RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 FAM171A1Q5VUB5 890 aa13.35□□□□□ -0.27
LSM2-208ENST00000375661 DCLK2Q8N568 766 aa13.35□□□□□ -0.27
LSM2-208ENST00000375661 SECISBP2LQ93073 1101 aaKnown RBP13.35□□□□□ -0.27
LSM2-208ENST00000375661 NACC1Q96RE7 527 aa13.35□□□□□ -0.27
LSM2-208ENST00000375661 SPATA6Q9NWH7 488 aaPredicted RBP13.35□□□□□ -0.27
LSM2-208ENST00000375661 KLK14Q9P0G3 267 aa13.35□□□□□ -0.27
LSM2-208ENST00000375661 NCDNQ9UBB6 729 aa13.35□□□□□ -0.27
LSM2-208ENST00000375661 B4GALT5O43286 388 aa13.34□□□□□ -0.27
LSM2-208ENST00000375661 SLC26A4O43511 780 aa13.34□□□□□ -0.27
LSM2-208ENST00000375661 LRRN2O75325 713 aa13.34□□□□□ -0.27
LSM2-208ENST00000375661 THP07101 528 aa13.34□□□□□ -0.27
LSM2-208ENST00000375661 RPS9P46781 194 aaKnown RBP13.34□□□□□ -0.27
LSM2-208ENST00000375661 ME1P48163 572 aa13.34□□□□□ -0.27
LSM2-208ENST00000375661 NTHL1P78549 312 aa13.34□□□□□ -0.27
LSM2-208ENST00000375661 RAB33AQ14088 237 aa13.34□□□□□ -0.27
LSM2-208ENST00000375661 UBXN2BQ14CS0 331 aa13.34□□□□□ -0.27
LSM2-208ENST00000375661 KARSQ15046 597 aaKnown RBP13.34□□□□□ -0.27
LSM2-208ENST00000375661 ZBTB41Q5SVQ8 909 aa13.34□□□□□ -0.27
LSM2-208ENST00000375661 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.34□□□□□ -0.27
LSM2-208ENST00000375661 CEP57Q86XR8 500 aa13.34□□□□□ -0.27
LSM2-208ENST00000375661 ZBTB44Q8NCP5 570 aa13.34□□□□□ -0.27
LSM2-208ENST00000375661 ATRIPQ8WXE1 791 aa13.34□□□□□ -0.27
LSM2-208ENST00000375661 NELL1Q92832 810 aa13.34□□□□□ -0.27
LSM2-208ENST00000375661 CLDN23Q96B33 292 aa13.34□□□□□ -0.27
LSM2-208ENST00000375661 PAAF1Q9BRP4 392 aa13.34□□□□□ -0.27
LSM2-208ENST00000375661 FAM126AQ9BYI3 521 aaPredicted RBP13.34□□□□□ -0.27
LSM2-208ENST00000375661 POLR3FQ9H1D9 316 aaPredicted RBP13.34□□□□□ -0.27
LSM2-208ENST00000375661 LTB4R2Q9NPC1 389 aa13.34□□□□□ -0.27
LSM2-208ENST00000375661 ZSCAN32Q9NX65 697 aa13.34□□□□□ -0.27
LSM2-208ENST00000375661 A0A087X0B3 334 aa13.33□□□□□ -0.28
LSM2-208ENST00000375661 CASTOR2A6NHX0 329 aa13.33□□□□□ -0.28
LSM2-208ENST00000375661 FAM170BA6NMN3 283 aa13.33□□□□□ -0.28
LSM2-208ENST00000375661 PRR5-ARHGAP8B1AHC4 643 aa13.33□□□□□ -0.28
LSM2-208ENST00000375661 TMEM189-UBE2V1I3L0A0 370 aa13.33□□□□□ -0.28
LSM2-208ENST00000375661 N4BP3O15049 544 aa13.33□□□□□ -0.28
LSM2-208ENST00000375661 CCL16O15467 120 aa13.33□□□□□ -0.28
LSM2-208ENST00000375661 LILRB5O75023 590 aa13.33□□□□□ -0.28
LSM2-208ENST00000375661 ECI2O75521 394 aa13.33□□□□□ -0.28
LSM2-208ENST00000375661 KIF4AO95239 1232 aa13.33□□□□□ -0.28
LSM2-208ENST00000375661 ARHGAP8P85298 464 aa13.33□□□□□ -0.28
LSM2-208ENST00000375661 RSPO4Q2I0M5 234 aaPredicted RBP13.33□□□□□ -0.28
LSM2-208ENST00000375661 CDCA2Q69YH5 1023 aaPredicted RBP13.33□□□□□ -0.28
LSM2-208ENST00000375661 ADALQ6DHV7 355 aa13.33□□□□□ -0.28
LSM2-208ENST00000375661 CDR2LQ86X02 465 aaPredicted RBP13.33□□□□□ -0.28
LSM2-208ENST00000375661 ZBTB8OSQ8IWT0 167 aa13.33□□□□□ -0.28
LSM2-208ENST00000375661 KCTD17Q8N5Z5 321 aa13.33□□□□□ -0.28
LSM2-208ENST00000375661 MCPH1Q8NEM0 835 aa13.33□□□□□ -0.28
LSM2-208ENST00000375661 ITFG1Q8TB96 612 aa13.33□□□□□ -0.28
LSM2-208ENST00000375661 HASPINQ8TF76 798 aa13.33□□□□□ -0.28
LSM2-208ENST00000375661 RABGGTAQ92696 567 aa13.33□□□□□ -0.28
LSM2-208ENST00000375661 CALML4Q96GE6 196 aa13.33□□□□□ -0.28
LSM2-208ENST00000375661 C2orf40Q9H1Z8 148 aa13.33□□□□□ -0.28
LSM2-208ENST00000375661 EPC1Q9H2F5 836 aa13.33□□□□□ -0.28
LSM2-208ENST00000375661 FZD8Q9H461 694 aa13.33□□□□□ -0.28
LSM2-208ENST00000375661 AVENQ9NQS1 362 aaPredicted RBP13.33□□□□□ -0.28
LSM2-208ENST00000375661 BLOC1S4Q9NUP1 217 aa13.33□□□□□ -0.28
LSM2-208ENST00000375661 POLIQ9UNA4 740 aa13.33□□□□□ -0.28
LSM2-208ENST00000375661 DNM3Q9UQ16 869 aa13.33□□□□□ -0.28
LSM2-208ENST00000375661 MRPS17Q9Y2R5 130 aaKnown RBP13.33□□□□□ -0.28
LSM2-208ENST00000375661 COL4A3Q01955 1670 aa13.33□□□□□ -0.28
LSM2-208ENST00000375661 LRRIQ4A6NIV6 560 aa13.32□□□□□ -0.28
LSM2-208ENST00000375661 PTGESO14684 152 aa13.32□□□□□ -0.28
LSM2-208ENST00000375661 PLCG1P19174 1290 aa13.32□□□□□ -0.28
LSM2-208ENST00000375661 FGFR3P22607 806 aa13.32□□□□□ -0.28
LSM2-208ENST00000375661 LMNB2Q03252 620 aa13.32□□□□□ -0.28
LSM2-208ENST00000375661 CSTF1Q05048 431 aaKnown RBP13.32□□□□□ -0.28
LSM2-208ENST00000375661 NAB2Q15742 525 aa13.32□□□□□ -0.28
LSM2-208ENST00000375661 PABPC1LQ4VXU2 614 aaKnown RBP13.32□□□□□ -0.28
LSM2-208ENST00000375661 RESP18Q5W5W9 173 aa13.32□□□□□ -0.28
LSM2-208ENST00000375661 NPAS3Q8IXF0 933 aa13.32□□□□□ -0.28
LSM2-208ENST00000375661 SLC7A14Q8TBB6 771 aa13.32□□□□□ -0.28
LSM2-208ENST00000375661 CDK5RAP3Q96JB5 506 aa13.32□□□□□ -0.28
LSM2-208ENST00000375661 ADPGKQ9BRR6 497 aa13.32□□□□□ -0.28
LSM2-208ENST00000375661 IER2Q9BTL4 223 aa13.32□□□□□ -0.28
LSM2-208ENST00000375661 PANK2Q9BZ23 570 aa13.32□□□□□ -0.28
LSM2-208ENST00000375661 BHMT2Q9H2M3 363 aa13.32□□□□□ -0.28
LSM2-208ENST00000375661 GDE1Q9NZC3 331 aa13.32□□□□□ -0.28
LSM2-208ENST00000375661 DNMT3BQ9UBC3 853 aaKnown RBP13.32□□□□□ -0.28
LSM2-208ENST00000375661 MTRRQ9UBK8 725 aa13.32□□□□□ -0.28
LSM2-208ENST00000375661 MTF2Q9Y483 593 aaPredicted RBP13.32□□□□□ -0.28
LSM2-208ENST00000375661 CEP250Q9BV73 2442 aa13.32□□□□□ -0.28
LSM2-208ENST00000375661 TBC1D4O60343 1298 aa13.31□□□□□ -0.28
LSM2-208ENST00000375661 RECQL4O94761 1208 aa13.31□□□□□ -0.28
LSM2-208ENST00000375661 CMA1P23946 247 aa13.31□□□□□ -0.28
LSM2-208ENST00000375661 SLC12A3P55017 1021 aa13.31□□□□□ -0.28
LSM2-208ENST00000375661 MAPK6Q16659 721 aa13.31□□□□□ -0.28
LSM2-208ENST00000375661 PADI6Q6TGC4 694 aa13.31□□□□□ -0.28
LSM2-208ENST00000375661 ZNF852Q6ZMS4 543 aa13.31□□□□□ -0.28
LSM2-208ENST00000375661 SYT2Q8N9I0 419 aaPredicted RBP13.31□□□□□ -0.28
LSM2-208ENST00000375661 ST13P5Q8NFI4 369 aaPredicted RBP13.31□□□□□ -0.28
LSM2-208ENST00000375661 RAD54LQ92698 747 aa13.31□□□□□ -0.28
LSM2-208ENST00000375661 DNASE1L2Q92874 299 aa13.31□□□□□ -0.28
LSM2-208ENST00000375661 UROC1Q96N76 676 aa13.31□□□□□ -0.28
LSM2-208ENST00000375661 KXD1Q9BQD3 176 aa13.31□□□□□ -0.28
LSM2-208ENST00000375661 PDZD7Q9H5P4 517 aa13.31□□□□□ -0.28
LSM2-208ENST00000375661 PRMT8Q9NR22 394 aaPredicted RBP13.31□□□□□ -0.28
LSM2-208ENST00000375661 SNTG2Q9NY99 539 aa13.31□□□□□ -0.28
LSM2-208ENST00000375661 CACNG4Q9UBN1 327 aa13.31□□□□□ -0.28
LSM2-208ENST00000375661 CCDC39Q9UFE4 941 aa13.31□□□□□ -0.28
LSM2-208ENST00000375661 SMG5Q9UPR3 1016 aaKnown RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms