RNA–Protein interactions for RNA: ENST00000374826.8

PMS1-202, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best) BASIC

Gene PMS1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-202ENST00000374826 GIMAP6Q6P9H5 292 aa5.9□□□□□ -1.46
PMS1-202ENST00000374826 FRMD7Q6ZUT3 714 aa5.9□□□□□ -1.46
PMS1-202ENST00000374826 RNF180Q86T96 592 aa5.9□□□□□ -1.46
PMS1-202ENST00000374826 THNSL2Q86YJ6 484 aa5.9□□□□□ -1.46
PMS1-202ENST00000374826 UNC5BQ8IZJ1 945 aa5.9□□□□□ -1.46
PMS1-202ENST00000374826 MB21D1Q8N884 522 aa5.9□□□□□ -1.46
PMS1-202ENST00000374826 PIK3C3Q8NEB9 887 aa5.9□□□□□ -1.46
PMS1-202ENST00000374826 ST8SIA2Q92186 375 aa5.9□□□□□ -1.46
PMS1-202ENST00000374826 ARL8AQ96BM9 186 aa5.9□□□□□ -1.46
PMS1-202ENST00000374826 ZNHIT2Q9UHR6 403 aa5.9□□□□□ -1.46
PMS1-202ENST00000374826 PPP2R3BQ9Y5P8 575 aa5.9□□□□□ -1.46
PMS1-202ENST00000374826 HS3ST4Q9Y661 456 aa5.9□□□□□ -1.46
PMS1-202ENST00000374826 OVOS2A0A0J9YW53 1432 aa5.9□□□□□ -1.47
PMS1-202ENST00000374826 OVOS2Q6IE36 1432 aa5.9□□□□□ -1.47
PMS1-202ENST00000374826 NSD3Q9BZ95 1437 aa5.9□□□□□ -1.47
PMS1-202ENST00000374826 SHANK3Q9BYB0 1731 aa5.89□□□□□ -1.47
PMS1-202ENST00000374826 PRSS38A1L453 326 aa5.89□□□□□ -1.47
PMS1-202ENST00000374826 GAAP10253 952 aa5.89□□□□□ -1.47
PMS1-202ENST00000374826 BPIP17213 487 aa5.89□□□□□ -1.47
PMS1-202ENST00000374826 GPR15P49685 360 aa5.89□□□□□ -1.47
PMS1-202ENST00000374826 MANFP55145 182 aaKnown RBP5.89□□□□□ -1.47
PMS1-202ENST00000374826 NPEPPSP55786 919 aa5.89□□□□□ -1.47
PMS1-202ENST00000374826 SPIDRQ14159 915 aa5.89□□□□□ -1.47
PMS1-202ENST00000374826 ATP13A4Q4VNC1 1196 aa5.89□□□□□ -1.47
PMS1-202ENST00000374826 HDGFL2Q7Z4V5 671 aaPredicted RBP5.89□□□□□ -1.47
PMS1-202ENST00000374826 PRIMA1Q86XR5 153 aa5.89□□□□□ -1.47
PMS1-202ENST00000374826 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.89□□□□□ -1.47
PMS1-202ENST00000374826 GAB3Q8WWW8 586 aa5.89□□□□□ -1.47
PMS1-202ENST00000374826 SLKQ9H2G2 1235 aaPredicted RBP5.89□□□□□ -1.47
PMS1-202ENST00000374826 WDR26Q9H7D7 661 aa5.89□□□□□ -1.47
PMS1-202ENST00000374826 IFT22Q9H7X7 185 aa5.89□□□□□ -1.47
PMS1-202ENST00000374826 AFF2P51816 1311 aa5.89□□□□□ -1.47
PMS1-202ENST00000374826 KIF7Q2M1P5 1343 aa5.89□□□□□ -1.47
PMS1-202ENST00000374826 TTC21BQ7Z4L5 1316 aa5.89□□□□□ -1.47
PMS1-202ENST00000374826 BRD4O60885 1362 aaPredicted RBP5.89□□□□□ -1.47
PMS1-202ENST00000374826 CAMTA1Q9Y6Y1 1673 aa5.88□□□□□ -1.47
PMS1-202ENST00000374826 PARP4Q9UKK3 1724 aaKnown RBP5.88□□□□□ -1.47
PMS1-202ENST00000374826 NRP2O60462 931 aa5.88□□□□□ -1.47
PMS1-202ENST00000374826 PPFIA4O75335 1185 aa5.88□□□□□ -1.47
PMS1-202ENST00000374826 SEC24DO94855 1032 aaPredicted RBP5.88□□□□□ -1.47
PMS1-202ENST00000374826 XPAP23025 273 aaPredicted RBP5.88□□□□□ -1.47
PMS1-202ENST00000374826 HSD3B2P26439 372 aa5.88□□□□□ -1.47
PMS1-202ENST00000374826 CD69Q07108 199 aa5.88□□□□□ -1.47
PMS1-202ENST00000374826 SDE2Q6IQ49 451 aa5.88□□□□□ -1.47
PMS1-202ENST00000374826 CPT1CQ8TCG5 803 aa5.88□□□□□ -1.47
PMS1-202ENST00000374826 NTN5Q8WTR8 489 aaPredicted RBP5.88□□□□□ -1.47
PMS1-202ENST00000374826 PUS7Q96PZ0 661 aaKnown RBP5.88□□□□□ -1.47
PMS1-202ENST00000374826 ANO3Q9BYT9 981 aa5.88□□□□□ -1.47
PMS1-202ENST00000374826 ING3Q9NXR8 418 aa5.88□□□□□ -1.47
PMS1-202ENST00000374826 TERF2IPQ9NYB0 399 aa5.88□□□□□ -1.47
PMS1-202ENST00000374826 PTGFRNQ9P2B2 879 aa5.88□□□□□ -1.47
PMS1-202ENST00000374826 KCNG1Q9UIX4 513 aa5.88□□□□□ -1.47
PMS1-202ENST00000374826 SORCS3Q9UPU3 1222 aa5.88□□□□□ -1.47
PMS1-202ENST00000374826 NUMBLQ9Y6R0 609 aa5.88□□□□□ -1.47
PMS1-202ENST00000374826 USP19O94966 1318 aa5.88□□□□□ -1.47
PMS1-202ENST00000374826 TTC21AQ8NDW8 1320 aa5.88□□□□□ -1.47
PMS1-202ENST00000374826 KIAA0232Q92628 1395 aa5.88□□□□□ -1.47
PMS1-202ENST00000374826 CCDC7Q96M83 1385 aa5.88□□□□□ -1.47
PMS1-202ENST00000374826 SLIT2O94813 1529 aa5.88□□□□□ -1.47
PMS1-202ENST00000374826 ABCC6O95255 1503 aa5.88□□□□□ -1.47
PMS1-202ENST00000374826 LRRC37A3O60309 1634 aa5.88□□□□□ -1.47
PMS1-202ENST00000374826 THSD7AQ9UPZ6 1657 aa5.88□□□□□ -1.47
PMS1-202ENST00000374826 GRID2IPA4D2P6 1211 aa5.87□□□□□ -1.47
PMS1-202ENST00000374826 ZAR1LA6NP61 321 aa5.87□□□□□ -1.47
PMS1-202ENST00000374826 ALDH1A2O94788 518 aa5.87□□□□□ -1.47
PMS1-202ENST00000374826 LY86O95711 162 aa5.87□□□□□ -1.47
PMS1-202ENST00000374826 CLEC2LP0C7M8 214 aa5.87□□□□□ -1.47
PMS1-202ENST00000374826 GNAT2P19087 354 aa5.87□□□□□ -1.47
PMS1-202ENST00000374826 NRG3P56975 720 aa5.87□□□□□ -1.47
PMS1-202ENST00000374826 MRPS21P82921 87 aaKnown RBP5.87□□□□□ -1.47
PMS1-202ENST00000374826 PPARAQ07869 468 aa5.87□□□□□ -1.47
PMS1-202ENST00000374826 CCDC178Q5BJE1 867 aa5.87□□□□□ -1.47
PMS1-202ENST00000374826 DCAF17Q5H9S7 520 aaPredicted RBP5.87□□□□□ -1.47
PMS1-202ENST00000374826 KCNV1Q6PIU1 500 aa5.87□□□□□ -1.47
PMS1-202ENST00000374826 LMBR1LQ6UX01 489 aa5.87□□□□□ -1.47
PMS1-202ENST00000374826 LRRC55Q6ZSA7 311 aa5.87□□□□□ -1.47
PMS1-202ENST00000374826 DDX46Q7L014 1031 aaKnown RBP5.87□□□□□ -1.47
PMS1-202ENST00000374826 APBB1IPQ7Z5R6 666 aaPredicted RBP5.87□□□□□ -1.47
PMS1-202ENST00000374826 RASSF3Q86WH2 238 aa5.87□□□□□ -1.47
PMS1-202ENST00000374826 ZNF764Q96H86 408 aaPredicted RBP5.87□□□□□ -1.47
PMS1-202ENST00000374826 TTC1Q99614 292 aa5.87□□□□□ -1.47
PMS1-202ENST00000374826 FDXACB1Q9BRP7 624 aaPredicted RBP5.87□□□□□ -1.47
PMS1-202ENST00000374826 WNT8AQ9H1J5 351 aa5.87□□□□□ -1.47
PMS1-202ENST00000374826 TOR3AQ9H497 397 aa5.87□□□□□ -1.47
PMS1-202ENST00000374826 RGS17Q9UGC6 210 aaPredicted RBP5.87□□□□□ -1.47
PMS1-202ENST00000374826 TMPRSS11EQ9UL52 423 aa5.87□□□□□ -1.47
PMS1-202ENST00000374826 NOC2LQ9Y3T9 749 aaKnown RBP5.87□□□□□ -1.47
PMS1-202ENST00000374826 BCL9LQ86UU0 1499 aa5.87□□□□□ -1.47
PMS1-202ENST00000374826 ITGB4P16144 1822 aa5.87□□□□□ -1.47
PMS1-202ENST00000374826 DLG5Q8TDM6 1919 aa5.87□□□□□ -1.47
PMS1-202ENST00000374826 COL5A2P05997 1499 aaPredicted RBP5.86□□□□□ -1.47
PMS1-202ENST00000374826 WASHC2AQ641Q2 1341 aa5.86□□□□□ -1.47
PMS1-202ENST00000374826 NEMP1O14524 444 aa5.86□□□□□ -1.47
PMS1-202ENST00000374826 NRP1O14786 923 aa5.86□□□□□ -1.47
PMS1-202ENST00000374826 B3GALT2O43825 422 aa5.86□□□□□ -1.47
PMS1-202ENST00000374826 ZEB2O60315 1214 aa5.86□□□□□ -1.47
PMS1-202ENST00000374826 ULK1O75385 1050 aa5.86□□□□□ -1.47
PMS1-202ENST00000374826 STC2O76061 302 aa5.86□□□□□ -1.47
PMS1-202ENST00000374826 HK1P19367 917 aa5.86□□□□□ -1.47
PMS1-202ENST00000374826 ID4P47928 161 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms