RNA–Protein interactions for RNA: ENST00000374692.7

TMEM38B-202, Transcript of transmembrane protein 38B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM38B, Length 3,525 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38B-202ENST00000374692 PARP2Q9UGN5 583 aa12.75□□□□□ -0.37
TMEM38B-202ENST00000374692 TBK1Q9UHD2 729 aa12.75□□□□□ -0.37
TMEM38B-202ENST00000374692 UTP11Q9Y3A2 253 aaKnown RBP12.75□□□□□ -0.37
TMEM38B-202ENST00000374692 MYPNQ86TC9 1320 aa12.75□□□□□ -0.37
TMEM38B-202ENST00000374692 TLR3O15455 904 aaKnown RBP12.74□□□□□ -0.37
TMEM38B-202ENST00000374692 ADCY3O60266 1144 aa12.74□□□□□ -0.37
TMEM38B-202ENST00000374692 VNN1O95497 513 aa12.74□□□□□ -0.37
TMEM38B-202ENST00000374692 ACSL3O95573 720 aa12.74□□□□□ -0.37
TMEM38B-202ENST00000374692 DR1Q01658 176 aa12.74□□□□□ -0.37
TMEM38B-202ENST00000374692 TUBB2AQ13885 445 aa12.74□□□□□ -0.37
TMEM38B-202ENST00000374692 CELF3Q5SZQ8 465 aaKnown RBP12.74□□□□□ -0.37
TMEM38B-202ENST00000374692 LEKR1Q6ZMV7 388 aa12.74□□□□□ -0.37
TMEM38B-202ENST00000374692 OR6J1Q8NGC5 347 aa12.74□□□□□ -0.37
TMEM38B-202ENST00000374692 TUBB2BQ9BVA1 445 aa12.74□□□□□ -0.37
TMEM38B-202ENST00000374692 FBXL5Q9UKA1 691 aa12.74□□□□□ -0.37
TMEM38B-202ENST00000374692 PLAAQ9Y263 795 aa12.74□□□□□ -0.37
TMEM38B-202ENST00000374692 GPAT2Q6NUI2 795 aa12.74□□□□□ -0.37
TMEM38B-202ENST00000374692 CRELD2Q6UXH1 353 aaPredicted RBP12.74□□□□□ -0.37
TMEM38B-202ENST00000374692 LRRC57Q8N9N7 239 aa12.74□□□□□ -0.37
TMEM38B-202ENST00000374692 DNERQ8NFT8 737 aa12.74□□□□□ -0.37
TMEM38B-202ENST00000374692 AFAP1L1Q8TED9 768 aa12.74□□□□□ -0.37
TMEM38B-202ENST00000374692 C12orf42Q96LP6 360 aa12.74□□□□□ -0.37
TMEM38B-202ENST00000374692 HEXIM2Q96MH2 286 aaKnown RBP12.74□□□□□ -0.37
TMEM38B-202ENST00000374692 MIS12Q9H081 205 aa12.74□□□□□ -0.37
TMEM38B-202ENST00000374692 DHX33Q9H6R0 707 aaKnown RBP12.74□□□□□ -0.37
TMEM38B-202ENST00000374692 GOLGA2P5Q9HBQ8 144 aa12.74□□□□□ -0.37
TMEM38B-202ENST00000374692 PPANQ9NQ55 473 aaKnown RBP12.74□□□□□ -0.37
TMEM38B-202ENST00000374692 HMGXB4Q9UGU5 601 aa12.74□□□□□ -0.37
TMEM38B-202ENST00000374692 RAB21Q9UL25 225 aa12.74□□□□□ -0.37
TMEM38B-202ENST00000374692 AGAP1Q9UPQ3 857 aa12.74□□□□□ -0.37
TMEM38B-202ENST00000374692 GOLGA6L10A6NI86 522 aa12.74□□□□□ -0.37
TMEM38B-202ENST00000374692 H3BRB1 525 aa12.74□□□□□ -0.37
TMEM38B-202ENST00000374692 LCA5LO95447 670 aa12.74□□□□□ -0.37
TMEM38B-202ENST00000374692 LGALS2P05162 132 aa12.74□□□□□ -0.37
TMEM38B-202ENST00000374692 TMEM253P0C7T8 217 aa12.74□□□□□ -0.37
TMEM38B-202ENST00000374692 OAZ1P54368 228 aa12.74□□□□□ -0.37
TMEM38B-202ENST00000374692 ATP11AP98196 1134 aa12.74□□□□□ -0.37
TMEM38B-202ENST00000374692 PPFIA1Q13136 1202 aa12.74□□□□□ -0.37
TMEM38B-202ENST00000374692 PAK2Q13177 524 aa12.74□□□□□ -0.37
TMEM38B-202ENST00000374692 CUL2Q13617 745 aa12.74□□□□□ -0.37
TMEM38B-202ENST00000374692 KRT71Q3SY84 523 aa12.74□□□□□ -0.37
TMEM38B-202ENST00000374692 FASTKD5Q7L8L6 764 aaKnown RBP12.74□□□□□ -0.37
TMEM38B-202ENST00000374692 C12orf29Q8N999 325 aa12.74□□□□□ -0.37
TMEM38B-202ENST00000374692 TUT1Q9H6E5 874 aaKnown RBP12.74□□□□□ -0.37
TMEM38B-202ENST00000374692 RPF1Q9H9Y2 349 aaKnown RBP12.74□□□□□ -0.37
TMEM38B-202ENST00000374692 LRRC4CQ9HCJ2 640 aa12.74□□□□□ -0.37
TMEM38B-202ENST00000374692 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.74□□□□□ -0.37
TMEM38B-202ENST00000374692 ABT1Q9ULW3 272 aaKnown RBP12.74□□□□□ -0.37
TMEM38B-202ENST00000374692 MAFBQ9Y5Q3 323 aaPredicted RBP12.74□□□□□ -0.37
TMEM38B-202ENST00000374692 RTN2O75298 545 aa12.73□□□□□ -0.37
TMEM38B-202ENST00000374692 CSPG5O95196 566 aa12.73□□□□□ -0.37
TMEM38B-202ENST00000374692 PRKCIP41743 596 aa12.73□□□□□ -0.37
TMEM38B-202ENST00000374692 NAMPTP43490 491 aa12.73□□□□□ -0.37
TMEM38B-202ENST00000374692 GPC3P51654 580 aa12.73□□□□□ -0.37
TMEM38B-202ENST00000374692 ALCAMQ13740 583 aa12.73□□□□□ -0.37
TMEM38B-202ENST00000374692 SGO2Q562F6 1265 aa12.73□□□□□ -0.37
TMEM38B-202ENST00000374692 CATSPER4Q7RTX7 472 aa12.73□□□□□ -0.37
TMEM38B-202ENST00000374692 SELENOSQ9BQE4 189 aa12.73□□□□□ -0.37
TMEM38B-202ENST00000374692 GBA2Q9HCG7 927 aaPredicted RBP12.73□□□□□ -0.37
TMEM38B-202ENST00000374692 LRRD1A4D1F6 860 aa12.73□□□□□ -0.37
TMEM38B-202ENST00000374692 POLR2BP30876 1174 aaKnown RBP12.73□□□□□ -0.37
TMEM38B-202ENST00000374692 NRLP54845 237 aa12.73□□□□□ -0.37
TMEM38B-202ENST00000374692 DMTNQ08495 405 aa12.73□□□□□ -0.37
TMEM38B-202ENST00000374692 TAF1CQ15572 869 aaPredicted RBP12.73□□□□□ -0.37
TMEM38B-202ENST00000374692 CYP4F22Q6NT55 531 aa12.73□□□□□ -0.37
TMEM38B-202ENST00000374692 ZC3H3Q8IXZ2 948 aaKnown RBP12.73□□□□□ -0.37
TMEM38B-202ENST00000374692 SCFD2Q8WU76 684 aa12.73□□□□□ -0.37
TMEM38B-202ENST00000374692 UBE2Q2Q8WVN8 375 aa12.73□□□□□ -0.37
TMEM38B-202ENST00000374692 SMYD3Q9H7B4 428 aa12.73□□□□□ -0.37
TMEM38B-202ENST00000374692 CISHQ9NSE2 258 aa12.73□□□□□ -0.37
TMEM38B-202ENST00000374692 DAAM1Q9Y4D1 1078 aa12.73□□□□□ -0.37
TMEM38B-202ENST00000374692 GPR25O00155 361 aa12.72□□□□□ -0.37
TMEM38B-202ENST00000374692 TNNC2P02585 160 aa12.72□□□□□ -0.37
TMEM38B-202ENST00000374692 CDR2Q01850 454 aa12.72□□□□□ -0.37
TMEM38B-202ENST00000374692 GUCY1A3Q02108 690 aa12.72□□□□□ -0.37
TMEM38B-202ENST00000374692 CCDC142Q17RM4 750 aa12.72□□□□□ -0.37
TMEM38B-202ENST00000374692 CCDC137Q6PK04 289 aaKnown RBP12.72□□□□□ -0.37
TMEM38B-202ENST00000374692 FAM71AQ8IYT1 594 aa12.72□□□□□ -0.37
TMEM38B-202ENST00000374692 FAM76AQ8TAV0 307 aa12.72□□□□□ -0.37
TMEM38B-202ENST00000374692 HSPH1Q92598 858 aa12.72□□□□□ -0.37
TMEM38B-202ENST00000374692 STRA6Q9BX79 667 aa12.72□□□□□ -0.37
TMEM38B-202ENST00000374692 CDHR5Q9HBB8 845 aa12.72□□□□□ -0.37
TMEM38B-202ENST00000374692 TSKSQ9UJT2 592 aa12.72□□□□□ -0.37
TMEM38B-202ENST00000374692 PRRC2BQ5JSZ5 2229 aaKnown RBP12.72□□□□□ -0.37
TMEM38B-202ENST00000374692 GTPBP10A4D1E9 387 aaKnown RBP12.72□□□□□ -0.37
TMEM38B-202ENST00000374692 GLTPD2A6NH11 291 aa12.72□□□□□ -0.37
TMEM38B-202ENST00000374692 LYPLA2O95372 231 aa12.72□□□□□ -0.37
TMEM38B-202ENST00000374692 NPTXRO95502 500 aa12.72□□□□□ -0.37
TMEM38B-202ENST00000374692 YARSP54577 528 aaKnown RBP12.72□□□□□ -0.37
TMEM38B-202ENST00000374692 EFCAB13Q8IY85 973 aa12.72□□□□□ -0.37
TMEM38B-202ENST00000374692 C2orf69Q8N8R5 385 aa12.72□□□□□ -0.37
TMEM38B-202ENST00000374692 ATP8B4Q8TF62 1192 aa12.72□□□□□ -0.37
TMEM38B-202ENST00000374692 SHC3Q92529 594 aa12.72□□□□□ -0.37
TMEM38B-202ENST00000374692 KIF12Q96FN5 646 aa12.72□□□□□ -0.37
TMEM38B-202ENST00000374692 RPGRIP1Q96KN7 1286 aa12.72□□□□□ -0.37
TMEM38B-202ENST00000374692 CHST7Q9NS84 486 aa12.72□□□□□ -0.37
TMEM38B-202ENST00000374692 ADAMTS5Q9UNA0 930 aa12.72□□□□□ -0.37
TMEM38B-202ENST00000374692 SNX9Q9Y5X1 595 aa12.72□□□□□ -0.37
TMEM38B-202ENST00000374692 F8VP50 259 aa12.72□□□□□ -0.37
TMEM38B-202ENST00000374692 C6orf222P0C671 652 aaPredicted RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms