RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 CEP120Q8N960 986 aa19.54■□□□□ 0.72
PDLIM4-202ENST00000379018 ERMNQ8TAM6 284 aa19.54■□□□□ 0.72
PDLIM4-202ENST00000379018 ELSPBP1Q96BH3 223 aa19.54■□□□□ 0.72
PDLIM4-202ENST00000379018 UROC1Q96N76 676 aa19.54■□□□□ 0.72
PDLIM4-202ENST00000379018 ZFP14Q9HCL3 533 aa19.54■□□□□ 0.72
PDLIM4-202ENST00000379018 RAB23Q9ULC3 237 aa19.54■□□□□ 0.72
PDLIM4-202ENST00000379018 TICRRQ7Z2Z1 1910 aa19.54■□□□□ 0.72
PDLIM4-202ENST00000379018 PODXLO00592 558 aa19.53■□□□□ 0.72
PDLIM4-202ENST00000379018 NRG2O14511 850 aaPredicted RBP19.53■□□□□ 0.72
PDLIM4-202ENST00000379018 LILRB5O75023 590 aa19.53■□□□□ 0.72
PDLIM4-202ENST00000379018 HARSP12081 509 aaKnown RBP19.53■□□□□ 0.72
PDLIM4-202ENST00000379018 SDHBP21912 280 aa19.53■□□□□ 0.72
PDLIM4-202ENST00000379018 YARSP54577 528 aaKnown RBP19.53■□□□□ 0.72
PDLIM4-202ENST00000379018 SPEM2Q0P670 501 aa19.53■□□□□ 0.72
PDLIM4-202ENST00000379018 ME3Q16798 604 aa19.53■□□□□ 0.72
PDLIM4-202ENST00000379018 ZNF461Q8TAF7 563 aa19.53■□□□□ 0.72
PDLIM4-202ENST00000379018 POLR3CQ9BUI4 534 aaPredicted RBP19.53■□□□□ 0.72
PDLIM4-202ENST00000379018 TRMT61BQ9BVS5 477 aaKnown RBP19.53■□□□□ 0.72
PDLIM4-202ENST00000379018 PARD6AQ9NPB6 346 aa19.53■□□□□ 0.72
PDLIM4-202ENST00000379018 SMIM28A0A1B0GU29 152 aa19.52■□□□□ 0.72
PDLIM4-202ENST00000379018 SHISA7A6NL88 538 aa19.52■□□□□ 0.72
PDLIM4-202ENST00000379018 CCDC169A6NNP5 214 aa19.52■□□□□ 0.72
PDLIM4-202ENST00000379018 PRR5-ARHGAP8B1AHC4 643 aa19.52■□□□□ 0.72
PDLIM4-202ENST00000379018 SEC24AO95486 1093 aa19.52■□□□□ 0.72
PDLIM4-202ENST00000379018 GJA1P17302 382 aa19.52■□□□□ 0.72
PDLIM4-202ENST00000379018 KCNA4P22459 653 aa19.52■□□□□ 0.72
PDLIM4-202ENST00000379018 FCARP24071 287 aa19.52■□□□□ 0.72
PDLIM4-202ENST00000379018 GDI1P31150 447 aa19.52■□□□□ 0.72
PDLIM4-202ENST00000379018 ARHGAP8P85298 464 aa19.52■□□□□ 0.72
PDLIM4-202ENST00000379018 FZD5Q13467 585 aa19.52■□□□□ 0.72
PDLIM4-202ENST00000379018 ANKRD1Q15327 319 aa19.52■□□□□ 0.72
PDLIM4-202ENST00000379018 ZNF174Q15697 407 aa19.52■□□□□ 0.72
PDLIM4-202ENST00000379018 PRSS36Q5K4E3 855 aa19.52■□□□□ 0.72
PDLIM4-202ENST00000379018 APBB1IPQ7Z5R6 666 aaPredicted RBP19.52■□□□□ 0.72
PDLIM4-202ENST00000379018 HS6ST3Q8IZP7 471 aa19.52■□□□□ 0.72
PDLIM4-202ENST00000379018 NSUN7Q8NE18 718 aaKnown RBP19.52■□□□□ 0.72
PDLIM4-202ENST00000379018 DNASE1L2Q92874 299 aa19.52■□□□□ 0.72
PDLIM4-202ENST00000379018 GTF3C6Q969F1 213 aa19.52■□□□□ 0.72
PDLIM4-202ENST00000379018 BORCS6Q96GS4 357 aa19.52■□□□□ 0.72
PDLIM4-202ENST00000379018 CCDC94Q9BW85 323 aaPredicted RBP19.52■□□□□ 0.72
PDLIM4-202ENST00000379018 NUB1Q9Y5A7 615 aa19.52■□□□□ 0.72
PDLIM4-202ENST00000379018 INSL5Q9Y5Q6 135 aa19.52■□□□□ 0.72
PDLIM4-202ENST00000379018 EPG5Q9HCE0 2579 aa19.51■□□□□ 0.71
PDLIM4-202ENST00000379018 ARHGEF37A1IGU5 675 aa19.51■□□□□ 0.71
PDLIM4-202ENST00000379018 TBC1D4O60343 1298 aa19.51■□□□□ 0.71
PDLIM4-202ENST00000379018 MYL4P12829 197 aa19.51■□□□□ 0.71
PDLIM4-202ENST00000379018 CCT6AP40227 531 aaKnown RBP19.51■□□□□ 0.71
PDLIM4-202ENST00000379018 VIPR2P41587 438 aa19.51■□□□□ 0.71
PDLIM4-202ENST00000379018 CCR2P41597 374 aa19.51■□□□□ 0.71
PDLIM4-202ENST00000379018 ZNF568Q3ZCX4 644 aa19.51■□□□□ 0.71
PDLIM4-202ENST00000379018 RTL10Q7L3V2 364 aa19.51■□□□□ 0.71
PDLIM4-202ENST00000379018 ELMOD1Q8N336 334 aa19.51■□□□□ 0.71
PDLIM4-202ENST00000379018 FAM3CQ92520 227 aa19.51■□□□□ 0.71
PDLIM4-202ENST00000379018 NELL1Q92832 810 aa19.51■□□□□ 0.71
PDLIM4-202ENST00000379018 CHRDQ9H2X0 955 aa19.51■□□□□ 0.71
PDLIM4-202ENST00000379018 SLITRK6Q9H5Y7 841 aa19.51■□□□□ 0.71
PDLIM4-202ENST00000379018 LMAN1LQ9HAT1 526 aa19.51■□□□□ 0.71
PDLIM4-202ENST00000379018 TOPORSQ9NS56 1045 aaPredicted RBP19.51■□□□□ 0.71
PDLIM4-202ENST00000379018 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.51■□□□□ 0.71
PDLIM4-202ENST00000379018 PIAS3Q9Y6X2 628 aa19.51■□□□□ 0.71
PDLIM4-202ENST00000379018 K7ERI5 159 aa19.5■□□□□ 0.71
PDLIM4-202ENST00000379018 MAN2B1O00754 1011 aa19.5■□□□□ 0.71
PDLIM4-202ENST00000379018 ZNF197O14709 1029 aa19.5■□□□□ 0.71
PDLIM4-202ENST00000379018 OR52Z1P0C646 297 aa19.5■□□□□ 0.71
PDLIM4-202ENST00000379018 RPA1P27694 616 aa19.5■□□□□ 0.71
PDLIM4-202ENST00000379018 EFNA5P52803 228 aa19.5■□□□□ 0.71
PDLIM4-202ENST00000379018 CTXN3Q4LDR2 81 aa19.5■□□□□ 0.71
PDLIM4-202ENST00000379018 CYP4A22Q5TCH4 519 aa19.5■□□□□ 0.71
PDLIM4-202ENST00000379018 IQCEQ6IPM2 695 aa19.5■□□□□ 0.71
PDLIM4-202ENST00000379018 SLC8B1Q6J4K2 584 aa19.5■□□□□ 0.71
PDLIM4-202ENST00000379018 VITQ6UXI7 678 aa19.5■□□□□ 0.71
PDLIM4-202ENST00000379018 ZSWIM3Q96MP5 696 aa19.5■□□□□ 0.71
PDLIM4-202ENST00000379018 ASB16Q96NS5 453 aa19.5■□□□□ 0.71
PDLIM4-202ENST00000379018 CDT1Q9H211 546 aa19.5■□□□□ 0.71
PDLIM4-202ENST00000379018 BHMT2Q9H2M3 363 aa19.5■□□□□ 0.71
PDLIM4-202ENST00000379018 AVENQ9NQS1 362 aaPredicted RBP19.5■□□□□ 0.71
PDLIM4-202ENST00000379018 FBXL5Q9UKA1 691 aa19.5■□□□□ 0.71
PDLIM4-202ENST00000379018 ACACBO00763 2458 aa19.49■□□□□ 0.71
PDLIM4-202ENST00000379018 CITO14578 2027 aa19.49■□□□□ 0.71
PDLIM4-202ENST00000379018 H7C4K7 107 aa19.49■□□□□ 0.71
PDLIM4-202ENST00000379018 ABLIM3O94929 683 aa19.49■□□□□ 0.71
PDLIM4-202ENST00000379018 ATF2P15336 505 aa19.49■□□□□ 0.71
PDLIM4-202ENST00000379018 MCM4P33991 863 aa19.49■□□□□ 0.71
PDLIM4-202ENST00000379018 GRM5P41594 1212 aa19.49■□□□□ 0.71
PDLIM4-202ENST00000379018 TWF1Q12792 350 aa19.49■□□□□ 0.71
PDLIM4-202ENST00000379018 PPP2R5DQ14738 602 aa19.49■□□□□ 0.71
PDLIM4-202ENST00000379018 ECM1Q16610 540 aa19.49■□□□□ 0.71
PDLIM4-202ENST00000379018 IRF7Q92985 503 aa19.49■□□□□ 0.71
PDLIM4-202ENST00000379018 C18orf25Q96B23 403 aaPredicted RBP19.49■□□□□ 0.71
PDLIM4-202ENST00000379018 ZMAT2Q96NC0 199 aaKnown RBP19.49■□□□□ 0.71
PDLIM4-202ENST00000379018 RTKNQ9BST9 563 aa19.49■□□□□ 0.71
PDLIM4-202ENST00000379018 FAM126AQ9BYI3 521 aaPredicted RBP19.49■□□□□ 0.71
PDLIM4-202ENST00000379018 ZNF334Q9HCZ1 680 aaPredicted RBP19.49■□□□□ 0.71
PDLIM4-202ENST00000379018 SLC38A7Q9NVC3 462 aa19.49■□□□□ 0.71
PDLIM4-202ENST00000379018 TNFSF13BQ9Y275 285 aa19.49■□□□□ 0.71
PDLIM4-202ENST00000379018 RALGAPA1Q6GYQ0 2036 aa19.48■□□□□ 0.71
PDLIM4-202ENST00000379018 CPB1P15086 417 aa19.48■□□□□ 0.71
PDLIM4-202ENST00000379018 PSMC3P17980 439 aa19.48■□□□□ 0.71
PDLIM4-202ENST00000379018 TGM1P22735 817 aa19.48■□□□□ 0.71
PDLIM4-202ENST00000379018 CCNE1P24864 410 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms