RNA–Protein interactions for RNA: ENST00000374695.7

HSPG2-203, Transcript of heparan sulfate proteoglycan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HSPG2, Length 14,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-203ENST00000374695 AFG1LQ8WV93 481 aa8.78□□□□□ -1
HSPG2-203ENST00000374695 ROPN1BQ9BZX4 212 aaPredicted RBP8.78□□□□□ -1
HSPG2-203ENST00000374695 PIGUQ9H490 435 aa8.78□□□□□ -1
HSPG2-203ENST00000374695 ROPN1Q9HAT0 212 aaPredicted RBP8.78□□□□□ -1
HSPG2-203ENST00000374695 PALD1Q9ULE6 856 aa8.78□□□□□ -1
HSPG2-203ENST00000374695 RRM2P31350 389 aa8.78□□□□□ -1
HSPG2-203ENST00000374695 SLC9A5Q14940 896 aa8.78□□□□□ -1
HSPG2-203ENST00000374695 RNF135Q8IUD6 432 aa8.78□□□□□ -1
HSPG2-203ENST00000374695 MLXIPLQ9NP71 852 aa8.78□□□□□ -1
HSPG2-203ENST00000374695 ARSEP51690 589 aa8.77□□□□□ -1
HSPG2-203ENST00000374695 C1DQ13901 141 aaKnown RBP8.77□□□□□ -1
HSPG2-203ENST00000374695 NCAPHQ15003 741 aa8.77□□□□□ -1
HSPG2-203ENST00000374695 INPP5DQ92835 1189 aa8.77□□□□□ -1
HSPG2-203ENST00000374695 BHMT2Q9H2M3 363 aa8.77□□□□□ -1
HSPG2-203ENST00000374695 ASNA1O43681 348 aa8.77□□□□□ -1
HSPG2-203ENST00000374695 MLNP12872 115 aa8.77□□□□□ -1
HSPG2-203ENST00000374695 FBLN1P23142 703 aa8.77□□□□□ -1
HSPG2-203ENST00000374695 SFNP31947 248 aa8.77□□□□□ -1
HSPG2-203ENST00000374695 BCAMP50895 628 aa8.77□□□□□ -1
HSPG2-203ENST00000374695 KCNH2Q12809 1159 aa8.77□□□□□ -1
HSPG2-203ENST00000374695 LRRC41Q15345 812 aa8.77□□□□□ -1
HSPG2-203ENST00000374695 MTERF2Q49AM1 385 aa8.77□□□□□ -1
HSPG2-203ENST00000374695 NPHS2Q9NP85 383 aa8.77□□□□□ -1
HSPG2-203ENST00000374695 PTPRTO14522 1441 aa8.77□□□□□ -1.01
HSPG2-203ENST00000374695 ASXL2Q76L83 1435 aa8.77□□□□□ -1.01
HSPG2-203ENST00000374695 ARHGEF40Q8TER5 1519 aa8.77□□□□□ -1.01
HSPG2-203ENST00000374695 SLC16A3O15427 465 aaKnown RBP8.77□□□□□ -1.01
HSPG2-203ENST00000374695 COPAP53621 1224 aa8.77□□□□□ -1.01
HSPG2-203ENST00000374695 CDK17Q00537 523 aa8.77□□□□□ -1.01
HSPG2-203ENST00000374695 CC2D2BQ6DHV5 1058 aa8.77□□□□□ -1.01
HSPG2-203ENST00000374695 C11orf88Q6PI97 169 aa8.77□□□□□ -1.01
HSPG2-203ENST00000374695 PGBD4Q96DM1 585 aa8.77□□□□□ -1.01
HSPG2-203ENST00000374695 CARD9Q9H257 536 aa8.77□□□□□ -1.01
HSPG2-203ENST00000374695 PLEKHA5Q9HAU0 1116 aa8.77□□□□□ -1.01
HSPG2-203ENST00000374695 SF3B1O75533 1304 aaKnown RBP eCLIP8.77□□□□□ -1.012e-6■■■■■ 110.2
HSPG2-203ENST00000374695 MAGEA13PA6NCF6 341 aa8.77□□□□□ -1.01
HSPG2-203ENST00000374695 PPP1R37O75864 691 aa8.77□□□□□ -1.01
HSPG2-203ENST00000374695 ARMC3Q5W041 872 aa8.77□□□□□ -1.01
HSPG2-203ENST00000374695 KRT73Q86Y46 540 aa8.77□□□□□ -1.01
HSPG2-203ENST00000374695 PRDM4Q9UKN5 801 aa8.77□□□□□ -1.01
HSPG2-203ENST00000374695 MYO3BQ8WXR4 1341 aa8.77□□□□□ -1.01
HSPG2-203ENST00000374695 NPM3O75607 178 aaKnown RBP8.77□□□□□ -1.01
HSPG2-203ENST00000374695 NPEPPSP55786 919 aa8.77□□□□□ -1.01
HSPG2-203ENST00000374695 FAM45AQ8TCE6 357 aa8.77□□□□□ -1.01
HSPG2-203ENST00000374695 ZC3H7BQ9UGR2 993 aaKnown RBP8.77□□□□□ -1.01
HSPG2-203ENST00000374695 LMTK3Q96Q04 1460 aa8.77□□□□□ -1.01
HSPG2-203ENST00000374695 RPS6KA5O75582 802 aa8.77□□□□□ -1.01
HSPG2-203ENST00000374695 COPB2P35606 906 aa8.77□□□□□ -1.01
HSPG2-203ENST00000374695 QKIQ96PU8 341 aaKnown RBP eCLIP8.77□□□□□ -1.01
HSPG2-203ENST00000374695 LRRC53A6NM62 1247 aa8.77□□□□□ -1.01
HSPG2-203ENST00000374695 SCP2P22307 547 aa8.77□□□□□ -1.01
HSPG2-203ENST00000374695 STAT3P40763 770 aa8.77□□□□□ -1.01
HSPG2-203ENST00000374695 VAMP7P51809 220 aa8.77□□□□□ -1.01
HSPG2-203ENST00000374695 TSC22D1Q15714 1073 aa8.77□□□□□ -1.01
HSPG2-203ENST00000374695 TMC5Q6UXY8 1006 aa8.77□□□□□ -1.01
HSPG2-203ENST00000374695 A1CFQ9NQ94 594 aaKnown RBP8.77□□□□□ -1.01
HSPG2-203ENST00000374695 RWDD3Q9Y3V2 267 aa8.77□□□□□ -1.01
HSPG2-203ENST00000374695 PTCH1Q13635 1447 aa8.77□□□□□ -1.01
HSPG2-203ENST00000374695 SRRM3A6NNA2 597 aaPredicted RBP8.77□□□□□ -1.01
HSPG2-203ENST00000374695 CHN1P15882 459 aa8.77□□□□□ -1.01
HSPG2-203ENST00000374695 MDH1P40925 334 aaKnown RBP8.77□□□□□ -1.01
HSPG2-203ENST00000374695 ITIH4Q14624 930 aa8.77□□□□□ -1.01
HSPG2-203ENST00000374695 PRPF39Q86UA1 669 aaKnown RBP8.77□□□□□ -1.01
HSPG2-203ENST00000374695 MICALL2Q8IY33 904 aa8.77□□□□□ -1.01
HSPG2-203ENST00000374695 DPP10Q8N608 796 aa8.77□□□□□ -1.01
HSPG2-203ENST00000374695 LRRC39Q96DD0 335 aa8.77□□□□□ -1.01
HSPG2-203ENST00000374695 EEF2KMTQ96G04 330 aa8.77□□□□□ -1.01
HSPG2-203ENST00000374695 NSL1Q96IY1 281 aa8.77□□□□□ -1.01
HSPG2-203ENST00000374695 FAR2Q96K12 515 aa8.77□□□□□ -1.01
HSPG2-203ENST00000374695 TIPINQ9BVW5 301 aa8.77□□□□□ -1.01
HSPG2-203ENST00000374695 AREL1O15033 823 aa8.77□□□□□ -1.01
HSPG2-203ENST00000374695 KRT17Q04695 432 aa8.77□□□□□ -1.01
HSPG2-203ENST00000374695 CNTN1Q12860 1018 aa8.77□□□□□ -1.01
HSPG2-203ENST00000374695 PDAP1Q13442 181 aaKnown RBP8.77□□□□□ -1.01
HSPG2-203ENST00000374695 FRMD5Q7Z6J6 570 aa8.77□□□□□ -1.01
HSPG2-203ENST00000374695 ABCA8O94911 1581 aa8.77□□□□□ -1.01
HSPG2-203ENST00000374695 PPEF1O14829 653 aaPredicted RBP8.77□□□□□ -1.01
HSPG2-203ENST00000374695 TPI1P60174 286 aa8.77□□□□□ -1.01
HSPG2-203ENST00000374695 SHROOM1Q2M3G4 852 aaPredicted RBP8.77□□□□□ -1.01
HSPG2-203ENST00000374695 TTC39BQ5VTQ0 682 aaPredicted RBP8.77□□□□□ -1.01
HSPG2-203ENST00000374695 TMEM51Q9NW97 253 aa8.77□□□□□ -1.01
HSPG2-203ENST00000374695 CDK12Q9NYV4 1490 aaPredicted RBP8.77□□□□□ -1.01
HSPG2-203ENST00000374695 CFAP99D6REC4 459 aa8.77□□□□□ -1.01
HSPG2-203ENST00000374695 DPYSL4O14531 572 aa8.77□□□□□ -1.01
HSPG2-203ENST00000374695 KNOP1Q1ED39 458 aaKnown RBP8.77□□□□□ -1.01
HSPG2-203ENST00000374695 CCT8L2Q96SF2 557 aa8.77□□□□□ -1.01
HSPG2-203ENST00000374695 ADCY10Q96PN6 1610 aa8.76□□□□□ -1.01
HSPG2-203ENST00000374695 KRT6AP02538 564 aa8.76□□□□□ -1.01
HSPG2-203ENST00000374695 ADD2P35612 726 aa8.76□□□□□ -1.01
HSPG2-203ENST00000374695 KCTD1Q719H9 257 aa8.76□□□□□ -1.01
HSPG2-203ENST00000374695 RMND5BQ96G75 393 aaPredicted RBP8.76□□□□□ -1.01
HSPG2-203ENST00000374695 IREB2P48200 963 aaKnown RBP8.76□□□□□ -1.01
HSPG2-203ENST00000374695 ARPP19P56211 112 aa8.76□□□□□ -1.01
HSPG2-203ENST00000374695 KRT77Q7Z794 578 aa8.76□□□□□ -1.01
HSPG2-203ENST00000374695 ATPAF2Q8N5M1 289 aa8.76□□□□□ -1.01
HSPG2-203ENST00000374695 ZNF560Q96MR9 790 aa8.76□□□□□ -1.01
HSPG2-203ENST00000374695 CTNNAL1Q9UBT7 734 aa8.76□□□□□ -1.01
HSPG2-203ENST00000374695 SUPT3HB4E1H0 165 aa8.76□□□□□ -1.01
HSPG2-203ENST00000374695 PDE9AO76083 593 aa8.76□□□□□ -1.01
HSPG2-203ENST00000374695 ROR2Q01974 943 aaKnown RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms