RNA–Protein interactions for RNA: ENST00000373672.7

COL16A1-203, Transcript of collagen type XVI alpha 1 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL16A1, Length 5,736 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-203ENST00000373672 RAB42Q8N4Z0 105 aa18.96■□□□□ 0.63
COL16A1-203ENST00000373672 OR6J1Q8NGC5 347 aa18.96■□□□□ 0.63
COL16A1-203ENST00000373672 ZCCHC11Q5TAX3 1644 aaKnown RBP18.96■□□□□ 0.63
COL16A1-203ENST00000373672 GOLGA8RI6L899 631 aa18.96■□□□□ 0.63
COL16A1-203ENST00000373672 SNRNP35Q16560 246 aaKnown RBP18.96■□□□□ 0.63
COL16A1-203ENST00000373672 UGP2Q16851 508 aa18.96■□□□□ 0.63
COL16A1-203ENST00000373672 CATSPER3Q86XQ3 398 aa18.96■□□□□ 0.63
COL16A1-203ENST00000373672 KRT35Q92764 455 aa18.96■□□□□ 0.63
COL16A1-203ENST00000373672 ZC3H7BQ9UGR2 993 aaKnown RBP18.96■□□□□ 0.63
COL16A1-203ENST00000373672 A0A1W2PQJ5 194 aa18.96■□□□□ 0.63
COL16A1-203ENST00000373672 PDGFRAP16234 1089 aa18.96■□□□□ 0.63
COL16A1-203ENST00000373672 EDRF1Q3B7T1 1238 aa18.96■□□□□ 0.63
COL16A1-203ENST00000373672 E4F1Q66K89 784 aaPredicted RBP18.96■□□□□ 0.63
COL16A1-203ENST00000373672 RBBP8NLQ8NC74 664 aaPredicted RBP18.96■□□□□ 0.63
COL16A1-203ENST00000373672 DCUN1D1Q96GG9 259 aa18.96■□□□□ 0.63
COL16A1-203ENST00000373672 KCNF1Q9H3M0 494 aa18.96■□□□□ 0.63
COL16A1-203ENST00000373672 AURKCQ9UQB9 309 aa18.96■□□□□ 0.63
COL16A1-203ENST00000373672 MEFVO15553 781 aaPredicted RBP18.95■□□□□ 0.62
COL16A1-203ENST00000373672 HLA-DPA1P20036 260 aa18.95■□□□□ 0.62
COL16A1-203ENST00000373672 MTMR2Q13614 643 aa18.95■□□□□ 0.62
COL16A1-203ENST00000373672 ANO4Q32M45 955 aa18.95■□□□□ 0.62
COL16A1-203ENST00000373672 TMEM117Q9H0C3 514 aa18.95■□□□□ 0.62
COL16A1-203ENST00000373672 NEU2Q9Y3R4 380 aa18.95■□□□□ 0.62
COL16A1-203ENST00000373672 CROCC2H7BZ55 1655 aa18.95■□□□□ 0.62
COL16A1-203ENST00000373672 HMOX2P30519 316 aa18.95■□□□□ 0.62
COL16A1-203ENST00000373672 HMGCS2P54868 508 aa18.95■□□□□ 0.62
COL16A1-203ENST00000373672 DAB2P98082 770 aa18.95■□□□□ 0.62
COL16A1-203ENST00000373672 KDSRQ06136 332 aa18.95■□□□□ 0.62
COL16A1-203ENST00000373672 NCOA4Q13772 614 aa18.95■□□□□ 0.62
COL16A1-203ENST00000373672 TMEM132DQ14C87 1099 aa18.95■□□□□ 0.62
COL16A1-203ENST00000373672 LONRF1Q17RB8 773 aa18.95■□□□□ 0.62
COL16A1-203ENST00000373672 DYRK4Q9NR20 520 aa18.95■□□□□ 0.62
COL16A1-203ENST00000373672 STX3Q13277 289 aa18.95■□□□□ 0.62
COL16A1-203ENST00000373672 PDAP1Q13442 181 aaKnown RBP18.95■□□□□ 0.62
COL16A1-203ENST00000373672 RRM2BQ7LG56 351 aa18.95■□□□□ 0.62
COL16A1-203ENST00000373672 MCEEQ96PE7 176 aa18.95■□□□□ 0.62
COL16A1-203ENST00000373672 FOXP3Q9BZS1 431 aa18.95■□□□□ 0.62
COL16A1-203ENST00000373672 FAM205CA6NFA0 338 aa18.95■□□□□ 0.62
COL16A1-203ENST00000373672 LAMB3Q13751 1172 aa18.95■□□□□ 0.62
COL16A1-203ENST00000373672 SGSM3Q96HU1 749 aa18.95■□□□□ 0.62
COL16A1-203ENST00000373672 DAGLAQ9Y4D2 1042 aa18.95■□□□□ 0.62
COL16A1-203ENST00000373672 RASSF10A6NK89 507 aa18.95■□□□□ 0.62
COL16A1-203ENST00000373672 AGGF1Q8N302 714 aaeCLIP18.95■□□□□ 0.62
COL16A1-203ENST00000373672 ATPAF2Q8N5M1 289 aa18.95■□□□□ 0.62
COL16A1-203ENST00000373672 PIDD1Q9HB75 910 aa18.95■□□□□ 0.62
COL16A1-203ENST00000373672 KDM6AO15550 1401 aaPredicted RBP18.94■□□□□ 0.62
COL16A1-203ENST00000373672 ARHGEF9O43307 516 aa18.94■□□□□ 0.62
COL16A1-203ENST00000373672 TRAPPC3O43617 180 aa18.94■□□□□ 0.62
COL16A1-203ENST00000373672 TLR2O60603 784 aa18.94■□□□□ 0.62
COL16A1-203ENST00000373672 MYBP10242 640 aa18.94■□□□□ 0.62
COL16A1-203ENST00000373672 ACOT2P49753 483 aa18.94■□□□□ 0.62
COL16A1-203ENST00000373672 CCNI2Q6ZMN8 369 aaPredicted RBP18.94■□□□□ 0.62
COL16A1-203ENST00000373672 ANKS3Q6ZW76 656 aa18.94■□□□□ 0.62
COL16A1-203ENST00000373672 SYNDIG1LA6NDD5 238 aa18.94■□□□□ 0.62
COL16A1-203ENST00000373672 ZNF200P98182 395 aaPredicted RBP18.94■□□□□ 0.62
COL16A1-203ENST00000373672 RABGAP1LQ5R372 815 aa18.94■□□□□ 0.62
COL16A1-203ENST00000373672 LPAR1Q92633 364 aa18.94■□□□□ 0.62
COL16A1-203ENST00000373672 TMEM143Q96AN5 459 aa18.94■□□□□ 0.62
COL16A1-203ENST00000373672 ZNF512BQ96KM6 892 aaPredicted RBP18.94■□□□□ 0.62
COL16A1-203ENST00000373672 NYAP2Q9P242 653 aa18.94■□□□□ 0.62
COL16A1-203ENST00000373672 USP15Q9Y4E8 981 aaPredicted RBP18.94■□□□□ 0.62
COL16A1-203ENST00000373672 EIF3DO15371 548 aaKnown RBP eCLIP18.94■□□□□ 0.62
COL16A1-203ENST00000373672 ZSCAN9O15535 394 aaPredicted RBP18.94■□□□□ 0.62
COL16A1-203ENST00000373672 APRTP07741 180 aa18.94■□□□□ 0.62
COL16A1-203ENST00000373672 VCPP55072 806 aaKnown RBP18.94■□□□□ 0.62
COL16A1-203ENST00000373672 SNRPFP62306 86 aaKnown RBP18.94■□□□□ 0.62
COL16A1-203ENST00000373672 MARCH10Q8NA82 808 aaPredicted RBP18.94■□□□□ 0.62
COL16A1-203ENST00000373672 ELMO2Q96JJ3 720 aa18.94■□□□□ 0.62
COL16A1-203ENST00000373672 ARHGEF38Q9NXL2 777 aa18.94■□□□□ 0.62
COL16A1-203ENST00000373672 TUBE1Q9UJT0 475 aa18.94■□□□□ 0.62
COL16A1-203ENST00000373672 TULP4Q9NRJ4 1543 aa18.94■□□□□ 0.62
COL16A1-203ENST00000373672 MYMKA6NI61 221 aa18.94■□□□□ 0.62
COL16A1-203ENST00000373672 EIF3HO15372 352 aaKnown RBP eCLIP18.94■□□□□ 0.629e-8■■□□□ 13.2
COL16A1-203ENST00000373672 CACNB2Q08289 660 aaPredicted RBP18.94■□□□□ 0.62
COL16A1-203ENST00000373672 LONP2Q86WA8 852 aa18.94■□□□□ 0.62
COL16A1-203ENST00000373672 MFN1Q8IWA4 741 aa18.94■□□□□ 0.62
COL16A1-203ENST00000373672 PPP1R2P1Q96PQ5 205 aa18.94■□□□□ 0.62
COL16A1-203ENST00000373672 NPHS2Q9NP85 383 aa18.94■□□□□ 0.62
COL16A1-203ENST00000373672 AGPAT5Q9NUQ2 364 aa18.94■□□□□ 0.62
COL16A1-203ENST00000373672 CDV3Q9UKY7 258 aaKnown RBP18.94■□□□□ 0.62
COL16A1-203ENST00000373672 SNX9Q9Y5X1 595 aa18.94■□□□□ 0.62
COL16A1-203ENST00000373672 STXBP3O00186 592 aa18.93■□□□□ 0.62
COL16A1-203ENST00000373672 MED21Q13503 144 aa18.93■□□□□ 0.62
COL16A1-203ENST00000373672 COG2Q14746 738 aa18.93■□□□□ 0.62
COL16A1-203ENST00000373672 KIF2CQ99661 725 aa18.93■□□□□ 0.62
COL16A1-203ENST00000373672 RAB6BQ9NRW1 208 aa18.93■□□□□ 0.62
COL16A1-203ENST00000373672 NSMCE4AQ9NXX6 385 aa18.93■□□□□ 0.62
COL16A1-203ENST00000373672 CLTCL1P53675 1640 aa18.93■□□□□ 0.62
COL16A1-203ENST00000373672 NBPF26B4DH59 902 aa18.93■□□□□ 0.62
COL16A1-203ENST00000373672 RFC5P40937 340 aa18.93■□□□□ 0.62
COL16A1-203ENST00000373672 NFIXQ14938 502 aa18.93■□□□□ 0.62
COL16A1-203ENST00000373672 KDELC2Q7Z4H8 507 aa18.93■□□□□ 0.62
COL16A1-203ENST00000373672 NBPF15Q8N660 670 aa18.93■□□□□ 0.62
COL16A1-203ENST00000373672 FHOD1Q9Y613 1164 aa18.93■□□□□ 0.62
COL16A1-203ENST00000373672 SMAPO00193 183 aa18.93■□□□□ 0.62
COL16A1-203ENST00000373672 EEF2KO00418 725 aaKnown RBP18.93■□□□□ 0.62
COL16A1-203ENST00000373672 EFCAB14O75071 495 aa18.93■□□□□ 0.62
COL16A1-203ENST00000373672 SUPT3HO75486 399 aa18.93■□□□□ 0.62
COL16A1-203ENST00000373672 SPAG6O75602 509 aa18.93■□□□□ 0.62
COL16A1-203ENST00000373672 EMC2Q15006 297 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms