RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 OR6P1Q8NGX9 317 aa7.55□□□□□ -1.2
CCDC171-201ENST00000380701 PHF20Q9BVI0 1012 aa7.55□□□□□ -1.2
CCDC171-201ENST00000380701 SPHKAPQ2M3C7 1700 aa7.55□□□□□ -1.2
CCDC171-201ENST00000380701 ALDH1A2O94788 518 aa7.55□□□□□ -1.2
CCDC171-201ENST00000380701 CDH2P19022 906 aaPredicted RBP7.55□□□□□ -1.2
CCDC171-201ENST00000380701 HDAC4P56524 1084 aa7.55□□□□□ -1.2
CCDC171-201ENST00000380701 HIST2H2ACQ16777 129 aaPredicted RBP7.55□□□□□ -1.2
CCDC171-201ENST00000380701 HIST2H2AA3Q6FI13 130 aa7.55□□□□□ -1.2
CCDC171-201ENST00000380701 NAPEPLDQ6IQ20 393 aa7.55□□□□□ -1.2
CCDC171-201ENST00000380701 MMS22LQ6ZRQ5 1243 aa7.55□□□□□ -1.2
CCDC171-201ENST00000380701 PID1Q7Z2X4 250 aa7.55□□□□□ -1.2
CCDC171-201ENST00000380701 ATL2Q8NHH9 583 aa7.55□□□□□ -1.2
CCDC171-201ENST00000380701 CYTH2Q99418 400 aa7.55□□□□□ -1.2
CCDC171-201ENST00000380701 ZNF518BQ9C0D4 1074 aa7.55□□□□□ -1.2
CCDC171-201ENST00000380701 CYP3A43Q9HB55 503 aa7.55□□□□□ -1.2
CCDC171-201ENST00000380701 APEX2Q9UBZ4 518 aa7.55□□□□□ -1.2
CCDC171-201ENST00000380701 INTUQ9ULD6 942 aa7.55□□□□□ -1.2
CCDC171-201ENST00000380701 HEY1Q9Y5J3 304 aa7.55□□□□□ -1.2
CCDC171-201ENST00000380701 SALL1Q9NSC2 1324 aa7.55□□□□□ -1.2
CCDC171-201ENST00000380701 DYRK3O43781 588 aa7.55□□□□□ -1.2
CCDC171-201ENST00000380701 ASMTLO95671 621 aa7.55□□□□□ -1.2
CCDC171-201ENST00000380701 MOCS2O96007 188 aaPredicted RBP7.55□□□□□ -1.2
CCDC171-201ENST00000380701 RASA1P20936 1047 aa7.55□□□□□ -1.2
CCDC171-201ENST00000380701 SNAP25P60880 206 aa7.55□□□□□ -1.2
CCDC171-201ENST00000380701 PHKG1Q16816 387 aa7.55□□□□□ -1.2
CCDC171-201ENST00000380701 E4F1Q66K89 784 aaPredicted RBP7.55□□□□□ -1.2
CCDC171-201ENST00000380701 GPC2Q8N158 579 aa7.55□□□□□ -1.2
CCDC171-201ENST00000380701 CDC26Q8NHZ8 85 aa7.55□□□□□ -1.2
CCDC171-201ENST00000380701 PRPF18Q99633 342 aaKnown RBP7.55□□□□□ -1.2
CCDC171-201ENST00000380701 PAK5Q9P286 719 aa7.55□□□□□ -1.2
CCDC171-201ENST00000380701 CDC42BPBQ9Y5S2 1711 aa7.55□□□□□ -1.2
CCDC171-201ENST00000380701 FTLP02792 175 aaPredicted RBP7.54□□□□□ -1.2
CCDC171-201ENST00000380701 NAMPTP43490 491 aa7.54□□□□□ -1.2
CCDC171-201ENST00000380701 LHX1P48742 406 aa7.54□□□□□ -1.2
CCDC171-201ENST00000380701 AARSP49588 968 aaKnown RBP eCLIP7.54□□□□□ -1.2
CCDC171-201ENST00000380701 LBRQ14739 615 aaKnown RBP7.54□□□□□ -1.2
CCDC171-201ENST00000380701 SMYD4Q8IYR2 804 aaPredicted RBP7.54□□□□□ -1.2
CCDC171-201ENST00000380701 SYT2Q8N9I0 419 aaPredicted RBP7.54□□□□□ -1.2
CCDC171-201ENST00000380701 ENGASEQ8NFI3 743 aa7.54□□□□□ -1.2
CCDC171-201ENST00000380701 MTG1Q9BT17 334 aaPredicted RBP7.54□□□□□ -1.2
CCDC171-201ENST00000380701 SEZ6LQ9BYH1 1024 aa7.54□□□□□ -1.2
CCDC171-201ENST00000380701 HACD3Q9P035 362 aa7.54□□□□□ -1.2
CCDC171-201ENST00000380701 STK39Q9UEW8 545 aa7.54□□□□□ -1.2
CCDC171-201ENST00000380701 MAGED2Q9UNF1 606 aaPredicted RBP7.54□□□□□ -1.2
CCDC171-201ENST00000380701 POLD3Q15054 466 aaPredicted RBP7.54□□□□□ -1.2
CCDC171-201ENST00000380701 ZNF394Q53GI3 561 aa7.54□□□□□ -1.2
CCDC171-201ENST00000380701 KHDRBS2Q5VWX1 349 aaKnown RBP7.54□□□□□ -1.2
CCDC171-201ENST00000380701 KRT80Q6KB66 452 aa7.54□□□□□ -1.2
CCDC171-201ENST00000380701 NIPA1Q7RTP0 329 aa7.54□□□□□ -1.2
CCDC171-201ENST00000380701 TAB3Q8N5C8 712 aaPredicted RBP7.54□□□□□ -1.2
CCDC171-201ENST00000380701 VPS37AQ8NEZ2 397 aa7.54□□□□□ -1.2
CCDC171-201ENST00000380701 NKX2-3Q8TAU0 364 aa7.54□□□□□ -1.2
CCDC171-201ENST00000380701 RNF217Q8TC41 542 aa7.54□□□□□ -1.2
CCDC171-201ENST00000380701 SLC20A1Q8WUM9 679 aa7.54□□□□□ -1.2
CCDC171-201ENST00000380701 SYN2Q92777 582 aaPredicted RBP7.54□□□□□ -1.2
CCDC171-201ENST00000380701 NCLNQ969V3 563 aa7.54□□□□□ -1.2
CCDC171-201ENST00000380701 DACT3Q96B18 629 aaPredicted RBP7.54□□□□□ -1.2
CCDC171-201ENST00000380701 TSEN34Q9BSV6 310 aaKnown RBP7.54□□□□□ -1.2
CCDC171-201ENST00000380701 ABHD10Q9NUJ1 306 aa7.54□□□□□ -1.2
CCDC171-201ENST00000380701 TRPM5Q9NZQ8 1165 aa7.54□□□□□ -1.2
CCDC171-201ENST00000380701 OPHN1O60890 802 aa7.54□□□□□ -1.2
CCDC171-201ENST00000380701 TDP2O95551 362 aa7.54□□□□□ -1.2
CCDC171-201ENST00000380701 PDHBP11177 359 aa7.54□□□□□ -1.2
CCDC171-201ENST00000380701 EPHB3P54753 998 aa7.54□□□□□ -1.2
CCDC171-201ENST00000380701 NSUN2Q08J23 767 aaKnown RBP eCLIP7.54□□□□□ -1.2
CCDC171-201ENST00000380701 SLC12A1Q13621 1099 aa7.54□□□□□ -1.2
CCDC171-201ENST00000380701 TIGD7Q6NT04 549 aaPredicted RBP7.54□□□□□ -1.2
CCDC171-201ENST00000380701 TRPC7Q9HCX4 862 aa7.54□□□□□ -1.2
CCDC171-201ENST00000380701 LRRC53A6NM62 1247 aa7.54□□□□□ -1.2
CCDC171-201ENST00000380701 SFI1A8K8P3 1242 aa7.54□□□□□ -1.2
CCDC171-201ENST00000380701 OGTO15294 1046 aa7.54□□□□□ -1.2
CCDC171-201ENST00000380701 XYLBO75191 536 aa7.54□□□□□ -1.2
CCDC171-201ENST00000380701 NME3Q13232 169 aa7.54□□□□□ -1.2
CCDC171-201ENST00000380701 RCN2Q14257 317 aa7.54□□□□□ -1.2
CCDC171-201ENST00000380701 EFCAB12Q6NXP0 572 aa7.54□□□□□ -1.2
CCDC171-201ENST00000380701 TRIM9Q9C026 710 aa7.54□□□□□ -1.2
CCDC171-201ENST00000380701 KRT82Q9NSB4 513 aa7.54□□□□□ -1.2
CCDC171-201ENST00000380701 UXTQ9UBK9 157 aaPredicted RBP7.54□□□□□ -1.2
CCDC171-201ENST00000380701 CFAP65Q6ZU64 1925 aaKnown RBP7.54□□□□□ -1.2
CCDC171-201ENST00000380701 NDUFS3O75489 264 aa7.54□□□□□ -1.2
CCDC171-201ENST00000380701 TOMM70O94826 608 aa7.54□□□□□ -1.2
CCDC171-201ENST00000380701 AMHP03971 560 aa7.54□□□□□ -1.2
CCDC171-201ENST00000380701 PDGFRAP16234 1089 aa7.54□□□□□ -1.2
CCDC171-201ENST00000380701 TGM3Q08188 693 aa7.54□□□□□ -1.2
CCDC171-201ENST00000380701 SNRNP35Q16560 246 aaKnown RBP7.54□□□□□ -1.2
CCDC171-201ENST00000380701 RASSF3Q86WH2 238 aa7.54□□□□□ -1.2
CCDC171-201ENST00000380701 HERC6Q8IVU3 1022 aa7.54□□□□□ -1.2
CCDC171-201ENST00000380701 HTATIP2Q9BUP3 242 aa7.54□□□□□ -1.2
CCDC171-201ENST00000380701 STARD7Q9NQZ5 370 aa7.54□□□□□ -1.2
CCDC171-201ENST00000380701 AIPL1Q9NZN9 384 aa7.54□□□□□ -1.2
CCDC171-201ENST00000380701 ZFATQ9P243 1243 aa7.54□□□□□ -1.2
CCDC171-201ENST00000380701 SMG5Q9UPR3 1016 aaKnown RBP7.54□□□□□ -1.2
CCDC171-201ENST00000380701 EEF2KO00418 725 aaKnown RBP7.53□□□□□ -1.2
CCDC171-201ENST00000380701 H2AFYO75367 372 aaKnown RBP7.53□□□□□ -1.2
CCDC171-201ENST00000380701 KRT14P02533 472 aa7.53□□□□□ -1.2
CCDC171-201ENST00000380701 MAPTP10636 758 aaKnown RBP7.53□□□□□ -1.2
CCDC171-201ENST00000380701 AKR1A1P14550 325 aa7.53□□□□□ -1.2
CCDC171-201ENST00000380701 CDC25AP30304 524 aa7.53□□□□□ -1.2
CCDC171-201ENST00000380701 OR1G1P47890 313 aa7.53□□□□□ -1.2
CCDC171-201ENST00000380701 ANGPTL8Q6UXH0 198 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms