RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 VPS39Q96JC1 886 aa15.87■□□□□ 0.13
NPHP4-201ENST00000378156 DUSP9Q99956 384 aaKnown RBP15.87■□□□□ 0.13
NPHP4-201ENST00000378156 ORC6Q9Y5N6 252 aa15.87■□□□□ 0.13
NPHP4-201ENST00000378156 SNX9Q9Y5X1 595 aa15.87■□□□□ 0.13
NPHP4-201ENST00000378156 A0A0U1RQJ8 604 aa15.87■□□□□ 0.13
NPHP4-201ENST00000378156 TOM1L1O75674 476 aa15.87■□□□□ 0.13
NPHP4-201ENST00000378156 CYP2B6P20813 491 aa15.87■□□□□ 0.13
NPHP4-201ENST00000378156 PMLP29590 882 aa15.87■□□□□ 0.13
NPHP4-201ENST00000378156 SREBF1P36956 1147 aa15.87■□□□□ 0.13
NPHP4-201ENST00000378156 SEC24CP53992 1094 aa15.87■□□□□ 0.13
NPHP4-201ENST00000378156 BACE1P56817 501 aa15.87■□□□□ 0.13
NPHP4-201ENST00000378156 GPS1Q13098 491 aa15.87■□□□□ 0.13
NPHP4-201ENST00000378156 IER5Q5VY09 327 aa15.87■□□□□ 0.13
NPHP4-201ENST00000378156 MRPL46Q9H2W6 279 aaKnown RBP15.87■□□□□ 0.13
NPHP4-201ENST00000378156 ERAP1Q9NZ08 941 aa15.87■□□□□ 0.13
NPHP4-201ENST00000378156 UVRAGQ9P2Y5 699 aa15.87■□□□□ 0.13
NPHP4-201ENST00000378156 ALG6Q9Y672 507 aa15.87■□□□□ 0.13
NPHP4-201ENST00000378156 CYTH3O43739 400 aa15.87■□□□□ 0.13
NPHP4-201ENST00000378156 HBP1O60381 514 aa15.87■□□□□ 0.13
NPHP4-201ENST00000378156 TSTA3Q13630 321 aaPredicted RBP15.87■□□□□ 0.13
NPHP4-201ENST00000378156 LRRC43Q8N309 656 aa15.87■□□□□ 0.13
NPHP4-201ENST00000378156 DHX35Q9H5Z1 703 aaKnown RBP15.87■□□□□ 0.13
NPHP4-201ENST00000378156 TRPA1O75762 1119 aa15.86■□□□□ 0.13
NPHP4-201ENST00000378156 TMEM253P0C7T8 217 aa15.86■□□□□ 0.13
NPHP4-201ENST00000378156 ZNF473Q8WTR7 871 aaKnown RBP15.86■□□□□ 0.13
NPHP4-201ENST00000378156 SNF8Q96H20 258 aa15.86■□□□□ 0.13
NPHP4-201ENST00000378156 PON1P27169 355 aa15.86■□□□□ 0.13
NPHP4-201ENST00000378156 LSP1P33241 339 aa15.86■□□□□ 0.13
NPHP4-201ENST00000378156 CDH6P55285 790 aa15.86■□□□□ 0.13
NPHP4-201ENST00000378156 NR1H3Q13133 447 aa15.86■□□□□ 0.13
NPHP4-201ENST00000378156 IZUMO3Q5VZ72 239 aa15.86■□□□□ 0.13
NPHP4-201ENST00000378156 CPA5Q8WXQ8 436 aa15.86■□□□□ 0.13
NPHP4-201ENST00000378156 MTFR1LQ9H019 292 aa15.86■□□□□ 0.13
NPHP4-201ENST00000378156 POLIQ9UNA4 740 aa15.86■□□□□ 0.13
NPHP4-201ENST00000378156 CFAP73A6NFT4 308 aa15.86■□□□□ 0.13
NPHP4-201ENST00000378156 BNIP3LO60238 219 aa15.86■□□□□ 0.13
NPHP4-201ENST00000378156 SLC1A1P43005 524 aa15.86■□□□□ 0.13
NPHP4-201ENST00000378156 CDK17Q00537 523 aa15.86■□□□□ 0.13
NPHP4-201ENST00000378156 EFHC2Q5JST6 749 aa15.86■□□□□ 0.13
NPHP4-201ENST00000378156 TEX2Q8IWB9 1127 aa15.86■□□□□ 0.13
NPHP4-201ENST00000378156 ARHGAP18Q8N392 663 aa15.86■□□□□ 0.13
NPHP4-201ENST00000378156 TRIML2Q8N7C3 387 aa15.86■□□□□ 0.13
NPHP4-201ENST00000378156 MEFVO15553 781 aaPredicted RBP15.86■□□□□ 0.13
NPHP4-201ENST00000378156 SPAG7O75391 227 aa15.86■□□□□ 0.13
NPHP4-201ENST00000378156 RARBP10826 455 aa15.86■□□□□ 0.13
NPHP4-201ENST00000378156 COMTP21964 271 aa15.86■□□□□ 0.13
NPHP4-201ENST00000378156 MMP14P50281 582 aa15.86■□□□□ 0.13
NPHP4-201ENST00000378156 HUNKP57058 714 aa15.86■□□□□ 0.13
NPHP4-201ENST00000378156 BYSLQ13895 437 aaKnown RBP15.86■□□□□ 0.13
NPHP4-201ENST00000378156 HEATR6Q6AI08 1181 aaKnown RBP15.86■□□□□ 0.13
NPHP4-201ENST00000378156 DNAAF5Q86Y56 855 aa15.86■□□□□ 0.13
NPHP4-201ENST00000378156 LRRC71Q8N4P6 559 aa15.86■□□□□ 0.13
NPHP4-201ENST00000378156 SCFD1Q8WVM8 642 aa15.86■□□□□ 0.13
NPHP4-201ENST00000378156 TTC17Q96AE7 1141 aa15.86■□□□□ 0.13
NPHP4-201ENST00000378156 TTC25Q96NG3 672 aa15.86■□□□□ 0.13
NPHP4-201ENST00000378156 TARS2Q9BW92 718 aaKnown RBP15.86■□□□□ 0.13
NPHP4-201ENST00000378156 UNC45AQ9H3U1 944 aa15.86■□□□□ 0.13
NPHP4-201ENST00000378156 C17orf75Q9HAS0 396 aa15.86■□□□□ 0.13
NPHP4-201ENST00000378156 KLHL11Q9NVR0 708 aa15.86■□□□□ 0.13
NPHP4-201ENST00000378156 PI4K2BG5E9Z4 385 aa15.85■□□□□ 0.13
NPHP4-201ENST00000378156 SASH3O75995 380 aa15.85■□□□□ 0.13
NPHP4-201ENST00000378156 KRT38O76015 456 aa15.85■□□□□ 0.13
NPHP4-201ENST00000378156 KCNJ1P48048 391 aa15.85■□□□□ 0.13
NPHP4-201ENST00000378156 ACTR2P61160 394 aa15.85■□□□□ 0.13
NPHP4-201ENST00000378156 ACTN3Q08043 901 aaPredicted RBP15.85■□□□□ 0.13
NPHP4-201ENST00000378156 TMEM132DQ14C87 1099 aa15.85■□□□□ 0.13
NPHP4-201ENST00000378156 LRP10Q7Z4F1 713 aa15.85■□□□□ 0.13
NPHP4-201ENST00000378156 JAMLQ86YT9 394 aa15.85■□□□□ 0.13
NPHP4-201ENST00000378156 GMCL1P1Q8NEA9 526 aa15.85■□□□□ 0.13
NPHP4-201ENST00000378156 TPCN2Q8NHX9 752 aa15.85■□□□□ 0.13
NPHP4-201ENST00000378156 KATNAL1Q9BW62 490 aa15.85■□□□□ 0.13
NPHP4-201ENST00000378156 ISCUQ9H1K1 167 aa15.85■□□□□ 0.13
NPHP4-201ENST00000378156 A0A0G2JND7 137 aa15.85■□□□□ 0.13
NPHP4-201ENST00000378156 PHF2O75151 1096 aa15.85■□□□□ 0.13
NPHP4-201ENST00000378156 RBBP8NLQ8NC74 664 aaPredicted RBP15.85■□□□□ 0.13
NPHP4-201ENST00000378156 RAET1EQ8TD07 263 aa15.85■□□□□ 0.13
NPHP4-201ENST00000378156 NUDT12Q9BQG2 462 aa15.85■□□□□ 0.13
NPHP4-201ENST00000378156 TMEM8AQ9HCN3 771 aa15.85■□□□□ 0.13
NPHP4-201ENST00000378156 AGPAT3Q9NRZ7 376 aa15.85■□□□□ 0.13
NPHP4-201ENST00000378156 PRMT7Q9NVM4 692 aaPredicted RBP15.85■□□□□ 0.13
NPHP4-201ENST00000378156 MAP3K20Q9NYL2 800 aaKnown RBP15.85■□□□□ 0.13
NPHP4-201ENST00000378156 P4HA2O15460 535 aa15.85■□□□□ 0.13
NPHP4-201ENST00000378156 HLA-DRAP01903 254 aa15.85■□□□□ 0.13
NPHP4-201ENST00000378156 CASKIN2Q8WXE0 1202 aa15.85■□□□□ 0.13
NPHP4-201ENST00000378156 DHX38Q92620 1227 aaKnown RBP15.85■□□□□ 0.13
NPHP4-201ENST00000378156 PCDHB2Q9Y5E7 798 aa15.85■□□□□ 0.13
NPHP4-201ENST00000378156 PHF20L1A8MW92 1017 aa15.85■□□□□ 0.13
NPHP4-201ENST00000378156 GIT2Q14161 759 aa15.85■□□□□ 0.13
NPHP4-201ENST00000378156 EFCAB12Q6NXP0 572 aa15.85■□□□□ 0.13
NPHP4-201ENST00000378156 LRIG3Q6UXM1 1119 aa15.85■□□□□ 0.13
NPHP4-201ENST00000378156 UBN1Q9NPG3 1134 aa15.85■□□□□ 0.13
NPHP4-201ENST00000378156 WDR35Q9P2L0 1181 aa15.85■□□□□ 0.13
NPHP4-201ENST00000378156 SLC8A2Q9UPR5 921 aa15.85■□□□□ 0.13
NPHP4-201ENST00000378156 NME3Q13232 169 aa15.84■□□□□ 0.13
NPHP4-201ENST00000378156 STILQ15468 1287 aa15.84■□□□□ 0.13
NPHP4-201ENST00000378156 ATF7IP2Q5U623 682 aa15.84■□□□□ 0.13
NPHP4-201ENST00000378156 FAM83AQ86UY5 434 aa15.84■□□□□ 0.13
NPHP4-201ENST00000378156 ZBED8Q8IZ13 594 aa15.84■□□□□ 0.13
NPHP4-201ENST00000378156 MAML1Q92585 1016 aa15.84■□□□□ 0.13
NPHP4-201ENST00000378156 FAM163AQ96GL9 167 aaPredicted RBP15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms