RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 KIAA1683Q9H0B3 1180 aa15.5■□□□□ 0.07
MSH5-201ENST00000375703 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.5■□□□□ 0.07
MSH5-201ENST00000375703 TPX2Q9ULW0 747 aaKnown RBP15.5■□□□□ 0.07
MSH5-201ENST00000375703 R3HDM2Q9Y2K5 976 aaKnown RBP15.5■□□□□ 0.07
MSH5-201ENST00000375703 ADGRA3Q8IWK6 1321 aa15.5■□□□□ 0.07
MSH5-201ENST00000375703 TCP11X1B4DZS4 312 aa15.5■□□□□ 0.07
MSH5-201ENST00000375703 ZNF862O60290 1169 aa15.5■□□□□ 0.07
MSH5-201ENST00000375703 ZBED4O75132 1171 aa15.5■□□□□ 0.07
MSH5-201ENST00000375703 NBPF9Q3BBW0 867 aa15.5■□□□□ 0.07
MSH5-201ENST00000375703 DAB2IPQ5VWQ8 1189 aa15.5■□□□□ 0.07
MSH5-201ENST00000375703 MTMR14Q8NCE2 650 aa15.5■□□□□ 0.07
MSH5-201ENST00000375703 CTNNAL1Q9UBT7 734 aa15.5■□□□□ 0.07
MSH5-201ENST00000375703 SLC12A4Q9UP95 1085 aa15.5■□□□□ 0.07
MSH5-201ENST00000375703 CD2APQ9Y5K6 639 aa15.5■□□□□ 0.07
MSH5-201ENST00000375703 PROSCO94903 275 aa15.49■□□□□ 0.07
MSH5-201ENST00000375703 RALAP11233 206 aa15.49■□□□□ 0.07
MSH5-201ENST00000375703 TNNI1P19237 187 aa15.49■□□□□ 0.07
MSH5-201ENST00000375703 CENPCQ03188 943 aa15.49■□□□□ 0.07
MSH5-201ENST00000375703 FAM133BQ5BKY9 247 aaKnown RBP15.49■□□□□ 0.07
MSH5-201ENST00000375703 SWSAP1Q6NVH7 229 aa15.49■□□□□ 0.07
MSH5-201ENST00000375703 HIBCHQ6NVY1 386 aaPredicted RBP15.49■□□□□ 0.07
MSH5-201ENST00000375703 VSTM1Q6UX27 236 aa15.49■□□□□ 0.07
MSH5-201ENST00000375703 C15orf39Q6ZRI6 1047 aa15.49■□□□□ 0.07
MSH5-201ENST00000375703 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.49■□□□□ 0.07
MSH5-201ENST00000375703 RTKN2Q8IZC4 609 aa15.49■□□□□ 0.07
MSH5-201ENST00000375703 ANKRD42Q8N9B4 389 aa15.49■□□□□ 0.07
MSH5-201ENST00000375703 PWWP2AQ96N64 755 aa15.49■□□□□ 0.07
MSH5-201ENST00000375703 FNBP1Q96RU3 617 aa15.49■□□□□ 0.07
MSH5-201ENST00000375703 FOXO6A8MYZ6 492 aa15.49■□□□□ 0.07
MSH5-201ENST00000375703 MGRN1O60291 552 aa15.49■□□□□ 0.07
MSH5-201ENST00000375703 ELF3P78545 371 aaPredicted RBP15.49■□□□□ 0.07
MSH5-201ENST00000375703 ENPEPQ07075 957 aa15.49■□□□□ 0.07
MSH5-201ENST00000375703 BAATQ14032 418 aaPredicted RBP15.49■□□□□ 0.07
MSH5-201ENST00000375703 ZNF365Q70YC5 407 aa15.49■□□□□ 0.07
MSH5-201ENST00000375703 FAM228AQ86W67 206 aa15.49■□□□□ 0.07
MSH5-201ENST00000375703 ATP6V0A1Q93050 837 aa15.49■□□□□ 0.07
MSH5-201ENST00000375703 IFT74Q96LB3 600 aa15.49■□□□□ 0.07
MSH5-201ENST00000375703 SENP7Q9BQF6 1050 aa15.49■□□□□ 0.07
MSH5-201ENST00000375703 WNT10BO00744 389 aa15.48■□□□□ 0.07
MSH5-201ENST00000375703 DGAT1O75907 488 aa15.48■□□□□ 0.07
MSH5-201ENST00000375703 CYP1A1P04798 512 aaPredicted RBP15.48■□□□□ 0.07
MSH5-201ENST00000375703 PTP4A2Q12974 167 aa15.48■□□□□ 0.07
MSH5-201ENST00000375703 CCNG2Q16589 344 aa15.48■□□□□ 0.07
MSH5-201ENST00000375703 LIN9Q5TKA1 542 aa15.48■□□□□ 0.07
MSH5-201ENST00000375703 VSIG10LQ86VR7 867 aa15.48■□□□□ 0.07
MSH5-201ENST00000375703 CCDC63Q8NA47 563 aa15.48■□□□□ 0.07
MSH5-201ENST00000375703 MCPH1Q8NEM0 835 aa15.48■□□□□ 0.07
MSH5-201ENST00000375703 FAM118BQ9BPY3 351 aa15.48■□□□□ 0.07
MSH5-201ENST00000375703 MLXIPLQ9NP71 852 aa15.48■□□□□ 0.07
MSH5-201ENST00000375703 FGFR1OP2Q9NVK5 253 aa15.48■□□□□ 0.07
MSH5-201ENST00000375703 NINJ2Q9NZG7 142 aa15.48■□□□□ 0.07
MSH5-201ENST00000375703 USP15Q9Y4E8 981 aaPredicted RBP15.48■□□□□ 0.07
MSH5-201ENST00000375703 EXTL3O43909 919 aa15.48■□□□□ 0.07
MSH5-201ENST00000375703 SORBS3O60504 671 aa15.48■□□□□ 0.07
MSH5-201ENST00000375703 DKC1O60832 514 aaKnown RBP eCLIP15.48■□□□□ 0.07
MSH5-201ENST00000375703 STBD1O95210 358 aa15.48■□□□□ 0.07
MSH5-201ENST00000375703 HLA-DRAP01903 254 aa15.48■□□□□ 0.07
MSH5-201ENST00000375703 NR3C2P08235 984 aa15.48■□□□□ 0.07
MSH5-201ENST00000375703 BRAFP15056 766 aa15.48■□□□□ 0.07
MSH5-201ENST00000375703 CCND2P30279 289 aa15.48■□□□□ 0.07
MSH5-201ENST00000375703 LIG4P49917 911 aa15.48■□□□□ 0.07
MSH5-201ENST00000375703 GSCP56915 257 aaPredicted RBP15.48■□□□□ 0.07
MSH5-201ENST00000375703 NUGGCQ68CJ6 796 aa15.48■□□□□ 0.07
MSH5-201ENST00000375703 TAS1R3Q7RTX0 852 aa15.48■□□□□ 0.07
MSH5-201ENST00000375703 CEP57Q86XR8 500 aa15.48■□□□□ 0.07
MSH5-201ENST00000375703 RHOT1Q8IXI2 618 aa15.48■□□□□ 0.07
MSH5-201ENST00000375703 NCAPGQ9BPX3 1015 aa15.48■□□□□ 0.07
MSH5-201ENST00000375703 KIAA1586Q9HCI6 787 aa15.48■□□□□ 0.07
MSH5-201ENST00000375703 PDLIM7Q9NR12 457 aa15.48■□□□□ 0.07
MSH5-201ENST00000375703 ABCF3Q9NUQ8 709 aa15.48■□□□□ 0.07
MSH5-201ENST00000375703 O00370 1275 aa15.47■□□□□ 0.07
MSH5-201ENST00000375703 MAFGO15525 162 aa15.47■□□□□ 0.07
MSH5-201ENST00000375703 TCEA3O75764 348 aa15.47■□□□□ 0.07
MSH5-201ENST00000375703 MAP2K2P36507 400 aa15.47■□□□□ 0.07
MSH5-201ENST00000375703 SSR1P43307 286 aaKnown RBP15.47■□□□□ 0.07
MSH5-201ENST00000375703 KLF1Q13351 362 aaPredicted RBP15.47■□□□□ 0.07
MSH5-201ENST00000375703 SPOPLQ6IQ16 392 aa15.47■□□□□ 0.07
MSH5-201ENST00000375703 MON1BQ7L1V2 547 aa15.47■□□□□ 0.07
MSH5-201ENST00000375703 CCDC89Q8N998 374 aa15.47■□□□□ 0.07
MSH5-201ENST00000375703 BBOF1Q8ND07 529 aa15.47■□□□□ 0.07
MSH5-201ENST00000375703 AGBL3Q8NEM8 1001 aa15.47■□□□□ 0.07
MSH5-201ENST00000375703 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.47■□□□□ 0.07
MSH5-201ENST00000375703 C11orf70Q9BRQ4 267 aa15.47■□□□□ 0.07
MSH5-201ENST00000375703 ADAM22Q9P0K1 906 aa15.47■□□□□ 0.07
MSH5-201ENST00000375703 TBK1Q9UHD2 729 aa15.47■□□□□ 0.07
MSH5-201ENST00000375703 C4BPAP04003 597 aaKnown RBP15.47■□□□□ 0.07
MSH5-201ENST00000375703 PSAPP07602 524 aa15.47■□□□□ 0.07
MSH5-201ENST00000375703 CFHP08603 1231 aa15.47■□□□□ 0.07
MSH5-201ENST00000375703 PIK3CAP42336 1068 aa15.47■□□□□ 0.07
MSH5-201ENST00000375703 TAS2R40P59535 323 aa15.47■□□□□ 0.07
MSH5-201ENST00000375703 SP4Q02446 784 aa15.47■□□□□ 0.07
MSH5-201ENST00000375703 ZACNQ401N2 412 aa15.47■□□□□ 0.07
MSH5-201ENST00000375703 XRRA1Q6P2D8 792 aa15.47■□□□□ 0.07
MSH5-201ENST00000375703 PASD1Q8IV76 773 aa15.47■□□□□ 0.07
MSH5-201ENST00000375703 CYP4X1Q8N118 509 aa15.47■□□□□ 0.07
MSH5-201ENST00000375703 TTLL6Q8N841 843 aa15.47■□□□□ 0.07
MSH5-201ENST00000375703 GDAP1Q8TB36 358 aa15.47■□□□□ 0.07
MSH5-201ENST00000375703 MAGEC3Q8TD91 643 aa15.47■□□□□ 0.07
MSH5-201ENST00000375703 CKAP2Q8WWK9 683 aa15.47■□□□□ 0.07
MSH5-201ENST00000375703 GPRASP2Q96D09 838 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms