RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 TRABDQ9H4I3 376 aa8.71□□□□□ -1.01
PTPRR-203ENST00000378778 VAV3Q9UKW4 847 aa8.71□□□□□ -1.01
PTPRR-203ENST00000378778 CLIC2O15247 247 aa8.71□□□□□ -1.02
PTPRR-203ENST00000378778 LRRN2O75325 713 aa8.71□□□□□ -1.02
PTPRR-203ENST00000378778 RNF8O76064 485 aa8.71□□□□□ -1.02
PTPRR-203ENST00000378778 IL1R1P14778 569 aa8.71□□□□□ -1.02
PTPRR-203ENST00000378778 TARSP26639 723 aaKnown RBP8.71□□□□□ -1.02
PTPRR-203ENST00000378778 ADCY8P40145 1251 aa8.71□□□□□ -1.02
PTPRR-203ENST00000378778 RHBDL3P58872 404 aa8.71□□□□□ -1.02
PTPRR-203ENST00000378778 CACNB1Q02641 598 aaPredicted RBP8.71□□□□□ -1.02
PTPRR-203ENST00000378778 LAMB3Q13751 1172 aa8.71□□□□□ -1.02
PTPRR-203ENST00000378778 CBWD6Q4V339 395 aa8.71□□□□□ -1.02
PTPRR-203ENST00000378778 CBWD3Q5JTY5 395 aa8.71□□□□□ -1.02
PTPRR-203ENST00000378778 CBWD5Q5RIA9 395 aa8.71□□□□□ -1.02
PTPRR-203ENST00000378778 SH2D4BQ5SQS7 431 aa8.71□□□□□ -1.02
PTPRR-203ENST00000378778 C6orf163Q5TEZ5 329 aa8.71□□□□□ -1.02
PTPRR-203ENST00000378778 SNX30Q5VWJ9 437 aa8.71□□□□□ -1.02
PTPRR-203ENST00000378778 ACAD10Q6JQN1 1059 aa8.71□□□□□ -1.02
PTPRR-203ENST00000378778 LRRC74BQ6ZQY2 392 aa8.71□□□□□ -1.02
PTPRR-203ENST00000378778 NLRP9Q7RTR0 991 aa8.71□□□□□ -1.02
PTPRR-203ENST00000378778 NBPF5PQ86XG9 351 aaPredicted RBP8.71□□□□□ -1.02
PTPRR-203ENST00000378778 MYCT1Q8N699 235 aa8.71□□□□□ -1.02
PTPRR-203ENST00000378778 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.71□□□□□ -1.02
PTPRR-203ENST00000378778 EPS8L1Q8TE68 723 aa8.71□□□□□ -1.02
PTPRR-203ENST00000378778 MKL1Q969V6 931 aa8.71□□□□□ -1.02
PTPRR-203ENST00000378778 NACC1Q96RE7 527 aa8.71□□□□□ -1.02
PTPRR-203ENST00000378778 CENPKQ9BS16 269 aa8.71□□□□□ -1.02
PTPRR-203ENST00000378778 FRMD8P1Q9BZ68 369 aaPredicted RBP8.71□□□□□ -1.02
PTPRR-203ENST00000378778 ST6GALNAC4Q9H4F1 302 aa8.71□□□□□ -1.02
PTPRR-203ENST00000378778 GPAMQ9HCL2 828 aa8.71□□□□□ -1.02
PTPRR-203ENST00000378778 DLGAP2Q9P1A6 1054 aa8.71□□□□□ -1.02
PTPRR-203ENST00000378778 PSMC3IPQ9P2W1 217 aaPredicted RBP8.71□□□□□ -1.02
PTPRR-203ENST00000378778 SAP30BPQ9UHR5 308 aaKnown RBP8.71□□□□□ -1.02
PTPRR-203ENST00000378778 GGT7Q9UJ14 662 aa8.71□□□□□ -1.02
PTPRR-203ENST00000378778 TMCO1Q9UM00 188 aa8.71□□□□□ -1.02
PTPRR-203ENST00000378778 SYNPO2Q9UMS6 1093 aa8.71□□□□□ -1.02
PTPRR-203ENST00000378778 ZHX2Q9Y6X8 837 aa8.71□□□□□ -1.02
PTPRR-203ENST00000378778 COMMD3-BMI1R4GMX3 469 aa8.71□□□□□ -1.02
PTPRR-203ENST00000378778 RGPD3A6NKT7 1758 aaPredicted RBP8.71□□□□□ -1.02
PTPRR-203ENST00000378778 RGPD4Q7Z3J3 1758 aa8.71□□□□□ -1.02
PTPRR-203ENST00000378778 FRMPD2Q68DX3 1309 aaPredicted RBP8.71□□□□□ -1.02
PTPRR-203ENST00000378778 MYH11P35749 1972 aa8.7□□□□□ -1.02
PTPRR-203ENST00000378778 EXOC1LA0A1B0GW35 172 aa8.7□□□□□ -1.02
PTPRR-203ENST00000378778 HAUS5O94927 633 aa8.7□□□□□ -1.02
PTPRR-203ENST00000378778 PSMG1O95456 288 aa8.7□□□□□ -1.02
PTPRR-203ENST00000378778 GH1P01241 217 aa8.7□□□□□ -1.02
PTPRR-203ENST00000378778 GTF2H1P32780 548 aa8.7□□□□□ -1.02
PTPRR-203ENST00000378778 CHKAP35790 457 aa8.7□□□□□ -1.02
PTPRR-203ENST00000378778 MARCKSL1P49006 195 aa8.7□□□□□ -1.02
PTPRR-203ENST00000378778 PPP2R5CQ13362 524 aa8.7□□□□□ -1.02
PTPRR-203ENST00000378778 RASA3Q14644 834 aa8.7□□□□□ -1.02
PTPRR-203ENST00000378778 MORF4L2Q15014 288 aa8.7□□□□□ -1.02
PTPRR-203ENST00000378778 TPTE2Q6XPS3 522 aa8.7□□□□□ -1.02
PTPRR-203ENST00000378778 C3orf67Q6ZVT6 689 aa8.7□□□□□ -1.02
PTPRR-203ENST00000378778 CLNKQ7Z7G1 428 aa8.7□□□□□ -1.02
PTPRR-203ENST00000378778 PCGF5Q86SE9 256 aa8.7□□□□□ -1.02
PTPRR-203ENST00000378778 CHSY1Q86X52 802 aa8.7□□□□□ -1.02
PTPRR-203ENST00000378778 FAM178BQ8IXR5 827 aa8.7□□□□□ -1.02
PTPRR-203ENST00000378778 ALDH16A1Q8IZ83 802 aa8.7□□□□□ -1.02
PTPRR-203ENST00000378778 MIPOL1Q8TD10 442 aa8.7□□□□□ -1.02
PTPRR-203ENST00000378778 SHC3Q92529 594 aa8.7□□□□□ -1.02
PTPRR-203ENST00000378778 APBB2Q92870 758 aa8.7□□□□□ -1.02
PTPRR-203ENST00000378778 GJA10Q969M2 543 aa8.7□□□□□ -1.02
PTPRR-203ENST00000378778 PTCD3Q96EY7 689 aaKnown RBP8.7□□□□□ -1.02
PTPRR-203ENST00000378778 ZNF184Q99676 751 aaPredicted RBP8.7□□□□□ -1.02
PTPRR-203ENST00000378778 HSD17B14Q9BPX1 270 aa8.7□□□□□ -1.02
PTPRR-203ENST00000378778 EIF2AK1Q9BQI3 630 aaKnown RBP8.7□□□□□ -1.02
PTPRR-203ENST00000378778 RUSC1Q9BVN2 902 aa8.7□□□□□ -1.02
PTPRR-203ENST00000378778 BHMT2Q9H2M3 363 aa8.7□□□□□ -1.02
PTPRR-203ENST00000378778 EPB41L1Q9H4G0 881 aa8.7□□□□□ -1.02
PTPRR-203ENST00000378778 SUDS3Q9H7L9 328 aaPredicted RBP8.7□□□□□ -1.02
PTPRR-203ENST00000378778 UBE2TQ9NPD8 197 aaPredicted RBP8.7□□□□□ -1.02
PTPRR-203ENST00000378778 LRRC4BQ9NT99 713 aa8.7□□□□□ -1.02
PTPRR-203ENST00000378778 DRG1Q9Y295 367 aaKnown RBP8.7□□□□□ -1.02
PTPRR-203ENST00000378778 PTPN22Q9Y2R2 807 aa8.7□□□□□ -1.02
PTPRR-203ENST00000378778 UMODL1Q5DID0 1318 aa8.7□□□□□ -1.02
PTPRR-203ENST00000378778 ATRNL1Q5VV63 1379 aa8.7□□□□□ -1.02
PTPRR-203ENST00000378778 PIK3CDO00329 1044 aa8.7□□□□□ -1.02
PTPRR-203ENST00000378778 IPO5O00410 1097 aaKnown RBP8.7□□□□□ -1.02
PTPRR-203ENST00000378778 TYROBPO43914 113 aa8.7□□□□□ -1.02
PTPRR-203ENST00000378778 ZC3H11AO75152 810 aaKnown RBP eCLIP8.7□□□□□ -1.02
PTPRR-203ENST00000378778 AP1G2O75843 785 aa8.7□□□□□ -1.02
PTPRR-203ENST00000378778 FAM155BO75949 473 aa8.7□□□□□ -1.02
PTPRR-203ENST00000378778 CREB1P16220 341 aa8.7□□□□□ -1.02
PTPRR-203ENST00000378778 CHRNB2P17787 502 aa8.7□□□□□ -1.02
PTPRR-203ENST00000378778 GM2AP17900 193 aa8.7□□□□□ -1.02
PTPRR-203ENST00000378778 EPHB2P29323 1055 aa8.7□□□□□ -1.02
PTPRR-203ENST00000378778 PHBP35232 272 aa8.7□□□□□ -1.02
PTPRR-203ENST00000378778 CACNA2D1P54289 1103 aa8.7□□□□□ -1.02
PTPRR-203ENST00000378778 CBLBQ13191 982 aa8.7□□□□□ -1.02
PTPRR-203ENST00000378778 ARHGAP44Q17R89 818 aa8.7□□□□□ -1.02
PTPRR-203ENST00000378778 CTC1Q2NKJ3 1217 aa8.7□□□□□ -1.02
PTPRR-203ENST00000378778 LRRC23Q53EV4 343 aaPredicted RBP8.7□□□□□ -1.02
PTPRR-203ENST00000378778 TMEM63BQ5T3F8 832 aa8.7□□□□□ -1.02
PTPRR-203ENST00000378778 RC3H1Q5TC82 1133 aaKnown RBP8.7□□□□□ -1.02
PTPRR-203ENST00000378778 IZUMO3Q5VZ72 239 aa8.7□□□□□ -1.02
PTPRR-203ENST00000378778 CCDC62Q6P9F0 684 aa8.7□□□□□ -1.02
PTPRR-203ENST00000378778 PHLDB2Q86SQ0 1253 aa8.7□□□□□ -1.02
PTPRR-203ENST00000378778 USP37Q86T82 979 aa8.7□□□□□ -1.02
PTPRR-203ENST00000378778 DNAAF5Q86Y56 855 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms