RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 SLC39A4Q6P5W5 647 aa12.6□□□□□ -0.39
SMARCE1-203ENST00000377808 PDXDC1Q6P996 788 aa12.6□□□□□ -0.39
SMARCE1-203ENST00000377808 CCDC149Q6ZUS6 474 aa12.6□□□□□ -0.39
SMARCE1-203ENST00000377808 LNX1Q8TBB1 728 aaPredicted RBP12.6□□□□□ -0.39
SMARCE1-203ENST00000377808 FEZF2Q8TBJ5 459 aa12.6□□□□□ -0.39
SMARCE1-203ENST00000377808 PIK3R5Q8WYR1 880 aa12.6□□□□□ -0.39
SMARCE1-203ENST00000377808 ACCSQ96QU6 501 aa12.6□□□□□ -0.39
SMARCE1-203ENST00000377808 TNMDQ9H2S6 317 aa12.6□□□□□ -0.39
SMARCE1-203ENST00000377808 IKZF4Q9H2S9 585 aa12.6□□□□□ -0.39
SMARCE1-203ENST00000377808 PLEKHA5Q9HAU0 1116 aa12.6□□□□□ -0.39
SMARCE1-203ENST00000377808 AGO2Q9UKV8 859 aaKnown RBP12.6□□□□□ -0.39
SMARCE1-203ENST00000377808 PCDHA7Q9UN72 937 aa12.6□□□□□ -0.39
SMARCE1-203ENST00000377808 NCOR1O75376 2440 aa12.59□□□□□ -0.39
SMARCE1-203ENST00000377808 A0A0B4J269 797 aa12.59□□□□□ -0.39
SMARCE1-203ENST00000377808 C2CD4DB7Z1M9 353 aa12.59□□□□□ -0.39
SMARCE1-203ENST00000377808 XPOTO43592 962 aaKnown RBP12.59□□□□□ -0.39
SMARCE1-203ENST00000377808 RFPL2O75678 378 aa12.59□□□□□ -0.39
SMARCE1-203ENST00000377808 FGFR3P22607 806 aa12.59□□□□□ -0.39
SMARCE1-203ENST00000377808 RPL9P32969 192 aaKnown RBP12.59□□□□□ -0.39
SMARCE1-203ENST00000377808 GUCY2FP51841 1108 aa12.59□□□□□ -0.39
SMARCE1-203ENST00000377808 ARPP19P56211 112 aa12.59□□□□□ -0.39
SMARCE1-203ENST00000377808 AMPD3Q01432 767 aa12.59□□□□□ -0.39
SMARCE1-203ENST00000377808 ENOX2Q16206 610 aaKnown RBP12.59□□□□□ -0.39
SMARCE1-203ENST00000377808 L1TD1Q5T7N2 865 aaKnown RBP12.59□□□□□ -0.39
SMARCE1-203ENST00000377808 SLFN12LQ6IEE8 588 aa12.59□□□□□ -0.39
SMARCE1-203ENST00000377808 TMEM130Q8N3G9 435 aa12.59□□□□□ -0.39
SMARCE1-203ENST00000377808 TDRD5Q8NAT2 981 aaKnown RBP12.59□□□□□ -0.39
SMARCE1-203ENST00000377808 KREMEN2Q8NCW0 462 aa12.59□□□□□ -0.39
SMARCE1-203ENST00000377808 SMG7Q92540 1137 aaKnown RBP12.59□□□□□ -0.39
SMARCE1-203ENST00000377808 KCNN1Q92952 543 aa12.59□□□□□ -0.39
SMARCE1-203ENST00000377808 HVCN1Q96D96 273 aa12.59□□□□□ -0.39
SMARCE1-203ENST00000377808 CLSTN3Q9BQT9 956 aa12.59□□□□□ -0.39
SMARCE1-203ENST00000377808 CUEDC2Q9H467 287 aa12.59□□□□□ -0.39
SMARCE1-203ENST00000377808 ST6GALNAC4Q9H4F1 302 aa12.59□□□□□ -0.39
SMARCE1-203ENST00000377808 UBQLN1Q9UMX0 589 aaKnown RBP12.59□□□□□ -0.39
SMARCE1-203ENST00000377808 PCDHB13Q9Y5F0 798 aa12.59□□□□□ -0.39
SMARCE1-203ENST00000377808 CDY1Q9Y6F8 540 aa12.59□□□□□ -0.39
SMARCE1-203ENST00000377808 TTC26A0AVF1 554 aa12.58□□□□□ -0.4
SMARCE1-203ENST00000377808 ADAM12O43184 909 aa12.58□□□□□ -0.4
SMARCE1-203ENST00000377808 PRPF6O94906 941 aaKnown RBP12.58□□□□□ -0.4
SMARCE1-203ENST00000377808 OR1D2P34982 312 aa12.58□□□□□ -0.4
SMARCE1-203ENST00000377808 CASP5P51878 434 aa12.58□□□□□ -0.4
SMARCE1-203ENST00000377808 KRT85P78386 507 aa12.58□□□□□ -0.4
SMARCE1-203ENST00000377808 KCNA1Q09470 495 aa12.58□□□□□ -0.4
SMARCE1-203ENST00000377808 E2F4Q16254 413 aa12.58□□□□□ -0.4
SMARCE1-203ENST00000377808 VARS2Q5ST30 1063 aaKnown RBP12.58□□□□□ -0.4
SMARCE1-203ENST00000377808 AXDND1Q5T1B0 1012 aaPredicted RBP12.58□□□□□ -0.4
SMARCE1-203ENST00000377808 JADE1Q6IE81 842 aa12.58□□□□□ -0.4
SMARCE1-203ENST00000377808 CD300LGQ6UXG3 332 aa12.58□□□□□ -0.4
SMARCE1-203ENST00000377808 C15orf39Q6ZRI6 1047 aa12.58□□□□□ -0.4
SMARCE1-203ENST00000377808 ANKS3Q6ZW76 656 aa12.58□□□□□ -0.4
SMARCE1-203ENST00000377808 STXBP4Q6ZWJ1 553 aa12.58□□□□□ -0.4
SMARCE1-203ENST00000377808 GPR149Q86SP6 731 aa12.58□□□□□ -0.4
SMARCE1-203ENST00000377808 GPR65Q8IYL9 337 aa12.58□□□□□ -0.4
SMARCE1-203ENST00000377808 CEP57L1Q8IYX8 460 aa12.58□□□□□ -0.4
SMARCE1-203ENST00000377808 BEST2Q8NFU1 509 aa12.58□□□□□ -0.4
SMARCE1-203ENST00000377808 CHAMP1Q96JM3 812 aa12.58□□□□□ -0.4
SMARCE1-203ENST00000377808 SPATA32Q96LK8 384 aa12.58□□□□□ -0.4
SMARCE1-203ENST00000377808 FGFBP2Q9BYJ0 223 aa12.58□□□□□ -0.4
SMARCE1-203ENST00000377808 PLEKHA4Q9H4M7 779 aa12.58□□□□□ -0.4
SMARCE1-203ENST00000377808 CPSF3Q9UKF6 684 aaKnown RBP12.58□□□□□ -0.4
SMARCE1-203ENST00000377808 POLIQ9UNA4 740 aa12.58□□□□□ -0.4
SMARCE1-203ENST00000377808 FRMD3A2A2Y4 597 aa12.57□□□□□ -0.4
SMARCE1-203ENST00000377808 FAM189A1O60320 539 aa12.57□□□□□ -0.4
SMARCE1-203ENST00000377808 PPP1R37O75864 691 aa12.57□□□□□ -0.4
SMARCE1-203ENST00000377808 C8AP07357 584 aa12.57□□□□□ -0.4
SMARCE1-203ENST00000377808 NFICP08651 508 aa12.57□□□□□ -0.4
SMARCE1-203ENST00000377808 AFMP43652 599 aa12.57□□□□□ -0.4
SMARCE1-203ENST00000377808 ALCAMQ13740 583 aa12.57□□□□□ -0.4
SMARCE1-203ENST00000377808 TMEM132DQ14C87 1099 aa12.57□□□□□ -0.4
SMARCE1-203ENST00000377808 POSTNQ15063 836 aa12.57□□□□□ -0.4
SMARCE1-203ENST00000377808 PPM1LQ5SGD2 360 aa12.57□□□□□ -0.4
SMARCE1-203ENST00000377808 RESP18Q5W5W9 173 aa12.57□□□□□ -0.4
SMARCE1-203ENST00000377808 DSTYKQ6XUX3 929 aa12.57□□□□□ -0.4
SMARCE1-203ENST00000377808 CD302Q8IX05 232 aa12.57□□□□□ -0.4
SMARCE1-203ENST00000377808 HPS3Q969F9 1004 aa12.57□□□□□ -0.4
SMARCE1-203ENST00000377808 ACSF2Q96CM8 615 aaPredicted RBP12.57□□□□□ -0.4
SMARCE1-203ENST00000377808 SAAL1Q96ER3 474 aa12.57□□□□□ -0.4
SMARCE1-203ENST00000377808 FAM213AQ9BRX8 229 aa12.57□□□□□ -0.4
SMARCE1-203ENST00000377808 LRFN3Q9BTN0 628 aa12.57□□□□□ -0.4
SMARCE1-203ENST00000377808 TRIM9Q9C026 710 aa12.57□□□□□ -0.4
SMARCE1-203ENST00000377808 BLZF1Q9H2G9 400 aa12.57□□□□□ -0.4
SMARCE1-203ENST00000377808 PCIF1Q9H4Z3 704 aa12.57□□□□□ -0.4
SMARCE1-203ENST00000377808 OLFML3Q9NRN5 406 aa12.57□□□□□ -0.4
SMARCE1-203ENST00000377808 KBTBD4Q9NVX7 518 aa12.57□□□□□ -0.4
SMARCE1-203ENST00000377808 MTRRQ9UBK8 725 aa12.57□□□□□ -0.4
SMARCE1-203ENST00000377808 FBXW11Q9UKB1 542 aa12.57□□□□□ -0.4
SMARCE1-203ENST00000377808 ATP6V1DQ9Y5K8 247 aa12.57□□□□□ -0.4
SMARCE1-203ENST00000377808 VWA8A3KMH1 1905 aa12.56□□□□□ -0.4
SMARCE1-203ENST00000377808 GOLGA8IPA6NC78 632 aa12.56□□□□□ -0.4
SMARCE1-203ENST00000377808 GOLGA8JA6NMD2 632 aa12.56□□□□□ -0.4
SMARCE1-203ENST00000377808 H7C4K7 107 aa12.56□□□□□ -0.4
SMARCE1-203ENST00000377808 SYN3O14994 580 aa12.56□□□□□ -0.4
SMARCE1-203ENST00000377808 CCL16O15467 120 aa12.56□□□□□ -0.4
SMARCE1-203ENST00000377808 COL9A1P20849 921 aa12.56□□□□□ -0.4
SMARCE1-203ENST00000377808 CASP1P29466 404 aa12.56□□□□□ -0.4
SMARCE1-203ENST00000377808 GBP2P32456 591 aaPredicted RBP12.56□□□□□ -0.4
SMARCE1-203ENST00000377808 ELF1P32519 619 aa12.56□□□□□ -0.4
SMARCE1-203ENST00000377808 CTXN3Q4LDR2 81 aa12.56□□□□□ -0.4
SMARCE1-203ENST00000377808 ZNF280DQ6N043 979 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms