RNA–Protein interactions for RNA: ENST00000376061.8

PDPN-203, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-203ENST00000376061 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.28□□□□□ -0.6
PDPN-203ENST00000376061 CNTN3Q9P232 1028 aa11.28□□□□□ -0.6
PDPN-203ENST00000376061 PYCARDQ9ULZ3 195 aa11.28□□□□□ -0.6
PDPN-203ENST00000376061 C2CD2Q9Y426 696 aa11.28□□□□□ -0.6
PDPN-203ENST00000376061 DAAM1Q9Y4D1 1078 aa11.28□□□□□ -0.6
PDPN-203ENST00000376061 TET1Q8NFU7 2136 aa11.28□□□□□ -0.6
PDPN-203ENST00000376061 TDRD15B5MCY1 1934 aaKnown RBP11.28□□□□□ -0.6
PDPN-203ENST00000376061 MICAL3Q7RTP6 2002 aa11.28□□□□□ -0.6
PDPN-203ENST00000376061 F8VZ95 297 aa11.28□□□□□ -0.6
PDPN-203ENST00000376061 SNPHO15079 494 aa11.28□□□□□ -0.6
PDPN-203ENST00000376061 NBNO60934 754 aa11.28□□□□□ -0.6
PDPN-203ENST00000376061 ZC3H11AO75152 810 aaKnown RBP eCLIP11.28□□□□□ -0.6
PDPN-203ENST00000376061 PHACTR2O75167 634 aa11.28□□□□□ -0.6
PDPN-203ENST00000376061 ATF7P17544 494 aaPredicted RBP11.28□□□□□ -0.6
PDPN-203ENST00000376061 AKAP5P24588 427 aa11.28□□□□□ -0.6
PDPN-203ENST00000376061 HNRNPH3P31942 346 aaKnown RBP11.28□□□□□ -0.6
PDPN-203ENST00000376061 RAB27AP51159 221 aa11.28□□□□□ -0.6
PDPN-203ENST00000376061 NCOA4Q13772 614 aa11.28□□□□□ -0.6
PDPN-203ENST00000376061 RAPGEF1Q13905 1077 aa11.28□□□□□ -0.6
PDPN-203ENST00000376061 GPNMBQ14956 572 aa11.28□□□□□ -0.6
PDPN-203ENST00000376061 LRRC26Q2I0M4 334 aa11.28□□□□□ -0.6
PDPN-203ENST00000376061 XKR4Q5GH76 650 aa11.28□□□□□ -0.6
PDPN-203ENST00000376061 WDR59Q6PJI9 974 aa11.28□□□□□ -0.6
PDPN-203ENST00000376061 ALKAL1Q6UXT8 129 aa11.28□□□□□ -0.6
PDPN-203ENST00000376061 NT5DC4Q86YG4 428 aa11.28□□□□□ -0.6
PDPN-203ENST00000376061 GPIHBP1Q8IV16 184 aa11.28□□□□□ -0.6
PDPN-203ENST00000376061 CD302Q8IX05 232 aa11.28□□□□□ -0.6
PDPN-203ENST00000376061 TMEM130Q8N3G9 435 aa11.28□□□□□ -0.6
PDPN-203ENST00000376061 C1orf127Q8N9H9 656 aa11.28□□□□□ -0.6
PDPN-203ENST00000376061 LINC01599Q8WXQ3 324 aa11.28□□□□□ -0.6
PDPN-203ENST00000376061 MARVELD3Q96A59 401 aa11.28□□□□□ -0.6
PDPN-203ENST00000376061 ELMO3Q96BJ8 720 aa11.28□□□□□ -0.6
PDPN-203ENST00000376061 ZMAT2Q96NC0 199 aaKnown RBP11.28□□□□□ -0.6
PDPN-203ENST00000376061 ADAM2Q99965 735 aa11.28□□□□□ -0.6
PDPN-203ENST00000376061 TRAIPQ9BWF2 469 aa11.28□□□□□ -0.6
PDPN-203ENST00000376061 IFIH1Q9BYX4 1025 aaKnown RBP11.28□□□□□ -0.6
PDPN-203ENST00000376061 NUCKS1Q9H1E3 243 aaKnown RBP11.28□□□□□ -0.6
PDPN-203ENST00000376061 WNT8AQ9H1J5 351 aa11.28□□□□□ -0.6
PDPN-203ENST00000376061 HIPK3Q9H422 1215 aa11.28□□□□□ -0.6
PDPN-203ENST00000376061 C1orf112Q9NSG2 853 aa11.28□□□□□ -0.6
PDPN-203ENST00000376061 SIX4Q9UIU6 781 aa11.28□□□□□ -0.6
PDPN-203ENST00000376061 DNAJC12Q9UKB3 198 aa11.28□□□□□ -0.6
PDPN-203ENST00000376061 TBX21Q9UL17 535 aa11.28□□□□□ -0.6
PDPN-203ENST00000376061 MYO6Q9UM54 1294 aa11.28□□□□□ -0.6
PDPN-203ENST00000376061 ATP11BQ9Y2G3 1177 aa11.28□□□□□ -0.6
PDPN-203ENST00000376061 DERAQ9Y315 318 aa11.28□□□□□ -0.6
PDPN-203ENST00000376061 LTBP2Q14767 1821 aa11.27□□□□□ -0.6
PDPN-203ENST00000376061 SCN1AP35498 2009 aa11.27□□□□□ -0.61
PDPN-203ENST00000376061 SOWAHDA6NJG2 315 aa11.27□□□□□ -0.61
PDPN-203ENST00000376061 MEIS3P2A8K0S8 358 aa11.27□□□□□ -0.61
PDPN-203ENST00000376061 NRDCO43847 1150 aa11.27□□□□□ -0.61
PDPN-203ENST00000376061 ASS1P00966 412 aaKnown RBP11.27□□□□□ -0.61
PDPN-203ENST00000376061 PNMA6AP0CW24 399 aaPredicted RBP11.27□□□□□ -0.61
PDPN-203ENST00000376061 ZSCAN20P17040 1043 aaPredicted RBP11.27□□□□□ -0.61
PDPN-203ENST00000376061 CAPN2P17655 700 aa11.27□□□□□ -0.61
PDPN-203ENST00000376061 GUCY2FP51841 1108 aa11.27□□□□□ -0.61
PDPN-203ENST00000376061 NOP14P78316 857 aaKnown RBP11.27□□□□□ -0.61
PDPN-203ENST00000376061 GLRA4Q5JXX5 417 aa11.27□□□□□ -0.61
PDPN-203ENST00000376061 SFMBT2Q5VUG0 894 aa11.27□□□□□ -0.61
PDPN-203ENST00000376061 SPOPLQ6IQ16 392 aa11.27□□□□□ -0.61
PDPN-203ENST00000376061 ZSCAN30Q86W11 494 aa11.27□□□□□ -0.61
PDPN-203ENST00000376061 HACE1Q8IYU2 909 aa11.27□□□□□ -0.61
PDPN-203ENST00000376061 PPM1KQ8N3J5 372 aa11.27□□□□□ -0.61
PDPN-203ENST00000376061 CXorf38Q8TB03 319 aa11.27□□□□□ -0.61
PDPN-203ENST00000376061 HELQQ8TDG4 1101 aa11.27□□□□□ -0.61
PDPN-203ENST00000376061 SYN2Q92777 582 aaPredicted RBP11.27□□□□□ -0.61
PDPN-203ENST00000376061 KAT5Q92993 513 aa11.27□□□□□ -0.61
PDPN-203ENST00000376061 KREMEN1Q96MU8 473 aa11.27□□□□□ -0.61
PDPN-203ENST00000376061 SPAG5Q96R06 1193 aa11.27□□□□□ -0.61
PDPN-203ENST00000376061 STK33Q9BYT3 514 aa11.27□□□□□ -0.61
PDPN-203ENST00000376061 GPR88Q9GZN0 384 aa11.27□□□□□ -0.61
PDPN-203ENST00000376061 XYLT2Q9H1B5 865 aa11.27□□□□□ -0.61
PDPN-203ENST00000376061 APOBEC3GQ9HC16 384 aaKnown RBP11.27□□□□□ -0.61
PDPN-203ENST00000376061 KLK14Q9P0G3 267 aa11.27□□□□□ -0.61
PDPN-203ENST00000376061 TUBGCP4Q9UGJ1 667 aa11.27□□□□□ -0.61
PDPN-203ENST00000376061 PARP2Q9UGN5 583 aa11.27□□□□□ -0.61
PDPN-203ENST00000376061 PLAGL2Q9UPG8 496 aa11.27□□□□□ -0.61
PDPN-203ENST00000376061 A0A0U1RQF3 1178 aa11.26□□□□□ -0.61
PDPN-203ENST00000376061 ARHGAP6O43182 974 aa11.26□□□□□ -0.61
PDPN-203ENST00000376061 ZNF623O75123 536 aa11.26□□□□□ -0.61
PDPN-203ENST00000376061 ITGB3P05106 788 aa11.26□□□□□ -0.61
PDPN-203ENST00000376061 ITGA4P13612 1032 aa11.26□□□□□ -0.61
PDPN-203ENST00000376061 KCNE1P15382 129 aa11.26□□□□□ -0.61
PDPN-203ENST00000376061 MYL6P60660 151 aa11.26□□□□□ -0.61
PDPN-203ENST00000376061 MTF1Q14872 753 aa11.26□□□□□ -0.61
PDPN-203ENST00000376061 DRAP1Q14919 205 aaPredicted RBP11.26□□□□□ -0.61
PDPN-203ENST00000376061 ZBTB6Q15916 424 aa11.26□□□□□ -0.61
PDPN-203ENST00000376061 ASIC2Q16515 512 aa11.26□□□□□ -0.61
PDPN-203ENST00000376061 ARHGAP44Q17R89 818 aa11.26□□□□□ -0.61
PDPN-203ENST00000376061 TSR1Q2NL82 804 aaKnown RBP11.26□□□□□ -0.61
PDPN-203ENST00000376061 PLEKHG4Q58EX7 1191 aa11.26□□□□□ -0.61
PDPN-203ENST00000376061 CYP26C1Q6V0L0 522 aa11.26□□□□□ -0.61
PDPN-203ENST00000376061 RAD9BQ6WBX8 426 aa11.26□□□□□ -0.61
PDPN-203ENST00000376061 NECAB2Q7Z6G3 386 aa11.26□□□□□ -0.61
PDPN-203ENST00000376061 MRPL10Q7Z7H8 261 aaKnown RBP11.26□□□□□ -0.61
PDPN-203ENST00000376061 LPPQ93052 612 aa11.26□□□□□ -0.61
PDPN-203ENST00000376061 TATDN2Q93075 761 aa11.26□□□□□ -0.61
PDPN-203ENST00000376061 C18orf25Q96B23 403 aaPredicted RBP11.26□□□□□ -0.61
PDPN-203ENST00000376061 ZFP42Q96MM3 310 aa11.26□□□□□ -0.61
PDPN-203ENST00000376061 CHP1Q99653 195 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms