RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 TLR1Q15399 786 aa8.43□□□□□ -1.06
USP48-203ENST00000374732 SGCAQ16586 387 aa8.43□□□□□ -1.06
USP48-203ENST00000374732 BORAQ6PGQ7 559 aa8.43□□□□□ -1.06
USP48-203ENST00000374732 ZNF554Q86TJ5 538 aa8.43□□□□□ -1.06
USP48-203ENST00000374732 SLC38A6Q8IZM9 456 aa8.43□□□□□ -1.06
USP48-203ENST00000374732 LRRC71Q8N4P6 559 aa8.43□□□□□ -1.06
USP48-203ENST00000374732 NEDD1Q8NHV4 660 aa8.43□□□□□ -1.06
USP48-203ENST00000374732 SECISBP2Q96T21 854 aaKnown RBP8.43□□□□□ -1.06
USP48-203ENST00000374732 CRB3Q9BUF7 120 aa8.43□□□□□ -1.06
USP48-203ENST00000374732 ZNF287Q9HBT7 754 aa8.43□□□□□ -1.06
USP48-203ENST00000374732 EURLQ9NYK6 297 aa8.43□□□□□ -1.06
USP48-203ENST00000374732 ZBTB21Q9ULJ3 1066 aa8.43□□□□□ -1.06
USP48-203ENST00000374732 CICQ96RK0 1608 aaPredicted RBP8.43□□□□□ -1.06
USP48-203ENST00000374732 KDM3BQ7LBC6 1761 aa8.43□□□□□ -1.06
USP48-203ENST00000374732 E9PMD0 336 aa8.43□□□□□ -1.06
USP48-203ENST00000374732 MEN1O00255 615 aa8.43□□□□□ -1.06
USP48-203ENST00000374732 GUCY1B2O75343 617 aa8.43□□□□□ -1.06
USP48-203ENST00000374732 MICAL2O94851 1124 aa8.43□□□□□ -1.06
USP48-203ENST00000374732 OXSR1O95747 527 aaPredicted RBP8.43□□□□□ -1.06
USP48-203ENST00000374732 ABCB1P08183 1280 aaPredicted RBP8.43□□□□□ -1.06
USP48-203ENST00000374732 PABPC4LP0CB38 370 aaKnown RBP8.43□□□□□ -1.06
USP48-203ENST00000374732 EPB41P11171 864 aaKnown RBP8.43□□□□□ -1.06
USP48-203ENST00000374732 NAGAP17050 411 aa8.43□□□□□ -1.06
USP48-203ENST00000374732 SERPINB8P50452 374 aa8.43□□□□□ -1.06
USP48-203ENST00000374732 TRIM32Q13049 653 aa8.43□□□□□ -1.06
USP48-203ENST00000374732 DOC2AQ14183 400 aa8.43□□□□□ -1.06
USP48-203ENST00000374732 MAP3K11Q16584 847 aa8.43□□□□□ -1.06
USP48-203ENST00000374732 FAM205BPQ63HN1 556 aa8.43□□□□□ -1.06
USP48-203ENST00000374732 OR7E24Q6IFN5 339 aa8.43□□□□□ -1.06
USP48-203ENST00000374732 LHFPL2Q6ZUX7 228 aa8.43□□□□□ -1.06
USP48-203ENST00000374732 FBXO30Q8TB52 745 aa8.43□□□□□ -1.06
USP48-203ENST00000374732 INPP5DQ92835 1189 aa8.43□□□□□ -1.06
USP48-203ENST00000374732 SELENOSQ9BQE4 189 aa8.43□□□□□ -1.06
USP48-203ENST00000374732 KRT23Q9C075 422 aa8.43□□□□□ -1.06
USP48-203ENST00000374732 AKAP7Q9P0M2 348 aaPredicted RBP8.43□□□□□ -1.06
USP48-203ENST00000374732 CCDC171Q6TFL3 1326 aa8.42□□□□□ -1.06
USP48-203ENST00000374732 SFI1A8K8P3 1242 aa8.42□□□□□ -1.06
USP48-203ENST00000374732 RAD51BO15315 384 aa8.42□□□□□ -1.06
USP48-203ENST00000374732 CTNND1O60716 968 aaKnown RBP8.42□□□□□ -1.06
USP48-203ENST00000374732 TBC1D8O95759 1140 aa8.42□□□□□ -1.06
USP48-203ENST00000374732 HTR2BP41595 481 aa8.42□□□□□ -1.06
USP48-203ENST00000374732 CNGA2Q16280 664 aa8.42□□□□□ -1.06
USP48-203ENST00000374732 KRT24Q2M2I5 525 aa8.42□□□□□ -1.06
USP48-203ENST00000374732 WDR73Q6P4I2 378 aa8.42□□□□□ -1.06
USP48-203ENST00000374732 NLRC3Q7RTR2 1065 aa8.42□□□□□ -1.06
USP48-203ENST00000374732 AKAP14Q86UN6 197 aa8.42□□□□□ -1.06
USP48-203ENST00000374732 BSNDQ8WZ55 320 aa8.42□□□□□ -1.06
USP48-203ENST00000374732 PMEPA1Q969W9 287 aa8.42□□□□□ -1.06
USP48-203ENST00000374732 VPS39Q96JC1 886 aa8.42□□□□□ -1.06
USP48-203ENST00000374732 SLC26A6Q9BXS9 759 aa8.42□□□□□ -1.06
USP48-203ENST00000374732 LMAN2LQ9H0V9 348 aa8.42□□□□□ -1.06
USP48-203ENST00000374732 STMN4Q9H169 189 aaPredicted RBP8.42□□□□□ -1.06
USP48-203ENST00000374732 RAD21L1Q9H4I0 556 aa8.42□□□□□ -1.06
USP48-203ENST00000374732 TRPV4Q9HBA0 871 aa8.42□□□□□ -1.06
USP48-203ENST00000374732 TOPORSQ9NS56 1045 aaPredicted RBP8.42□□□□□ -1.06
USP48-203ENST00000374732 CLEC11AQ9Y240 323 aa8.42□□□□□ -1.06
USP48-203ENST00000374732 SESN1Q9Y6P5 492 aa8.42□□□□□ -1.06
USP48-203ENST00000374732 OR6C74A6NCV1 312 aa8.42□□□□□ -1.06
USP48-203ENST00000374732 GOLGA8CPA6NN73 597 aa8.42□□□□□ -1.06
USP48-203ENST00000374732 IKBKBO14920 756 aa8.42□□□□□ -1.06
USP48-203ENST00000374732 ZSCAN12O43309 604 aa8.42□□□□□ -1.06
USP48-203ENST00000374732 SORBS3O60504 671 aa8.42□□□□□ -1.06
USP48-203ENST00000374732 CKBP12277 381 aa8.42□□□□□ -1.06
USP48-203ENST00000374732 VCPP55072 806 aaKnown RBP8.42□□□□□ -1.06
USP48-203ENST00000374732 NR1D2Q14995 579 aa8.42□□□□□ -1.06
USP48-203ENST00000374732 CDONQ4KMG0 1287 aa8.42□□□□□ -1.06
USP48-203ENST00000374732 AAGABQ6PD74 315 aa8.42□□□□□ -1.06
USP48-203ENST00000374732 BEND4Q6ZU67 534 aa8.42□□□□□ -1.06
USP48-203ENST00000374732 PLEKHM2Q8IWE5 1019 aa8.42□□□□□ -1.06
USP48-203ENST00000374732 TCEAL8Q8IYN2 117 aa8.42□□□□□ -1.06
USP48-203ENST00000374732 ZNF454Q8N9F8 522 aa8.42□□□□□ -1.06
USP48-203ENST00000374732 SLC4A11Q8NBS3 891 aa8.42□□□□□ -1.06
USP48-203ENST00000374732 FAM149B1Q96BN6 582 aa8.42□□□□□ -1.06
USP48-203ENST00000374732 ZC3H10Q96K80 434 aaKnown RBP8.42□□□□□ -1.06
USP48-203ENST00000374732 NUSAP1Q9BXS6 441 aaKnown RBP8.42□□□□□ -1.06
USP48-203ENST00000374732 RHOBTB2Q9BYZ6 727 aa8.42□□□□□ -1.06
USP48-203ENST00000374732 NT5C3AQ9H0P0 336 aa8.42□□□□□ -1.06
USP48-203ENST00000374732 MROH8Q9H579 483 aa8.42□□□□□ -1.06
USP48-203ENST00000374732 SEMA3GQ9NS98 782 aa8.42□□□□□ -1.06
USP48-203ENST00000374732 ATP9AO75110 1047 aa8.41□□□□□ -1.06
USP48-203ENST00000374732 MYBP10242 640 aa8.41□□□□□ -1.06
USP48-203ENST00000374732 CSF2RAP15509 400 aa8.41□□□□□ -1.06
USP48-203ENST00000374732 PDGFRAP16234 1089 aa8.41□□□□□ -1.06
USP48-203ENST00000374732 PPP2R2AP63151 447 aa8.41□□□□□ -1.06
USP48-203ENST00000374732 PDE1BQ01064 536 aa8.41□□□□□ -1.06
USP48-203ENST00000374732 RNASELQ05823 741 aaKnown RBP8.41□□□□□ -1.06
USP48-203ENST00000374732 TBL3Q12788 808 aaKnown RBP8.41□□□□□ -1.06
USP48-203ENST00000374732 COTL1Q14019 142 aa8.41□□□□□ -1.06
USP48-203ENST00000374732 STILQ15468 1287 aa8.41□□□□□ -1.06
USP48-203ENST00000374732 DCAF17Q5H9S7 520 aaPredicted RBP8.41□□□□□ -1.06
USP48-203ENST00000374732 RPS26P11Q5JNZ5 115 aaPredicted RBP8.41□□□□□ -1.06
USP48-203ENST00000374732 TRAPPC3LQ5T215 181 aa8.41□□□□□ -1.06
USP48-203ENST00000374732 BNIPLQ7Z465 357 aa8.41□□□□□ -1.06
USP48-203ENST00000374732 NUP93Q8N1F7 819 aa8.41□□□□□ -1.06
USP48-203ENST00000374732 CRACR2BQ8N4Y2 399 aaPredicted RBP8.41□□□□□ -1.06
USP48-203ENST00000374732 C10orf53Q8N6V4 93 aa8.41□□□□□ -1.06
USP48-203ENST00000374732 ZBTB38Q8NAP3 1195 aaPredicted RBP8.41□□□□□ -1.06
USP48-203ENST00000374732 WDR60Q8WVS4 1066 aa8.41□□□□□ -1.06
USP48-203ENST00000374732 RMDN3Q96TC7 470 aa8.41□□□□□ -1.06
USP48-203ENST00000374732 EMILIN2Q9BXX0 1053 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms