GAS2O43903 313 aaKnown RBP15.24■□□□□ 0.03
CLCN4-201ENST00000380829 FAM189A1O60320 539 aa15.24■□□□□ 0.03
CLCN4-201ENST00000380829 HBP1O60381 514 aa15.24■□□□□ 0.03
CLCN4-201ENST00000380829 GZMAP12544 262 aa15.24■□□□□ 0.03
CLCN4-201ENST00000380829 ADCYAP1R1P41586 468 aa15.24■□□□□ 0.03
CLCN4-201ENST00000380829 ENOSF1Q7L5Y1 443 aa15.24■□□□□ 0.03
CLCN4-201ENST00000380829 ACTRT1Q8TDG2 376 aa15.24■□□□□ 0.03
CLCN4-201ENST00000380829 ZIM3Q96PE6 472 aa15.24■□□□□ 0.03
CLCN4-201ENST00000380829 ERAP1Q9NZ08 941 aa15.24■□□□□ 0.03
CLCN4-201ENST00000380829 UMODL1Q5DID0 1318 aa15.24■□□□□ 0.03
CLCN4-201ENST00000380829 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.24■□□□□ 0.03
CLCN4-201ENST00000380829 ESYT3A0FGR9 886 aa15.24■□□□□ 0.03
CLCN4-201ENST00000380829 INO80B-WBP1J3KQ70 363 aa15.24■□□□□ 0.03
CLCN4-201ENST00000380829 PGRMC1O00264 195 aaKnown RBP15.24■□□□□ 0.03
CLCN4-201ENST00000380829 B4GALT5O43286 388 aa15.24■□□□□ 0.03
CLCN4-201ENST00000380829 OPA1O60313 960 aa15.24■□□□□ 0.03
CLCN4-201ENST00000380829 LGALS2P05162 132 aa15.24■□□□□ 0.03
CLCN4-201ENST00000380829 GLI1P08151 1106 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms