RNA–Protein interactions for RNA: ENST00000378198.8

TDP2-202, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TDP2, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-202ENST00000378198 FNBP1Q96RU3 617 aa19.39■□□□□ 0.69
TDP2-202ENST00000378198 CCDC113Q9H0I3 377 aa19.39■□□□□ 0.69
TDP2-202ENST00000378198 XPNPEP1Q9NQW7 623 aa19.39■□□□□ 0.69
TDP2-202ENST00000378198 DOCK1Q14185 1865 aa19.38■□□□□ 0.69
TDP2-202ENST00000378198 NFASCO94856 1347 aa19.38■□□□□ 0.69
TDP2-202ENST00000378198 CALCAP01258 141 aa19.38■□□□□ 0.69
TDP2-202ENST00000378198 LLGL1Q15334 1064 aa19.38■□□□□ 0.69
TDP2-202ENST00000378198 ZACNQ401N2 412 aa19.38■□□□□ 0.69
TDP2-202ENST00000378198 TRIM72Q6ZMU5 477 aa19.38■□□□□ 0.69
TDP2-202ENST00000378198 JPH2Q9BR39 696 aaPredicted RBP19.38■□□□□ 0.69
TDP2-202ENST00000378198 DDX23Q9BUQ8 820 aaKnown RBP19.38■□□□□ 0.69
TDP2-202ENST00000378198 TRAIPQ9BWF2 469 aa19.38■□□□□ 0.69
TDP2-202ENST00000378198 CYP26B1Q9NR63 512 aa19.38■□□□□ 0.69
TDP2-202ENST00000378198 SEPT9Q9UHD8 586 aaPredicted RBP19.38■□□□□ 0.69
TDP2-202ENST00000378198 DNAJC8O75937 253 aaPredicted RBP19.37■□□□□ 0.69
TDP2-202ENST00000378198 PROSCO94903 275 aa19.37■□□□□ 0.69
TDP2-202ENST00000378198 TTC4O95801 387 aa19.37■□□□□ 0.69
TDP2-202ENST00000378198 C4BPAP04003 597 aaKnown RBP19.37■□□□□ 0.69
TDP2-202ENST00000378198 ATF2P15336 505 aa19.37■□□□□ 0.69
TDP2-202ENST00000378198 LIG4P49917 911 aa19.37■□□□□ 0.69
TDP2-202ENST00000378198 ITGA8P53708 1063 aa19.37■□□□□ 0.69
TDP2-202ENST00000378198 LONRF1Q17RB8 773 aa19.37■□□□□ 0.69
TDP2-202ENST00000378198 LIN9Q5TKA1 542 aa19.37■□□□□ 0.69
TDP2-202ENST00000378198 AEBP2Q6ZN18 517 aaPredicted RBP19.37■□□□□ 0.69
TDP2-202ENST00000378198 MON1BQ7L1V2 547 aa19.37■□□□□ 0.69
TDP2-202ENST00000378198 BBOF1Q8ND07 529 aa19.37■□□□□ 0.69
TDP2-202ENST00000378198 IPO4Q8TEX9 1081 aaKnown RBP19.37■□□□□ 0.69
TDP2-202ENST00000378198 ATG4CQ96DT6 458 aa19.37■□□□□ 0.69
TDP2-202ENST00000378198 POLR3FQ9H1D9 316 aaPredicted RBP19.37■□□□□ 0.69
TDP2-202ENST00000378198 RIPK3Q9Y572 518 aa19.37■□□□□ 0.69
TDP2-202ENST00000378198 PHIPQ8WWQ0 1821 aa19.37■□□□□ 0.69
TDP2-202ENST00000378198 RLFQ13129 1914 aa19.37■□□□□ 0.69
TDP2-202ENST00000378198 PSTPIP1O43586 416 aa19.37■□□□□ 0.69
TDP2-202ENST00000378198 SORBS3O60504 671 aa19.37■□□□□ 0.69
TDP2-202ENST00000378198 ACSL3O95573 720 aa19.37■□□□□ 0.69
TDP2-202ENST00000378198 HLA-DRAP01903 254 aa19.37■□□□□ 0.69
TDP2-202ENST00000378198 POTEJP0CG39 1038 aa19.37■□□□□ 0.69
TDP2-202ENST00000378198 TNNI1P19237 187 aa19.37■□□□□ 0.69
TDP2-202ENST00000378198 CHKAP35790 457 aa19.37■□□□□ 0.69
TDP2-202ENST00000378198 NSUN6Q8TEA1 469 aaKnown RBP19.37■□□□□ 0.69
TDP2-202ENST00000378198 ATG4AQ8WYN0 398 aa19.37■□□□□ 0.69
TDP2-202ENST00000378198 CDHR1Q96JP9 859 aa19.37■□□□□ 0.69
TDP2-202ENST00000378198 SCLT1Q96NL6 688 aa19.37■□□□□ 0.69
TDP2-202ENST00000378198 TRIM7Q9C029 511 aa19.37■□□□□ 0.69
TDP2-202ENST00000378198 MRPL47Q9HD33 250 aaKnown RBP19.37■□□□□ 0.69
TDP2-202ENST00000378198 STK32BQ9NY57 414 aa19.37■□□□□ 0.69
TDP2-202ENST00000378198 SLC9A2Q9UBY0 812 aa19.37■□□□□ 0.69
TDP2-202ENST00000378198 ANAPC5Q9UJX4 755 aa19.37■□□□□ 0.69
TDP2-202ENST00000378198 SCAF8Q9UPN6 1271 aaKnown RBP19.37■□□□□ 0.69
TDP2-202ENST00000378198 VIMP08670 466 aaKnown RBP19.36■□□□□ 0.69
TDP2-202ENST00000378198 PIK3CAP42336 1068 aa19.36■□□□□ 0.69
TDP2-202ENST00000378198 XRCC4Q13426 336 aa19.36■□□□□ 0.69
TDP2-202ENST00000378198 CCNG2Q16589 344 aa19.36■□□□□ 0.69
TDP2-202ENST00000378198 CCDC38Q502W7 563 aa19.36■□□□□ 0.69
TDP2-202ENST00000378198 PPP1R2P3Q6NXS1 205 aa19.36■□□□□ 0.69
TDP2-202ENST00000378198 RHOT1Q8IXI2 618 aa19.36■□□□□ 0.69
TDP2-202ENST00000378198 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.36■□□□□ 0.69
TDP2-202ENST00000378198 ARHGEF2Q92974 986 aaKnown RBP19.36■□□□□ 0.69
TDP2-202ENST00000378198 VCPIP1Q96JH7 1222 aa19.36■□□□□ 0.69
TDP2-202ENST00000378198 JPH1Q9HDC5 661 aaPredicted RBP19.36■□□□□ 0.69
TDP2-202ENST00000378198 STYXL1Q9Y6J8 313 aa19.36■□□□□ 0.69
TDP2-202ENST00000378198 GSTA1P08263 222 aa19.36■□□□□ 0.69
TDP2-202ENST00000378198 ADCY8P40145 1251 aa19.36■□□□□ 0.69
TDP2-202ENST00000378198 PRKCEQ02156 737 aa19.36■□□□□ 0.69
TDP2-202ENST00000378198 STRN3Q13033 797 aa19.36■□□□□ 0.69
TDP2-202ENST00000378198 KLF1Q13351 362 aaPredicted RBP19.36■□□□□ 0.69
TDP2-202ENST00000378198 CIAPIN1Q6FI81 312 aa19.36■□□□□ 0.69
TDP2-202ENST00000378198 CCDC50Q8IVM0 306 aa19.36■□□□□ 0.69
TDP2-202ENST00000378198 FUKQ8N0W3 1084 aa19.36■□□□□ 0.69
TDP2-202ENST00000378198 ELAC2Q9BQ52 826 aaKnown RBP19.36■□□□□ 0.69
TDP2-202ENST00000378198 HERPUD2Q9BSE4 406 aa19.36■□□□□ 0.69
TDP2-202ENST00000378198 A1CFQ9NQ94 594 aaKnown RBP19.36■□□□□ 0.69
TDP2-202ENST00000378198 UMODL1Q5DID0 1318 aa19.35■□□□□ 0.69
TDP2-202ENST00000378198 TCEA3O75764 348 aa19.35■□□□□ 0.69
TDP2-202ENST00000378198 TDRD10Q5VZ19 366 aaKnown RBP19.35■□□□□ 0.69
TDP2-202ENST00000378198 ABHD15Q6UXT9 468 aa19.35■□□□□ 0.69
TDP2-202ENST00000378198 CCDC60Q8IWA6 550 aaPredicted RBP19.35■□□□□ 0.69
TDP2-202ENST00000378198 KCNN1Q92952 543 aa19.35■□□□□ 0.69
TDP2-202ENST00000378198 AGO2Q9UKV8 859 aaKnown RBP19.35■□□□□ 0.69
TDP2-202ENST00000378198 CHUKO15111 745 aa19.34■□□□□ 0.69
TDP2-202ENST00000378198 RGS20O76081 388 aa19.34■□□□□ 0.69
TDP2-202ENST00000378198 RALAP11233 206 aa19.34■□□□□ 0.69
TDP2-202ENST00000378198 ACO1P21399 889 aaKnown RBP19.34■□□□□ 0.69
TDP2-202ENST00000378198 KCNA3P22001 575 aa19.34■□□□□ 0.69
TDP2-202ENST00000378198 IFNAR2P48551 515 aa19.34■□□□□ 0.69
TDP2-202ENST00000378198 OAZ1P54368 228 aa19.34■□□□□ 0.69
TDP2-202ENST00000378198 ACTR2P61160 394 aa19.34■□□□□ 0.69
TDP2-202ENST00000378198 XKR3Q5GH77 459 aa19.34■□□□□ 0.69
TDP2-202ENST00000378198 LMBRD2Q68DH5 695 aaPredicted RBP19.34■□□□□ 0.69
TDP2-202ENST00000378198 CHADLQ6NUI6 762 aa19.34■□□□□ 0.69
TDP2-202ENST00000378198 MIS18BP1Q6P0N0 1132 aa19.34■□□□□ 0.69
TDP2-202ENST00000378198 PHLDB2Q86SQ0 1253 aa19.34■□□□□ 0.69
TDP2-202ENST00000378198 KATNAL2Q8IYT4 538 aa19.34■□□□□ 0.69
TDP2-202ENST00000378198 ABRAQ8N0Z2 381 aa19.34■□□□□ 0.69
TDP2-202ENST00000378198 CCDC89Q8N998 374 aa19.34■□□□□ 0.69
TDP2-202ENST00000378198 DYDC1Q8WWB3 177 aa19.34■□□□□ 0.69
TDP2-202ENST00000378198 SGSM3Q96HU1 749 aa19.34■□□□□ 0.69
TDP2-202ENST00000378198 NEU2Q9Y3R4 380 aa19.34■□□□□ 0.69
TDP2-202ENST00000378198 SCINQ9Y6U3 715 aa19.34■□□□□ 0.69
TDP2-202ENST00000378198 THAP12O43422 761 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms