RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 DBN1Q16643 649 aa8.78□□□□□ -1
UBR4-202ENST00000375224 LY6KQ17RY6 165 aa8.78□□□□□ -1
UBR4-202ENST00000375224 ACAD10Q6JQN1 1059 aa8.78□□□□□ -1
UBR4-202ENST00000375224 SLC47A2Q86VL8 602 aa8.78□□□□□ -1
UBR4-202ENST00000375224 GPR20Q99678 358 aa8.78□□□□□ -1
UBR4-202ENST00000375224 WNT8AQ9H1J5 351 aa8.78□□□□□ -1
UBR4-202ENST00000375224 GOLPH3Q9H4A6 298 aa8.78□□□□□ -1
UBR4-202ENST00000375224 SMARCAD1Q9H4L7 1026 aa8.78□□□□□ -1
UBR4-202ENST00000375224 PCDHB2Q9Y5E7 798 aa8.78□□□□□ -1
UBR4-202ENST00000375224 GOLGA6BA6NDN3 693 aa8.78□□□□□ -1
UBR4-202ENST00000375224 DDX3YO15523 660 aaKnown RBP8.78□□□□□ -1
UBR4-202ENST00000375224 CLDN3O15551 220 aa8.78□□□□□ -1
UBR4-202ENST00000375224 KIAA0754O94854 1291 aa8.78□□□□□ -1
UBR4-202ENST00000375224 MYBL1P10243 752 aa8.78□□□□□ -1
UBR4-202ENST00000375224 MAGEA8P43361 318 aa8.78□□□□□ -1
UBR4-202ENST00000375224 NLRP11P59045 1033 aaKnown RBP8.78□□□□□ -1
UBR4-202ENST00000375224 CAPSQ13938 189 aa8.78□□□□□ -1
UBR4-202ENST00000375224 TFDP1Q14186 410 aa8.78□□□□□ -1
UBR4-202ENST00000375224 TTLL4Q14679 1199 aa8.78□□□□□ -1
UBR4-202ENST00000375224 LRRC31Q6UY01 552 aa8.78□□□□□ -1
UBR4-202ENST00000375224 DNAJC14Q6Y2X3 702 aaPredicted RBP8.78□□□□□ -1
UBR4-202ENST00000375224 TRIM72Q6ZMU5 477 aa8.78□□□□□ -1
UBR4-202ENST00000375224 CEP57Q86XR8 500 aa8.78□□□□□ -1
UBR4-202ENST00000375224 PALB2Q86YC2 1186 aa8.78□□□□□ -1
UBR4-202ENST00000375224 KLHL7Q8IXQ5 586 aa8.78□□□□□ -1
UBR4-202ENST00000375224 ZBTB10Q96DT7 871 aa8.78□□□□□ -1
UBR4-202ENST00000375224 RUFY1Q96T51 708 aa8.78□□□□□ -1
UBR4-202ENST00000375224 PCDHB18PQ96TA0 734 aa8.78□□□□□ -1
UBR4-202ENST00000375224 SYT17Q9BSW7 474 aa8.78□□□□□ -1
UBR4-202ENST00000375224 TARS2Q9BW92 718 aaKnown RBP8.78□□□□□ -1
UBR4-202ENST00000375224 CENPHQ9H3R5 247 aa8.78□□□□□ -1
UBR4-202ENST00000375224 G3BP2Q9UN86 482 aaKnown RBP8.78□□□□□ -1
UBR4-202ENST00000375224 ALG6Q9Y672 507 aa8.78□□□□□ -1
UBR4-202ENST00000375224 IQCA1LA6NCM1 817 aa8.78□□□□□ -1
UBR4-202ENST00000375224 ASAP2O43150 1006 aa8.78□□□□□ -1
UBR4-202ENST00000375224 HSF2BPO75031 334 aa8.78□□□□□ -1
UBR4-202ENST00000375224 RPS6KA5O75582 802 aa8.78□□□□□ -1
UBR4-202ENST00000375224 GLI1P08151 1106 aa8.78□□□□□ -1
UBR4-202ENST00000375224 MMEP08473 750 aa8.78□□□□□ -1
UBR4-202ENST00000375224 PECAM1P16284 738 aaPredicted RBP8.78□□□□□ -1
UBR4-202ENST00000375224 EEPD1Q7L9B9 569 aa8.78□□□□□ -1
UBR4-202ENST00000375224 MICAL1Q8TDZ2 1067 aa8.78□□□□□ -1
UBR4-202ENST00000375224 PRPF31Q8WWY3 499 aaKnown RBP8.78□□□□□ -1
UBR4-202ENST00000375224 ZNF516Q92618 1163 aa8.78□□□□□ -1
UBR4-202ENST00000375224 IMPG2Q9BZV3 1241 aa8.78□□□□□ -1
UBR4-202ENST00000375224 SART1O43290 800 aaKnown RBP8.77□□□□□ -1.01
UBR4-202ENST00000375224 RAD51CO43502 376 aa8.77□□□□□ -1.01
UBR4-202ENST00000375224 HBP1O60381 514 aa8.77□□□□□ -1.01
UBR4-202ENST00000375224 PEX10O60683 326 aa8.77□□□□□ -1.01
UBR4-202ENST00000375224 PHACTR2O75167 634 aa8.77□□□□□ -1.01
UBR4-202ENST00000375224 TOM1L1O75674 476 aa8.77□□□□□ -1.01
UBR4-202ENST00000375224 ACOT2P49753 483 aa8.77□□□□□ -1.01
UBR4-202ENST00000375224 ERVK-9P63128 1117 aa8.77□□□□□ -1.01
UBR4-202ENST00000375224 MOGSQ13724 837 aa8.77□□□□□ -1.01
UBR4-202ENST00000375224 MAPK6Q16659 721 aa8.77□□□□□ -1.01
UBR4-202ENST00000375224 CLEC16AQ2KHT3 1053 aa8.77□□□□□ -1.01
UBR4-202ENST00000375224 CDCA2Q69YH5 1023 aaPredicted RBP8.77□□□□□ -1.01
UBR4-202ENST00000375224 MYLK4Q86YV6 388 aaPredicted RBP8.77□□□□□ -1.01
UBR4-202ENST00000375224 GSPT2Q8IYD1 628 aaKnown RBP8.77□□□□□ -1.01
UBR4-202ENST00000375224 IFT81Q8WYA0 676 aa8.77□□□□□ -1.01
UBR4-202ENST00000375224 ZNF653Q96CK0 615 aa8.77□□□□□ -1.01
UBR4-202ENST00000375224 SLC10A4Q96EP9 437 aa8.77□□□□□ -1.01
UBR4-202ENST00000375224 SPATA33Q96N06 139 aa8.77□□□□□ -1.01
UBR4-202ENST00000375224 PLVAPQ9BX97 442 aa8.77□□□□□ -1.01
UBR4-202ENST00000375224 TAF1DQ9H5J8 278 aaPredicted RBP8.77□□□□□ -1.01
UBR4-202ENST00000375224 TXNRD2Q9NNW7 524 aa8.77□□□□□ -1.01
UBR4-202ENST00000375224 ANKFY1Q9P2R3 1169 aa8.77□□□□□ -1.01
UBR4-202ENST00000375224 COG5Q9UP83 839 aa8.77□□□□□ -1.01
UBR4-202ENST00000375224 ADGRA2Q96PE1 1338 aa8.77□□□□□ -1.01
UBR4-202ENST00000375224 IGKV6-21A0A0C4DH24 114 aa8.77□□□□□ -1.01
UBR4-202ENST00000375224 SOCS7O14512 581 aa8.77□□□□□ -1.01
UBR4-202ENST00000375224 PGK2P07205 417 aa8.77□□□□□ -1.01
UBR4-202ENST00000375224 GRIK3Q13003 919 aa8.77□□□□□ -1.01
UBR4-202ENST00000375224 LDLRAD1Q5T700 205 aa8.77□□□□□ -1.01
UBR4-202ENST00000375224 SEL1L2Q5TEA6 688 aa8.77□□□□□ -1.01
UBR4-202ENST00000375224 WDR78Q5VTH9 848 aa8.77□□□□□ -1.01
UBR4-202ENST00000375224 GPAT2Q6NUI2 795 aa8.77□□□□□ -1.01
UBR4-202ENST00000375224 CRELD2Q6UXH1 353 aaPredicted RBP8.77□□□□□ -1.01
UBR4-202ENST00000375224 BRSK2Q8IWQ3 736 aa8.77□□□□□ -1.01
UBR4-202ENST00000375224 MREGQ8N565 214 aa8.77□□□□□ -1.01
UBR4-202ENST00000375224 ZNF564Q8TBZ8 553 aaPredicted RBP8.77□□□□□ -1.01
UBR4-202ENST00000375224 DDX1Q92499 740 aaKnown RBP8.77□□□□□ -1.01
UBR4-202ENST00000375224 RNPC3Q96LT9 517 aaKnown RBP8.77□□□□□ -1.01
UBR4-202ENST00000375224 MCM8Q9UJA3 840 aa8.77□□□□□ -1.01
UBR4-202ENST00000375224 SLC45A1Q9Y2W3 748 aa8.77□□□□□ -1.01
UBR4-202ENST00000375224 FGGP02679 453 aa8.77□□□□□ -1.01
UBR4-202ENST00000375224 LAMTOR4Q0VGL1 99 aa8.77□□□□□ -1.01
UBR4-202ENST00000375224 CUL2Q13617 745 aa8.77□□□□□ -1.01
UBR4-202ENST00000375224 Q3C1V9 767 aa8.77□□□□□ -1.01
UBR4-202ENST00000375224 TDRD10Q5VZ19 366 aaKnown RBP8.77□□□□□ -1.01
UBR4-202ENST00000375224 CCDC62Q6P9F0 684 aa8.77□□□□□ -1.01
UBR4-202ENST00000375224 PNMA8AQ86V59 439 aaPredicted RBP8.77□□□□□ -1.01
UBR4-202ENST00000375224 WDR49Q8IV35 697 aa8.77□□□□□ -1.01
UBR4-202ENST00000375224 ZBTB45Q96K62 511 aaPredicted RBP8.77□□□□□ -1.01
UBR4-202ENST00000375224 RUNDC3BQ96NL0 473 aa8.77□□□□□ -1.01
UBR4-202ENST00000375224 TCHPQ9BT92 498 aa8.77□□□□□ -1.01
UBR4-202ENST00000375224 NUP85Q9BW27 656 aa8.77□□□□□ -1.01
UBR4-202ENST00000375224 RAB17Q9H0T7 212 aa8.77□□□□□ -1.01
UBR4-202ENST00000375224 AVENQ9NQS1 362 aaPredicted RBP8.77□□□□□ -1.01
UBR4-202ENST00000375224 NFU1Q9UMS0 254 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms