RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 RNF149Q8NC42 400 aa21.63■■□□□ 1.05
VSX1-202ENST00000376709 TRIM11Q96F44 468 aa21.63■■□□□ 1.05
VSX1-202ENST00000376709 IMPG2Q9BZV3 1241 aa21.63■■□□□ 1.05
VSX1-202ENST00000376709 PLAAQ9Y263 795 aa21.63■■□□□ 1.05
VSX1-202ENST00000376709 PCDHA3Q9Y5H8 950 aa21.63■■□□□ 1.05
VSX1-202ENST00000376709 GAS2O43903 313 aaKnown RBP21.62■■□□□ 1.05
VSX1-202ENST00000376709 MSCO60682 206 aa21.62■■□□□ 1.05
VSX1-202ENST00000376709 PHF2O75151 1096 aa21.62■■□□□ 1.05
VSX1-202ENST00000376709 TBXAS1P24557 533 aaPredicted RBP21.62■■□□□ 1.05
VSX1-202ENST00000376709 MAPK4P31152 587 aa21.62■■□□□ 1.05
VSX1-202ENST00000376709 NCOA4Q13772 614 aa21.62■■□□□ 1.05
VSX1-202ENST00000376709 EXOC8Q8IYI6 725 aa21.62■■□□□ 1.05
VSX1-202ENST00000376709 ATP8B4Q8TF62 1192 aa21.62■■□□□ 1.05
VSX1-202ENST00000376709 SCN4AP35499 1836 aa21.62■■□□□ 1.05
VSX1-202ENST00000376709 LGR5O75473 907 aa21.61■■□□□ 1.05
VSX1-202ENST00000376709 CLTAP09496 248 aa21.61■■□□□ 1.05
VSX1-202ENST00000376709 MYBL1P10243 752 aa21.61■■□□□ 1.05
VSX1-202ENST00000376709 ACO1P21399 889 aaKnown RBP21.61■■□□□ 1.05
VSX1-202ENST00000376709 CTNNA2P26232 953 aa21.61■■□□□ 1.05
VSX1-202ENST00000376709 HSD17B3P37058 310 aa21.61■■□□□ 1.05
VSX1-202ENST00000376709 RWDD2BP57060 319 aa21.61■■□□□ 1.05
VSX1-202ENST00000376709 MAPK6Q16659 721 aa21.61■■□□□ 1.05
VSX1-202ENST00000376709 PLPPR4Q7Z2D5 763 aa21.61■■□□□ 1.05
VSX1-202ENST00000376709 C18orf8Q96DM3 657 aa21.61■■□□□ 1.05
VSX1-202ENST00000376709 RASAL2Q9UJF2 1139 aa21.61■■□□□ 1.05
VSX1-202ENST00000376709 PRKCBP05771 671 aa21.61■■□□□ 1.05
VSX1-202ENST00000376709 GNA15P30679 374 aa21.61■■□□□ 1.05
VSX1-202ENST00000376709 CHRNA3P32297 505 aa21.61■■□□□ 1.05
VSX1-202ENST00000376709 TNFSF9P41273 254 aa21.61■■□□□ 1.05
VSX1-202ENST00000376709 CDCA2Q69YH5 1023 aaPredicted RBP21.61■■□□□ 1.05
VSX1-202ENST00000376709 BRSK2Q8IWQ3 736 aa21.61■■□□□ 1.05
VSX1-202ENST00000376709 ERP44Q9BS26 406 aa21.61■■□□□ 1.05
VSX1-202ENST00000376709 CCDC113Q9H0I3 377 aa21.61■■□□□ 1.05
VSX1-202ENST00000376709 MROH8Q9H579 483 aa21.61■■□□□ 1.05
VSX1-202ENST00000376709 EFCC1Q9HA90 598 aa21.61■■□□□ 1.05
VSX1-202ENST00000376709 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.61■■□□□ 1.05
VSX1-202ENST00000376709 NUB1Q9Y5A7 615 aa21.61■■□□□ 1.05
VSX1-202ENST00000376709 FAM187AA6NFU0 413 aa21.6■■□□□ 1.05
VSX1-202ENST00000376709 RRM1P23921 792 aa21.6■■□□□ 1.05
VSX1-202ENST00000376709 CENPCQ03188 943 aa21.6■■□□□ 1.05
VSX1-202ENST00000376709 MKRN3Q13064 507 aaKnown RBP21.6■■□□□ 1.05
VSX1-202ENST00000376709 MKRN4PQ13434 485 aaPredicted RBP21.6■■□□□ 1.05
VSX1-202ENST00000376709 KCTD16Q68DU8 428 aa21.6■■□□□ 1.05
VSX1-202ENST00000376709 PNMA8AQ86V59 439 aaPredicted RBP21.6■■□□□ 1.05
VSX1-202ENST00000376709 JAMLQ86YT9 394 aa21.6■■□□□ 1.05
VSX1-202ENST00000376709 RHPN2Q8IUC4 686 aa21.6■■□□□ 1.05
VSX1-202ENST00000376709 CD302Q8IX05 232 aa21.6■■□□□ 1.05
VSX1-202ENST00000376709 PRELID2Q8N945 189 aa21.6■■□□□ 1.05
VSX1-202ENST00000376709 MAGOHBQ96A72 148 aaKnown RBP21.6■■□□□ 1.05
VSX1-202ENST00000376709 FAM212AQ96EL1 285 aa21.6■■□□□ 1.05
VSX1-202ENST00000376709 CYFIP2Q96F07 1278 aa21.6■■□□□ 1.05
VSX1-202ENST00000376709 PLVAPQ9BX97 442 aa21.6■■□□□ 1.05
VSX1-202ENST00000376709 AVENQ9NQS1 362 aaPredicted RBP21.6■■□□□ 1.05
VSX1-202ENST00000376709 MTUS1Q9ULD2 1270 aa21.6■■□□□ 1.05
VSX1-202ENST00000376709 ZBTB42B2RXF5 422 aa21.6■■□□□ 1.05
VSX1-202ENST00000376709 TXNP10599 105 aaKnown RBP21.6■■□□□ 1.05
VSX1-202ENST00000376709 PLCB4Q15147 1175 aa21.6■■□□□ 1.05
VSX1-202ENST00000376709 PHLDB2Q86SQ0 1253 aa21.6■■□□□ 1.05
VSX1-202ENST00000376709 WDR49Q8IV35 697 aa21.6■■□□□ 1.05
VSX1-202ENST00000376709 PASD1Q8IV76 773 aa21.6■■□□□ 1.05
VSX1-202ENST00000376709 RBBP8NLQ8NC74 664 aaPredicted RBP21.6■■□□□ 1.05
VSX1-202ENST00000376709 ACO2Q99798 780 aaKnown RBP21.6■■□□□ 1.05
VSX1-202ENST00000376709 UMODL1Q5DID0 1318 aa21.59■■□□□ 1.05
VSX1-202ENST00000376709 GOLGA6L10A6NI86 522 aa21.59■■□□□ 1.05
VSX1-202ENST00000376709 CYP1A1P04798 512 aaPredicted RBP21.59■■□□□ 1.05
VSX1-202ENST00000376709 FLT3P36888 993 aa21.59■■□□□ 1.05
VSX1-202ENST00000376709 AP3M2P53677 418 aa21.59■■□□□ 1.05
VSX1-202ENST00000376709 MTMR3Q13615 1198 aa21.59■■□□□ 1.05
VSX1-202ENST00000376709 C2CD6Q53TS8 623 aa21.59■■□□□ 1.05
VSX1-202ENST00000376709 DNAJC21Q5F1R6 531 aaKnown RBP21.59■■□□□ 1.05
VSX1-202ENST00000376709 CEP85LQ5SZL2 805 aa21.59■■□□□ 1.05
VSX1-202ENST00000376709 UBLCP1Q8WVY7 318 aaPredicted RBP21.59■■□□□ 1.05
VSX1-202ENST00000376709 COPS5Q92905 334 aa21.59■■□□□ 1.05
VSX1-202ENST00000376709 C2orf40Q9H1Z8 148 aa21.59■■□□□ 1.05
VSX1-202ENST00000376709 FAM189A1O60320 539 aa21.58■■□□□ 1.05
VSX1-202ENST00000376709 TMEM63BQ5T3F8 832 aa21.58■■□□□ 1.05
VSX1-202ENST00000376709 DUPD1Q68J44 220 aa21.58■■□□□ 1.05
VSX1-202ENST00000376709 TRIM72Q6ZMU5 477 aa21.58■■□□□ 1.05
VSX1-202ENST00000376709 SLC13A5Q86YT5 568 aaPredicted RBP21.58■■□□□ 1.05
VSX1-202ENST00000376709 FMO2Q99518 471 aa21.58■■□□□ 1.05
VSX1-202ENST00000376709 JPH2Q9BR39 696 aaPredicted RBP21.58■■□□□ 1.05
VSX1-202ENST00000376709 MROH7Q68CQ1 1323 aa21.58■■□□□ 1.05
VSX1-202ENST00000376709 IGKV6-21A0A0C4DH24 114 aa21.58■■□□□ 1.04
VSX1-202ENST00000376709 MYO1FO00160 1098 aa21.58■■□□□ 1.04
VSX1-202ENST00000376709 OGTO15294 1046 aa21.58■■□□□ 1.04
VSX1-202ENST00000376709 THAP12O43422 761 aa21.58■■□□□ 1.04
VSX1-202ENST00000376709 ERLIN2O94905 339 aa21.58■■□□□ 1.04
VSX1-202ENST00000376709 CCDC62Q6P9F0 684 aa21.58■■□□□ 1.04
VSX1-202ENST00000376709 CCDC137Q6PK04 289 aaKnown RBP21.58■■□□□ 1.04
VSX1-202ENST00000376709 MON1BQ7L1V2 547 aa21.58■■□□□ 1.04
VSX1-202ENST00000376709 TMC3Q7Z5M5 1100 aa21.58■■□□□ 1.04
VSX1-202ENST00000376709 ABRAQ8N0Z2 381 aa21.58■■□□□ 1.04
VSX1-202ENST00000376709 SH2D3CQ8N5H7 860 aa21.58■■□□□ 1.04
VSX1-202ENST00000376709 TRAPPC12Q8WVT3 735 aa21.58■■□□□ 1.04
VSX1-202ENST00000376709 NLRP4Q96MN2 994 aa21.58■■□□□ 1.04
VSX1-202ENST00000376709 TRIM7Q9C029 511 aa21.58■■□□□ 1.04
VSX1-202ENST00000376709 MTMR12Q9C0I1 747 aa21.58■■□□□ 1.04
VSX1-202ENST00000376709 SMARCAD1Q9H4L7 1026 aa21.58■■□□□ 1.04
VSX1-202ENST00000376709 PNMA3Q9UL41 463 aa21.58■■□□□ 1.04
VSX1-202ENST00000376709 SSTR3P32745 418 aaPredicted RBP21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms