RNA–Protein interactions for RNA: ENST00000374116.3

HMGA1-203, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-203ENST00000374116 GTPBP10A4D1E9 387 aaKnown RBP15.37■□□□□ 0.05
HMGA1-203ENST00000374116 CCDC169A6NNP5 214 aa15.37■□□□□ 0.05
HMGA1-203ENST00000374116 MOCS3O95396 460 aa15.37■□□□□ 0.05
HMGA1-203ENST00000374116 SLC34A2O95436 690 aa15.37■□□□□ 0.05
HMGA1-203ENST00000374116 BRD2P25440 801 aaKnown RBP15.37■□□□□ 0.05
HMGA1-203ENST00000374116 CASP4P49662 377 aa15.37■□□□□ 0.05
HMGA1-203ENST00000374116 NFX1Q12986 1120 aaKnown RBP15.37■□□□□ 0.05
HMGA1-203ENST00000374116 LPIN1Q14693 890 aa15.37■□□□□ 0.05
HMGA1-203ENST00000374116 EXOC3L4Q17RC7 722 aa15.37■□□□□ 0.05
HMGA1-203ENST00000374116 ODR4Q5SWX8 454 aa15.37■□□□□ 0.05
HMGA1-203ENST00000374116 SLC35C1Q96A29 364 aa15.37■□□□□ 0.05
HMGA1-203ENST00000374116 NOX5Q96PH1 765 aa15.37■□□□□ 0.05
HMGA1-203ENST00000374116 MKNK1Q9BUB5 465 aa15.37■□□□□ 0.05
HMGA1-203ENST00000374116 FBXL5Q9UKA1 691 aa15.37■□□□□ 0.05
HMGA1-203ENST00000374116 NOC2LQ9Y3T9 749 aaKnown RBP15.37■□□□□ 0.05
HMGA1-203ENST00000374116 PCDHB13Q9Y5F0 798 aa15.37■□□□□ 0.05
HMGA1-203ENST00000374116 BZW2Q9Y6E2 419 aaKnown RBP15.37■□□□□ 0.05
HMGA1-203ENST00000374116 MYH10P35580 1976 aa15.37■□□□□ 0.05
HMGA1-203ENST00000374116 TARSL2A2RTX5 802 aaKnown RBP15.36■□□□□ 0.05
HMGA1-203ENST00000374116 GAS2O43903 313 aaKnown RBP15.36■□□□□ 0.05
HMGA1-203ENST00000374116 ERLIN2O94905 339 aa15.36■□□□□ 0.05
HMGA1-203ENST00000374116 CD52P31358 61 aa15.36■□□□□ 0.05
HMGA1-203ENST00000374116 MAGEA10P43363 369 aaPredicted RBP15.36■□□□□ 0.05
HMGA1-203ENST00000374116 KLHL30Q0D2K2 578 aa15.36■□□□□ 0.05
HMGA1-203ENST00000374116 SLC18A3Q16572 532 aa15.36■□□□□ 0.05
HMGA1-203ENST00000374116 FBXO47Q5MNV8 452 aa15.36■□□□□ 0.05
HMGA1-203ENST00000374116 KLHDC7AQ5VTJ3 777 aa15.36■□□□□ 0.05
HMGA1-203ENST00000374116 C16orf59Q7L2K0 433 aa15.36■□□□□ 0.05
HMGA1-203ENST00000374116 SLC9A9Q8IVB4 645 aa15.36■□□□□ 0.05
HMGA1-203ENST00000374116 EXOC8Q8IYI6 725 aa15.36■□□□□ 0.05
HMGA1-203ENST00000374116 CEP120Q8N960 986 aa15.36■□□□□ 0.05
HMGA1-203ENST00000374116 CAPZA3Q96KX2 299 aa15.36■□□□□ 0.05
HMGA1-203ENST00000374116 TIPINQ9BVW5 301 aa15.36■□□□□ 0.05
HMGA1-203ENST00000374116 IKZF4Q9H2S9 585 aa15.36■□□□□ 0.05
HMGA1-203ENST00000374116 CLIC2O15247 247 aa15.36■□□□□ 0.05
HMGA1-203ENST00000374116 SLC16A4O15374 487 aa15.36■□□□□ 0.05
HMGA1-203ENST00000374116 TCP1P17987 556 aaKnown RBP15.36■□□□□ 0.05
HMGA1-203ENST00000374116 IBSPP21815 317 aaPredicted RBP15.36■□□□□ 0.05
HMGA1-203ENST00000374116 PON1P27169 355 aa15.36■□□□□ 0.05
HMGA1-203ENST00000374116 PSMC2P35998 433 aaKnown RBP15.36■□□□□ 0.05
HMGA1-203ENST00000374116 NPTX2P47972 431 aa15.36■□□□□ 0.05
HMGA1-203ENST00000374116 CRYBB1P53674 252 aaPredicted RBP15.36■□□□□ 0.05
HMGA1-203ENST00000374116 VSNL1P62760 191 aa15.36■□□□□ 0.05
HMGA1-203ENST00000374116 ITIH3Q06033 890 aa15.36■□□□□ 0.05
HMGA1-203ENST00000374116 MYBPC2Q14324 1141 aa15.36■□□□□ 0.05
HMGA1-203ENST00000374116 MXD4Q14582 209 aaPredicted RBP15.36■□□□□ 0.05
HMGA1-203ENST00000374116 FAM26DQ5JW98 314 aa15.36■□□□□ 0.05
HMGA1-203ENST00000374116 C10orf76Q5T2E6 689 aa15.36■□□□□ 0.05
HMGA1-203ENST00000374116 GBP6Q6ZN66 633 aa15.36■□□□□ 0.05
HMGA1-203ENST00000374116 ZNF572Q7Z3I7 529 aaPredicted RBP15.36■□□□□ 0.05
HMGA1-203ENST00000374116 CNPY4Q8N129 248 aa15.36■□□□□ 0.05
HMGA1-203ENST00000374116 TMEM199Q8N511 208 aa15.36■□□□□ 0.05
HMGA1-203ENST00000374116 DBF4BQ8NFT6 615 aa15.36■□□□□ 0.05
HMGA1-203ENST00000374116 KIFAP3Q92845 792 aa15.36■□□□□ 0.05
HMGA1-203ENST00000374116 ST6GALNAC4Q9H4F1 302 aa15.36■□□□□ 0.05
HMGA1-203ENST00000374116 INO80B-WBP1J3KQ70 363 aa15.35■□□□□ 0.05
HMGA1-203ENST00000374116 UCHL3P15374 230 aa15.35■□□□□ 0.05
HMGA1-203ENST00000374116 SLC9A1P19634 815 aa15.35■□□□□ 0.05
HMGA1-203ENST00000374116 EIF4BP23588 611 aaKnown RBP15.35■□□□□ 0.05
HMGA1-203ENST00000374116 ANXA13P27216 316 aa15.35■□□□□ 0.05
HMGA1-203ENST00000374116 APBA1Q02410 837 aa15.35■□□□□ 0.05
HMGA1-203ENST00000374116 FPGSQ05932 587 aa15.35■□□□□ 0.05
HMGA1-203ENST00000374116 ALCAMQ13740 583 aa15.35■□□□□ 0.05
HMGA1-203ENST00000374116 DCAF17Q5H9S7 520 aaPredicted RBP15.35■□□□□ 0.05
HMGA1-203ENST00000374116 OTOP2Q7RTS6 562 aa15.35■□□□□ 0.05
HMGA1-203ENST00000374116 FAM228AQ86W67 206 aa15.35■□□□□ 0.05
HMGA1-203ENST00000374116 CDR2LQ86X02 465 aaPredicted RBP15.35■□□□□ 0.05
HMGA1-203ENST00000374116 GPATCH11Q8N954 259 aa15.35■□□□□ 0.05
HMGA1-203ENST00000374116 IFT74Q96LB3 600 aa15.35■□□□□ 0.05
HMGA1-203ENST00000374116 LBHD1Q9BQE6 289 aaPredicted RBP15.35■□□□□ 0.05
HMGA1-203ENST00000374116 INO80BQ9C086 356 aaPredicted RBP15.35■□□□□ 0.05
HMGA1-203ENST00000374116 AGPAT3Q9NRZ7 376 aa15.35■□□□□ 0.05
HMGA1-203ENST00000374116 HYOU1Q9Y4L1 999 aa15.35■□□□□ 0.05
HMGA1-203ENST00000374116 TTLL13PA6NNM8 815 aa15.34■□□□□ 0.05
HMGA1-203ENST00000374116 RNF40O75150 1001 aa15.34■□□□□ 0.05
HMGA1-203ENST00000374116 SYF2O95926 243 aaKnown RBP15.34■□□□□ 0.05
HMGA1-203ENST00000374116 EDN1P05305 212 aa15.34■□□□□ 0.05
HMGA1-203ENST00000374116 PLS3P13797 630 aa15.34■□□□□ 0.05
HMGA1-203ENST00000374116 DARSP14868 501 aaKnown RBP15.34■□□□□ 0.05
HMGA1-203ENST00000374116 DMP1Q13316 513 aaPredicted RBP15.34■□□□□ 0.05
HMGA1-203ENST00000374116 NAB2Q15742 525 aa15.34■□□□□ 0.05
HMGA1-203ENST00000374116 TCERG1LQ5VWI1 586 aa15.34■□□□□ 0.05
HMGA1-203ENST00000374116 HS2ST1Q7LGA3 356 aa15.34■□□□□ 0.05
HMGA1-203ENST00000374116 CREG2Q8IUH2 290 aa15.34■□□□□ 0.05
HMGA1-203ENST00000374116 GPIHBP1Q8IV16 184 aa15.34■□□□□ 0.05
HMGA1-203ENST00000374116 FAM186BQ8IYM0 893 aa15.34■□□□□ 0.05
HMGA1-203ENST00000374116 DEPTORQ8TB45 409 aa15.34■□□□□ 0.05
HMGA1-203ENST00000374116 SPAG5Q96R06 1193 aa15.34■□□□□ 0.05
HMGA1-203ENST00000374116 KMT5AQ9NQR1 393 aa15.34■□□□□ 0.05
HMGA1-203ENST00000374116 LARSQ9P2J5 1176 aaKnown RBP15.34■□□□□ 0.05
HMGA1-203ENST00000374116 PADI3Q9ULW8 664 aa15.34■□□□□ 0.05
HMGA1-203ENST00000374116 ST3GAL5Q9UNP4 418 aa15.34■□□□□ 0.05
HMGA1-203ENST00000374116 ZNF185O15231 689 aa15.33■□□□□ 0.05
HMGA1-203ENST00000374116 B4GALT5O43286 388 aa15.33■□□□□ 0.05
HMGA1-203ENST00000374116 CAND2O75155 1236 aa15.33■□□□□ 0.05
HMGA1-203ENST00000374116 ACTN1P12814 892 aa15.33■□□□□ 0.05
HMGA1-203ENST00000374116 MCCD1P59942 119 aaPredicted RBP15.33■□□□□ 0.05
HMGA1-203ENST00000374116 PTENP60484 403 aa15.33■□□□□ 0.05
HMGA1-203ENST00000374116 IRF2BP2Q7Z5L9 587 aa15.33■□□□□ 0.05
HMGA1-203ENST00000374116 MICALL1Q8N3F8 863 aa15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms