RNA–Protein interactions for RNA: ENST00000375639.6

C6orf48-204, Transcript of chromosome 6 open reading frame 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C6orf48, Length 712 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf48-204ENST00000375639 WDR49Q8IV35 697 aa19.16■□□□□ 0.66
C6orf48-204ENST00000375639 COLGALT2Q8IYK4 626 aa19.16■□□□□ 0.66
C6orf48-204ENST00000375639 TMEM130Q8N3G9 435 aa19.16■□□□□ 0.66
C6orf48-204ENST00000375639 OR5B17Q8NGF7 314 aa19.16■□□□□ 0.66
C6orf48-204ENST00000375639 ANKRD36BP1Q96IX9 119 aa19.16■□□□□ 0.66
C6orf48-204ENST00000375639 ANP32EQ9BTT0 268 aa19.16■□□□□ 0.66
C6orf48-204ENST00000375639 NKX2-4Q9H2Z4 354 aa19.16■□□□□ 0.66
C6orf48-204ENST00000375639 MMRN2Q9H8L6 949 aa19.16■□□□□ 0.66
C6orf48-204ENST00000375639 GOLGA2P5Q9HBQ8 144 aa19.16■□□□□ 0.66
C6orf48-204ENST00000375639 CBX8Q9HC52 389 aa19.16■□□□□ 0.66
C6orf48-204ENST00000375639 DPP3Q9NY33 737 aa19.16■□□□□ 0.66
C6orf48-204ENST00000375639 CACNG4Q9UBN1 327 aa19.16■□□□□ 0.66
C6orf48-204ENST00000375639 PTPRJQ12913 1337 aa19.16■□□□□ 0.66
C6orf48-204ENST00000375639 GBF1Q92538 1859 aa19.16■□□□□ 0.66
C6orf48-204ENST00000375639 IKBKBO14920 756 aa19.15■□□□□ 0.66
C6orf48-204ENST00000375639 TNNC2P02585 160 aa19.15■□□□□ 0.66
C6orf48-204ENST00000375639 ALDH2P05091 517 aa19.15■□□□□ 0.66
C6orf48-204ENST00000375639 CYP3A5P20815 502 aa19.15■□□□□ 0.66
C6orf48-204ENST00000375639 OR1G1P47890 313 aa19.15■□□□□ 0.66
C6orf48-204ENST00000375639 NCAPHQ15003 741 aa19.15■□□□□ 0.66
C6orf48-204ENST00000375639 DUOXA2Q1HG44 320 aa19.15■□□□□ 0.66
C6orf48-204ENST00000375639 DHX40Q8IX18 779 aaKnown RBP19.15■□□□□ 0.66
C6orf48-204ENST00000375639 RABGGTAQ92696 567 aa19.15■□□□□ 0.66
C6orf48-204ENST00000375639 MTMR12Q9C0I1 747 aa19.15■□□□□ 0.66
C6orf48-204ENST00000375639 AAASQ9NRG9 546 aa19.15■□□□□ 0.66
C6orf48-204ENST00000375639 FAN1Q9Y2M0 1017 aa19.15■□□□□ 0.66
C6orf48-204ENST00000375639 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.15■□□□□ 0.66
C6orf48-204ENST00000375639 PDCD11Q14690 1871 aaKnown RBP19.14■□□□□ 0.65
C6orf48-204ENST00000375639 ARHGEF15O94989 841 aa19.14■□□□□ 0.65
C6orf48-204ENST00000375639 LAG3P18627 525 aa19.14■□□□□ 0.65
C6orf48-204ENST00000375639 DNAJB2P25686 324 aa19.14■□□□□ 0.65
C6orf48-204ENST00000375639 PBX3P40426 434 aa19.14■□□□□ 0.65
C6orf48-204ENST00000375639 MTIF2P46199 727 aaKnown RBP19.14■□□□□ 0.65
C6orf48-204ENST00000375639 SLC11A1P49279 550 aa19.14■□□□□ 0.65
C6orf48-204ENST00000375639 ALDH7A1P49419 539 aaKnown RBP19.14■□□□□ 0.65
C6orf48-204ENST00000375639 AP3M2P53677 418 aa19.14■□□□□ 0.65
C6orf48-204ENST00000375639 MARSP56192 900 aaKnown RBP19.14■□□□□ 0.65
C6orf48-204ENST00000375639 BCAR1P56945 870 aa19.14■□□□□ 0.65
C6orf48-204ENST00000375639 ENPEPQ07075 957 aa19.14■□□□□ 0.65
C6orf48-204ENST00000375639 IQCB1Q15051 598 aa19.14■□□□□ 0.65
C6orf48-204ENST00000375639 C1orf220Q5T0J3 134 aa19.14■□□□□ 0.65
C6orf48-204ENST00000375639 KCNT2Q6UVM3 1135 aa19.14■□□□□ 0.65
C6orf48-204ENST00000375639 LUZP1Q86V48 1076 aa19.14■□□□□ 0.65
C6orf48-204ENST00000375639 FAM200AQ8TCP9 573 aa19.14■□□□□ 0.65
C6orf48-204ENST00000375639 ZNF516Q92618 1163 aa19.14■□□□□ 0.65
C6orf48-204ENST00000375639 ZNF558Q96NG5 402 aa19.14■□□□□ 0.65
C6orf48-204ENST00000375639 TMEM175Q9BSA9 504 aa19.14■□□□□ 0.65
C6orf48-204ENST00000375639 SLC28A3Q9HAS3 691 aa19.14■□□□□ 0.65
C6orf48-204ENST00000375639 PRG3Q9Y2Y8 225 aaPredicted RBP19.14■□□□□ 0.65
C6orf48-204ENST00000375639 KCNJ18B7U540 433 aa19.13■□□□□ 0.65
C6orf48-204ENST00000375639 NT5C1B-RDH14C9J2C7 533 aa19.13■□□□□ 0.65
C6orf48-204ENST00000375639 NRP1O14786 923 aa19.13■□□□□ 0.65
C6orf48-204ENST00000375639 PHACTR2O75167 634 aa19.13■□□□□ 0.65
C6orf48-204ENST00000375639 GALTP07902 379 aa19.13■□□□□ 0.65
C6orf48-204ENST00000375639 CDK11BP21127 795 aaKnown RBP19.13■□□□□ 0.65
C6orf48-204ENST00000375639 RPL9P32969 192 aaKnown RBP19.13■□□□□ 0.65
C6orf48-204ENST00000375639 GCLMP48507 274 aa19.13■□□□□ 0.65
C6orf48-204ENST00000375639 CLCNKBP51801 687 aa19.13■□□□□ 0.65
C6orf48-204ENST00000375639 CLDN10P78369 228 aa19.13■□□□□ 0.65
C6orf48-204ENST00000375639 PPP3CAQ08209 521 aa19.13■□□□□ 0.65
C6orf48-204ENST00000375639 BIRC3Q13489 604 aa19.13■□□□□ 0.65
C6orf48-204ENST00000375639 KCNJ12Q14500 433 aa19.13■□□□□ 0.65
C6orf48-204ENST00000375639 PPP2R2DQ66LE6 453 aa19.13■□□□□ 0.65
C6orf48-204ENST00000375639 TRIM59Q8IWR1 403 aa19.13■□□□□ 0.65
C6orf48-204ENST00000375639 COLGALT1Q8NBJ5 622 aa19.13■□□□□ 0.65
C6orf48-204ENST00000375639 CLP1Q92989 425 aaKnown RBP19.13■□□□□ 0.65
C6orf48-204ENST00000375639 TIFAQ96CG3 184 aa19.13■□□□□ 0.65
C6orf48-204ENST00000375639 DDX27Q96GQ7 796 aaKnown RBP19.13■□□□□ 0.65
C6orf48-204ENST00000375639 UROC1Q96N76 676 aa19.13■□□□□ 0.65
C6orf48-204ENST00000375639 PAAF1Q9BRP4 392 aa19.13■□□□□ 0.65
C6orf48-204ENST00000375639 R3HCC1Q9Y3T6 440 aaKnown RBP19.13■□□□□ 0.65
C6orf48-204ENST00000375639 PCDHB12Q9Y5F1 795 aa19.13■□□□□ 0.65
C6orf48-204ENST00000375639 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.13■□□□□ 0.657e-58■■■■□ 26
C6orf48-204ENST00000375639 TTC28Q96AY4 2481 aa19.13■□□□□ 0.65
C6orf48-204ENST00000375639 GOLGA6L19H0YKK7 550 aa19.12■□□□□ 0.65
C6orf48-204ENST00000375639 PODXLO00592 558 aa19.12■□□□□ 0.65
C6orf48-204ENST00000375639 STX10O60499 249 aa19.12■□□□□ 0.65
C6orf48-204ENST00000375639 ITGB3P05106 788 aa19.12■□□□□ 0.65
C6orf48-204ENST00000375639 KRT19P08727 400 aa19.12■□□□□ 0.65
C6orf48-204ENST00000375639 CTNNB1P35222 781 aa19.12■□□□□ 0.65
C6orf48-204ENST00000375639 TPM4P67936 248 aa19.12■□□□□ 0.65
C6orf48-204ENST00000375639 TAP1Q03518 808 aa19.12■□□□□ 0.65
C6orf48-204ENST00000375639 CDKAL1Q5VV42 579 aa19.12■□□□□ 0.65
C6orf48-204ENST00000375639 TRAPPC11Q7Z392 1133 aa19.12■□□□□ 0.65
C6orf48-204ENST00000375639 C1orf127Q8N9H9 656 aa19.12■□□□□ 0.65
C6orf48-204ENST00000375639 SLC35C1Q96A29 364 aa19.12■□□□□ 0.65
C6orf48-204ENST00000375639 C17orf80Q9BSJ5 609 aa19.12■□□□□ 0.65
C6orf48-204ENST00000375639 COLEC11Q9BWP8 271 aa19.12■□□□□ 0.65
C6orf48-204ENST00000375639 MTUS1Q9ULD2 1270 aa19.12■□□□□ 0.65
C6orf48-204ENST00000375639 RWDD3Q9Y3V2 267 aa19.12■□□□□ 0.65
C6orf48-204ENST00000375639 C4BPAP04003 597 aaKnown RBP19.11■□□□□ 0.65
C6orf48-204ENST00000375639 LINC00271P0C7V0 271 aa19.11■□□□□ 0.65
C6orf48-204ENST00000375639 EEF1GP26641 437 aaKnown RBP19.11■□□□□ 0.65
C6orf48-204ENST00000375639 LRPAP1P30533 357 aa19.11■□□□□ 0.65
C6orf48-204ENST00000375639 POLR2BP30876 1174 aaKnown RBP19.11■□□□□ 0.65
C6orf48-204ENST00000375639 GTF2H1P32780 548 aa19.11■□□□□ 0.65
C6orf48-204ENST00000375639 BMPR1AP36894 532 aa19.11■□□□□ 0.65
C6orf48-204ENST00000375639 MCCD1P59942 119 aaPredicted RBP19.11■□□□□ 0.65
C6orf48-204ENST00000375639 UPP1Q16831 310 aa19.11■□□□□ 0.65
C6orf48-204ENST00000375639 TCP11X2Q5H9J9 407 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms