RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 NDC80O14777 642 aa13.07□□□□□ -0.32
UBR4-203ENST00000375225 GAS2O43903 313 aaKnown RBP13.07□□□□□ -0.32
UBR4-203ENST00000375225 ZNF862O60290 1169 aa13.07□□□□□ -0.32
UBR4-203ENST00000375225 ECEL1O95672 775 aa13.07□□□□□ -0.32
UBR4-203ENST00000375225 NUDT17P0C025 328 aa13.07□□□□□ -0.32
UBR4-203ENST00000375225 TNNI1P19237 187 aa13.07□□□□□ -0.32
UBR4-203ENST00000375225 LSP1P33241 339 aa13.07□□□□□ -0.32
UBR4-203ENST00000375225 CCT5P48643 541 aa13.07□□□□□ -0.32
UBR4-203ENST00000375225 PEX5P50542 639 aa13.07□□□□□ -0.32
UBR4-203ENST00000375225 ATP1A2P50993 1020 aa13.07□□□□□ -0.32
UBR4-203ENST00000375225 ALDH5A1P51649 535 aaPredicted RBP13.07□□□□□ -0.32
UBR4-203ENST00000375225 CORO7P57737 925 aa13.07□□□□□ -0.32
UBR4-203ENST00000375225 PPP2R2AP63151 447 aa13.07□□□□□ -0.32
UBR4-203ENST00000375225 CLDN10P78369 228 aa13.07□□□□□ -0.32
UBR4-203ENST00000375225 ADCY2Q08462 1091 aa13.07□□□□□ -0.32
UBR4-203ENST00000375225 ZNF844Q08AG5 666 aa13.07□□□□□ -0.32
UBR4-203ENST00000375225 PDCLQ13371 301 aa13.07□□□□□ -0.32
UBR4-203ENST00000375225 ZNF211Q13398 564 aaPredicted RBP13.07□□□□□ -0.32
UBR4-203ENST00000375225 SURF1Q15526 300 aa13.07□□□□□ -0.32
UBR4-203ENST00000375225 MTERF2Q49AM1 385 aa13.07□□□□□ -0.32
UBR4-203ENST00000375225 WDR78Q5VTH9 848 aa13.07□□□□□ -0.32
UBR4-203ENST00000375225 RGMBQ6NW40 437 aa13.07□□□□□ -0.32
UBR4-203ENST00000375225 CCDC137Q6PK04 289 aaKnown RBP13.07□□□□□ -0.32
UBR4-203ENST00000375225 TRMT1LQ7Z2T5 733 aaKnown RBP13.07□□□□□ -0.32
UBR4-203ENST00000375225 DDX42Q86XP3 938 aaKnown RBP eCLIP13.07□□□□□ -0.32
UBR4-203ENST00000375225 PALB2Q86YC2 1186 aa13.07□□□□□ -0.32
UBR4-203ENST00000375225 RASAL3Q86YV0 1011 aa13.07□□□□□ -0.32
UBR4-203ENST00000375225 PSPC1Q8WXF1 523 aaKnown RBP13.07□□□□□ -0.32
UBR4-203ENST00000375225 ALG3Q92685 438 aa13.07□□□□□ -0.32
UBR4-203ENST00000375225 CD101Q93033 1021 aa13.07□□□□□ -0.32
UBR4-203ENST00000375225 FAM167AQ96KS9 214 aa13.07□□□□□ -0.32
UBR4-203ENST00000375225 PCDHB18PQ96TA0 734 aa13.07□□□□□ -0.32
UBR4-203ENST00000375225 KIFC3Q9BVG8 833 aa13.07□□□□□ -0.32
UBR4-203ENST00000375225 CELF4Q9BZC1 486 aaKnown RBP13.07□□□□□ -0.32
UBR4-203ENST00000375225 TMEM134Q9H6X4 195 aa13.07□□□□□ -0.32
UBR4-203ENST00000375225 BCCIPQ9P287 314 aaKnown RBP eCLIP13.07□□□□□ -0.32
UBR4-203ENST00000375225 AGO2Q9UKV8 859 aaKnown RBP13.07□□□□□ -0.32
UBR4-203ENST00000375225 STYXL1Q9Y6J8 313 aa13.07□□□□□ -0.32
UBR4-203ENST00000375225 PLXNB2O15031 1838 aa13.07□□□□□ -0.32
UBR4-203ENST00000375225 GRIN2DO15399 1336 aa13.07□□□□□ -0.32
UBR4-203ENST00000375225 A0A087WUV0 522 aaPredicted RBP13.06□□□□□ -0.32
UBR4-203ENST00000375225 H0YGN5 161 aa13.06□□□□□ -0.32
UBR4-203ENST00000375225 MYO1FO00160 1098 aa13.06□□□□□ -0.32
UBR4-203ENST00000375225 PEX10O60683 326 aa13.06□□□□□ -0.32
UBR4-203ENST00000375225 STBD1O95210 358 aa13.06□□□□□ -0.32
UBR4-203ENST00000375225 ATG7O95352 703 aa13.06□□□□□ -0.32
UBR4-203ENST00000375225 ATP5DP30049 168 aa13.06□□□□□ -0.32
UBR4-203ENST00000375225 COILP38432 576 aaPredicted RBP13.06□□□□□ -0.32
UBR4-203ENST00000375225 NEDD9Q14511 834 aa13.06□□□□□ -0.32
UBR4-203ENST00000375225 UAP1Q16222 522 aaPredicted RBP13.06□□□□□ -0.32
UBR4-203ENST00000375225 PTGISQ16647 500 aa13.06□□□□□ -0.32
UBR4-203ENST00000375225 ZACNQ401N2 412 aa13.06□□□□□ -0.32
UBR4-203ENST00000375225 C6orf118Q5T5N4 469 aa13.06□□□□□ -0.32
UBR4-203ENST00000375225 CCDC60Q8IWA6 550 aaPredicted RBP13.06□□□□□ -0.32
UBR4-203ENST00000375225 SH2D3CQ8N5H7 860 aa13.06□□□□□ -0.32
UBR4-203ENST00000375225 BBOF1Q8ND07 529 aa13.06□□□□□ -0.32
UBR4-203ENST00000375225 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.06□□□□□ -0.32
UBR4-203ENST00000375225 BBXQ8WY36 941 aaPredicted RBP13.06□□□□□ -0.32
UBR4-203ENST00000375225 BSNDQ8WZ55 320 aa13.06□□□□□ -0.32
UBR4-203ENST00000375225 SLCO2A1Q92959 643 aa13.06□□□□□ -0.32
UBR4-203ENST00000375225 KAT5Q92993 513 aa13.06□□□□□ -0.32
UBR4-203ENST00000375225 SH2D3AQ9BRG2 576 aa13.06□□□□□ -0.32
UBR4-203ENST00000375225 TRIM51Q9BSJ1 452 aa13.06□□□□□ -0.32
UBR4-203ENST00000375225 NIFKQ9BYG3 293 aaKnown RBP13.06□□□□□ -0.32
UBR4-203ENST00000375225 TRIM31Q9BZY9 425 aa13.06□□□□□ -0.32
UBR4-203ENST00000375225 PORCNQ9H237 461 aa13.06□□□□□ -0.32
UBR4-203ENST00000375225 PABPC3Q9H361 631 aaKnown RBP13.06□□□□□ -0.32
UBR4-203ENST00000375225 ATP8A1Q9Y2Q0 1164 aa13.06□□□□□ -0.32
UBR4-203ENST00000375225 MAFBQ9Y5Q3 323 aaPredicted RBP13.06□□□□□ -0.32
UBR4-203ENST00000375225 NFS1Q9Y697 457 aa13.06□□□□□ -0.32
UBR4-203ENST00000375225 LRRC37A2A6NM11 1700 aa13.06□□□□□ -0.32
UBR4-203ENST00000375225 ZNFX1Q9P2E3 1918 aaKnown RBP13.05□□□□□ -0.32
UBR4-203ENST00000375225 LOC102724159A0A0B4J2E5 919 aa13.05□□□□□ -0.32
UBR4-203ENST00000375225 GAS8O95995 478 aa13.05□□□□□ -0.32
UBR4-203ENST00000375225 EFNA5P52803 228 aa13.05□□□□□ -0.32
UBR4-203ENST00000375225 CNTN2Q02246 1040 aa13.05□□□□□ -0.32
UBR4-203ENST00000375225 PTP4A2Q12974 167 aa13.05□□□□□ -0.32
UBR4-203ENST00000375225 GRM1Q13255 1194 aa13.05□□□□□ -0.32
UBR4-203ENST00000375225 BYSLQ13895 437 aaKnown RBP13.05□□□□□ -0.32
UBR4-203ENST00000375225 PWP2Q15269 919 aaKnown RBP13.05□□□□□ -0.32
UBR4-203ENST00000375225 PPP1R7Q15435 360 aa13.05□□□□□ -0.32
UBR4-203ENST00000375225 TRADDQ15628 312 aa13.05□□□□□ -0.32
UBR4-203ENST00000375225 Q3C1V9 767 aa13.05□□□□□ -0.32
UBR4-203ENST00000375225 SLC39A4Q6P5W5 647 aa13.05□□□□□ -0.32
UBR4-203ENST00000375225 KCNV1Q6PIU1 500 aa13.05□□□□□ -0.32
UBR4-203ENST00000375225 C15orf39Q6ZRI6 1047 aa13.05□□□□□ -0.32
UBR4-203ENST00000375225 SAPCD2Q86UD0 394 aa13.05□□□□□ -0.32
UBR4-203ENST00000375225 PRELID2Q8N945 189 aa13.05□□□□□ -0.32
UBR4-203ENST00000375225 DDX1Q92499 740 aaKnown RBP13.05□□□□□ -0.32
UBR4-203ENST00000375225 CGRRF1Q99675 332 aa13.05□□□□□ -0.32
UBR4-203ENST00000375225 JPH2Q9BR39 696 aaPredicted RBP13.05□□□□□ -0.32
UBR4-203ENST00000375225 NEUROG2Q9H2A3 272 aa13.05□□□□□ -0.32
UBR4-203ENST00000375225 LRRC19Q9H756 370 aa13.05□□□□□ -0.32
UBR4-203ENST00000375225 XPNPEP1Q9NQW7 623 aa13.05□□□□□ -0.32
UBR4-203ENST00000375225 RBAKQ9NYW8 714 aaPredicted RBP13.05□□□□□ -0.32
UBR4-203ENST00000375225 WHRNQ9P202 907 aa13.05□□□□□ -0.32
UBR4-203ENST00000375225 MORF4L1Q9UBU8 362 aa13.05□□□□□ -0.32
UBR4-203ENST00000375225 ANAPC7Q9UJX3 599 aa13.05□□□□□ -0.32
UBR4-203ENST00000375225 LRRIQ4A6NIV6 560 aa13.04□□□□□ -0.32
UBR4-203ENST00000375225 FSCN2O14926 492 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms