RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 RNPC3Q96LT9 517 aaKnown RBP11.22□□□□□ -0.61
POLR2J3-201ENST00000379340 SPATA33Q96N06 139 aa11.22□□□□□ -0.61
POLR2J3-201ENST00000379340 ZSWIM1Q9BR11 485 aa11.22□□□□□ -0.61
POLR2J3-201ENST00000379340 TMEM106CQ9BVX2 250 aa11.22□□□□□ -0.61
POLR2J3-201ENST00000379340 IMPG2Q9BZV3 1241 aa11.22□□□□□ -0.61
POLR2J3-201ENST00000379340 AVENQ9NQS1 362 aaPredicted RBP11.22□□□□□ -0.61
POLR2J3-201ENST00000379340 ANKFY1Q9P2R3 1169 aa11.22□□□□□ -0.61
POLR2J3-201ENST00000379340 PLXNA1Q9UIW2 1896 aa11.22□□□□□ -0.61
POLR2J3-201ENST00000379340 CNTNAP2Q9UHC6 1331 aa11.22□□□□□ -0.61
POLR2J3-201ENST00000379340 PLXNB2O15031 1838 aa11.22□□□□□ -0.61
POLR2J3-201ENST00000379340 TULP1O00294 542 aaPredicted RBP11.21□□□□□ -0.61
POLR2J3-201ENST00000379340 OGTO15294 1046 aa11.21□□□□□ -0.61
POLR2J3-201ENST00000379340 SART1O43290 800 aaKnown RBP11.21□□□□□ -0.61
POLR2J3-201ENST00000379340 MSCO60682 206 aa11.21□□□□□ -0.61
POLR2J3-201ENST00000379340 HSF2BPO75031 334 aa11.21□□□□□ -0.61
POLR2J3-201ENST00000379340 FGGP02679 453 aa11.21□□□□□ -0.61
POLR2J3-201ENST00000379340 PRKCBP05771 671 aa11.21□□□□□ -0.61
POLR2J3-201ENST00000379340 RNASE9P60153 205 aaKnown RBP11.21□□□□□ -0.61
POLR2J3-201ENST00000379340 LAMTOR4Q0VGL1 99 aa11.21□□□□□ -0.61
POLR2J3-201ENST00000379340 CUL2Q13617 745 aa11.21□□□□□ -0.61
POLR2J3-201ENST00000379340 MAPK6Q16659 721 aa11.21□□□□□ -0.61
POLR2J3-201ENST00000379340 ZNF484Q5JVG2 852 aa11.21□□□□□ -0.61
POLR2J3-201ENST00000379340 SEL1L2Q5TEA6 688 aa11.21□□□□□ -0.61
POLR2J3-201ENST00000379340 EEPD1Q7L9B9 569 aa11.21□□□□□ -0.61
POLR2J3-201ENST00000379340 EFCAB13Q8IY85 973 aa11.21□□□□□ -0.61
POLR2J3-201ENST00000379340 ABRAQ8N0Z2 381 aa11.21□□□□□ -0.61
POLR2J3-201ENST00000379340 SH3TC2Q8TF17 1288 aa11.21□□□□□ -0.61
POLR2J3-201ENST00000379340 CASKIN2Q8WXE0 1202 aa11.21□□□□□ -0.61
POLR2J3-201ENST00000379340 RUNDC3BQ96NL0 473 aa11.21□□□□□ -0.61
POLR2J3-201ENST00000379340 RUFY1Q96T51 708 aa11.21□□□□□ -0.61
POLR2J3-201ENST00000379340 ACO2Q99798 780 aaKnown RBP11.21□□□□□ -0.61
POLR2J3-201ENST00000379340 NUP85Q9BW27 656 aa11.21□□□□□ -0.61
POLR2J3-201ENST00000379340 PLVAPQ9BX97 442 aa11.21□□□□□ -0.61
POLR2J3-201ENST00000379340 HAPLN2Q9GZV7 340 aa11.21□□□□□ -0.61
POLR2J3-201ENST00000379340 VTA1Q9NP79 307 aa11.21□□□□□ -0.61
POLR2J3-201ENST00000379340 FAM114A2Q9NRY5 505 aa11.21□□□□□ -0.61
POLR2J3-201ENST00000379340 CNTN6Q9UQ52 1028 aa11.21□□□□□ -0.61
POLR2J3-201ENST00000379340 FAM187AA6NFU0 413 aa11.2□□□□□ -0.62
POLR2J3-201ENST00000379340 GOLGA8KD6RF30 607 aa11.2□□□□□ -0.62
POLR2J3-201ENST00000379340 PHACTR2O75167 634 aa11.2□□□□□ -0.62
POLR2J3-201ENST00000379340 VNN1O95497 513 aa11.2□□□□□ -0.62
POLR2J3-201ENST00000379340 SYF2O95926 243 aaKnown RBP11.2□□□□□ -0.62
POLR2J3-201ENST00000379340 CLTAP09496 248 aa11.2□□□□□ -0.62
POLR2J3-201ENST00000379340 TXNP10599 105 aaKnown RBP11.2□□□□□ -0.62
POLR2J3-201ENST00000379340 CETPP11597 493 aa11.2□□□□□ -0.62
POLR2J3-201ENST00000379340 UNGP13051 313 aaPredicted RBP11.2□□□□□ -0.62
POLR2J3-201ENST00000379340 CYP2C19P33261 490 aa11.2□□□□□ -0.62
POLR2J3-201ENST00000379340 CTNNA1P35221 906 aaKnown RBP11.2□□□□□ -0.62
POLR2J3-201ENST00000379340 CARSP49589 748 aaKnown RBP11.2□□□□□ -0.62
POLR2J3-201ENST00000379340 PTENP60484 403 aa11.2□□□□□ -0.62
POLR2J3-201ENST00000379340 CENPCQ03188 943 aa11.2□□□□□ -0.62
POLR2J3-201ENST00000379340 POU5F1BQ06416 359 aa11.2□□□□□ -0.62
POLR2J3-201ENST00000379340 MCL1Q07820 350 aa11.2□□□□□ -0.62
POLR2J3-201ENST00000379340 LAMC2Q13753 1193 aa11.2□□□□□ -0.62
POLR2J3-201ENST00000379340 DHX34Q14147 1143 aaKnown RBP11.2□□□□□ -0.62
POLR2J3-201ENST00000379340 HSDL1Q3SXM5 330 aa11.2□□□□□ -0.62
POLR2J3-201ENST00000379340 ZNF467Q7Z7K2 595 aaPredicted RBP11.2□□□□□ -0.62
POLR2J3-201ENST00000379340 FBXO16Q8IX29 292 aaPredicted RBP11.2□□□□□ -0.62
POLR2J3-201ENST00000379340 GPRC5AQ8NFJ5 357 aa11.2□□□□□ -0.62
POLR2J3-201ENST00000379340 CD101Q93033 1021 aa11.2□□□□□ -0.62
POLR2J3-201ENST00000379340 VCPIP1Q96JH7 1222 aa11.2□□□□□ -0.62
POLR2J3-201ENST00000379340 ZBTB45Q96K62 511 aaPredicted RBP11.2□□□□□ -0.62
POLR2J3-201ENST00000379340 PI4K2AQ9BTU6 479 aa11.2□□□□□ -0.62
POLR2J3-201ENST00000379340 NFKBIZQ9BYH8 718 aa11.2□□□□□ -0.62
POLR2J3-201ENST00000379340 ARHGAP39Q9C0H5 1083 aa11.2□□□□□ -0.62
POLR2J3-201ENST00000379340 RAB17Q9H0T7 212 aa11.2□□□□□ -0.62
POLR2J3-201ENST00000379340 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.2□□□□□ -0.62
POLR2J3-201ENST00000379340 VPS18Q9P253 973 aa11.2□□□□□ -0.62
POLR2J3-201ENST00000379340 ADAM21Q9UKJ8 722 aa11.2□□□□□ -0.62
POLR2J3-201ENST00000379340 NFU1Q9UMS0 254 aa11.2□□□□□ -0.62
POLR2J3-201ENST00000379340 TRPC6Q9Y210 931 aa11.2□□□□□ -0.62
POLR2J3-201ENST00000379340 FAN1Q9Y2M0 1017 aa11.2□□□□□ -0.62
POLR2J3-201ENST00000379340 COL1A2P08123 1366 aa11.2□□□□□ -0.62
POLR2J3-201ENST00000379340 RBM47A0AV96 593 aaKnown RBP11.2□□□□□ -0.62
POLR2J3-201ENST00000379340 ZBTB42B2RXF5 422 aa11.2□□□□□ -0.62
POLR2J3-201ENST00000379340 ACKR2O00590 384 aa11.2□□□□□ -0.62
POLR2J3-201ENST00000379340 STRNO43815 780 aa11.2□□□□□ -0.62
POLR2J3-201ENST00000379340 RNF40O75150 1001 aa11.2□□□□□ -0.62
POLR2J3-201ENST00000379340 CYP1A1P04798 512 aaPredicted RBP11.2□□□□□ -0.62
POLR2J3-201ENST00000379340 ACO1P21399 889 aaKnown RBP11.2□□□□□ -0.62
POLR2J3-201ENST00000379340 COMTP21964 271 aa11.2□□□□□ -0.62
POLR2J3-201ENST00000379340 SLC1A1P43005 524 aa11.2□□□□□ -0.62
POLR2J3-201ENST00000379340 NSFP46459 744 aaKnown RBP11.2□□□□□ -0.62
POLR2J3-201ENST00000379340 GCLCP48506 637 aaPredicted RBP11.2□□□□□ -0.62
POLR2J3-201ENST00000379340 GTF2A2P52657 109 aa11.2□□□□□ -0.62
POLR2J3-201ENST00000379340 NOP14P78316 857 aaKnown RBP11.2□□□□□ -0.62
POLR2J3-201ENST00000379340 POU5F1Q01860 360 aaKnown RBP11.2□□□□□ -0.62
POLR2J3-201ENST00000379340 PPFIA1Q13136 1202 aa11.2□□□□□ -0.62
POLR2J3-201ENST00000379340 NCOA4Q13772 614 aa11.2□□□□□ -0.62
POLR2J3-201ENST00000379340 LIN9Q5TKA1 542 aa11.2□□□□□ -0.62
POLR2J3-201ENST00000379340 WDR78Q5VTH9 848 aa11.2□□□□□ -0.62
POLR2J3-201ENST00000379340 DCAF12L1Q5VU92 463 aa11.2□□□□□ -0.62
POLR2J3-201ENST00000379340 LMBRD2Q68DH5 695 aaPredicted RBP11.2□□□□□ -0.62
POLR2J3-201ENST00000379340 MPZL3Q6UWV2 235 aa11.2□□□□□ -0.62
POLR2J3-201ENST00000379340 ARMCX2Q7L311 632 aa11.2□□□□□ -0.62
POLR2J3-201ENST00000379340 MCOLN2Q8IZK6 566 aa11.2□□□□□ -0.62
POLR2J3-201ENST00000379340 RNF149Q8NC42 400 aa11.2□□□□□ -0.62
POLR2J3-201ENST00000379340 SEC14L1Q92503 715 aa11.2□□□□□ -0.62
POLR2J3-201ENST00000379340 EMID1Q96A84 441 aaPredicted RBP11.2□□□□□ -0.62
POLR2J3-201ENST00000379340 LRRC45Q96CN5 670 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms