RNA–Protein interactions for RNA: ENST00000373554.5

HDAC8-201, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 833 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-201ENST00000373554 FAM213AQ9BRX8 229 aa13.06□□□□□ -0.32
HDAC8-201ENST00000373554 TTPALQ9BTX7 342 aa13.06□□□□□ -0.32
HDAC8-201ENST00000373554 ASB7Q9H672 318 aa13.06□□□□□ -0.32
HDAC8-201ENST00000373554 SLC39A2Q9NP94 309 aa13.06□□□□□ -0.32
HDAC8-201ENST00000373554 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.06□□□□□ -0.32
HDAC8-201ENST00000373554 CHST7Q9NS84 486 aa13.06□□□□□ -0.32
HDAC8-201ENST00000373554 CD207Q9UJ71 328 aa13.06□□□□□ -0.32
HDAC8-201ENST00000373554 NUB1Q9Y5A7 615 aa13.06□□□□□ -0.32
HDAC8-201ENST00000373554 BRWD1Q9NSI6 2320 aa13.05□□□□□ -0.32
HDAC8-201ENST00000373554 KLRC4O43908 158 aa13.05□□□□□ -0.32
HDAC8-201ENST00000373554 IL18RAPO95256 599 aa13.05□□□□□ -0.32
HDAC8-201ENST00000373554 ADRB2P07550 413 aa13.05□□□□□ -0.32
HDAC8-201ENST00000373554 CNPP09543 421 aaKnown RBP13.05□□□□□ -0.32
HDAC8-201ENST00000373554 CYP3A5P20815 502 aa13.05□□□□□ -0.32
HDAC8-201ENST00000373554 KLRC2P26717 231 aa13.05□□□□□ -0.32
HDAC8-201ENST00000373554 HOXD11P31277 338 aaPredicted RBP13.05□□□□□ -0.32
HDAC8-201ENST00000373554 SNRPFP62306 86 aaKnown RBP13.05□□□□□ -0.32
HDAC8-201ENST00000373554 RBM10P98175 930 aaKnown RBP13.05□□□□□ -0.32
HDAC8-201ENST00000373554 KCNC3Q14003 757 aa13.05□□□□□ -0.32
HDAC8-201ENST00000373554 TMEM132DQ14C87 1099 aa13.05□□□□□ -0.32
HDAC8-201ENST00000373554 CLUL1Q15846 466 aa13.05□□□□□ -0.32
HDAC8-201ENST00000373554 BMT2Q1RMZ1 405 aa13.05□□□□□ -0.32
HDAC8-201ENST00000373554 RTP2Q5QGT7 225 aa13.05□□□□□ -0.32
HDAC8-201ENST00000373554 KIAA0319Q5VV43 1072 aa13.05□□□□□ -0.32
HDAC8-201ENST00000373554 JADE1Q6IE81 842 aa13.05□□□□□ -0.32
HDAC8-201ENST00000373554 PDXDC1Q6P996 788 aa13.05□□□□□ -0.32
HDAC8-201ENST00000373554 TMEM184AQ6ZMB5 413 aa13.05□□□□□ -0.32
HDAC8-201ENST00000373554 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.05□□□□□ -0.32
HDAC8-201ENST00000373554 CEP57Q86XR8 500 aa13.05□□□□□ -0.32
HDAC8-201ENST00000373554 FMR1NBQ8N0W7 255 aaPredicted RBP13.05□□□□□ -0.32
HDAC8-201ENST00000373554 GPD1LQ8N335 351 aa13.05□□□□□ -0.32
HDAC8-201ENST00000373554 C3orf58Q8NDZ4 430 aa13.05□□□□□ -0.32
HDAC8-201ENST00000373554 BEST2Q8NFU1 509 aa13.05□□□□□ -0.32
HDAC8-201ENST00000373554 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.05□□□□□ -0.32
HDAC8-201ENST00000373554 NOC3LQ8WTT2 800 aaKnown RBP13.05□□□□□ -0.32
HDAC8-201ENST00000373554 KLHL5Q96PQ7 755 aa13.05□□□□□ -0.32
HDAC8-201ENST00000373554 RBAKQ9NYW8 714 aaPredicted RBP13.05□□□□□ -0.32
HDAC8-201ENST00000373554 CLEC1BQ9P126 229 aa13.05□□□□□ -0.32
HDAC8-201ENST00000373554 DERAQ9Y315 318 aa13.05□□□□□ -0.32
HDAC8-201ENST00000373554 C2CD2Q9Y426 696 aa13.05□□□□□ -0.32
HDAC8-201ENST00000373554 PDCD11Q14690 1871 aaKnown RBP13.04□□□□□ -0.32
HDAC8-201ENST00000373554 TRIP11Q15643 1979 aa13.04□□□□□ -0.32
HDAC8-201ENST00000373554 SPDYE4A6NLX3 237 aa13.04□□□□□ -0.32
HDAC8-201ENST00000373554 TULP1O00294 542 aaPredicted RBP13.04□□□□□ -0.32
HDAC8-201ENST00000373554 TEX28O15482 410 aa13.04□□□□□ -0.32
HDAC8-201ENST00000373554 EXTL3O43909 919 aa13.04□□□□□ -0.32
HDAC8-201ENST00000373554 LILRB3O75022 631 aa13.04□□□□□ -0.32
HDAC8-201ENST00000373554 NFICP08651 508 aa13.04□□□□□ -0.32
HDAC8-201ENST00000373554 PRR29P0C7W0 189 aa13.04□□□□□ -0.32
HDAC8-201ENST00000373554 BMP1P13497 986 aa13.04□□□□□ -0.32
HDAC8-201ENST00000373554 HOXB8P17481 243 aaPredicted RBP13.04□□□□□ -0.32
HDAC8-201ENST00000373554 LRPAP1P30533 357 aa13.04□□□□□ -0.32
HDAC8-201ENST00000373554 MCM4P33991 863 aa13.04□□□□□ -0.32
HDAC8-201ENST00000373554 HOXD13P35453 343 aa13.04□□□□□ -0.32
HDAC8-201ENST00000373554 DPYDQ12882 1025 aa13.04□□□□□ -0.32
HDAC8-201ENST00000373554 STK4Q13043 487 aa13.04□□□□□ -0.32
HDAC8-201ENST00000373554 SMAD4Q13485 552 aaKnown RBP13.04□□□□□ -0.32
HDAC8-201ENST00000373554 ZBTB6Q15916 424 aa13.04□□□□□ -0.32
HDAC8-201ENST00000373554 ANKRD54Q6NXT1 300 aa13.04□□□□□ -0.32
HDAC8-201ENST00000373554 ELMSAN1Q6PJG2 1045 aa13.04□□□□□ -0.32
HDAC8-201ENST00000373554 CRELD2Q6UXH1 353 aaPredicted RBP13.04□□□□□ -0.32
HDAC8-201ENST00000373554 BRSK2Q8IWQ3 736 aa13.04□□□□□ -0.32
HDAC8-201ENST00000373554 SMRP1Q8NCR6 262 aa13.04□□□□□ -0.32
HDAC8-201ENST00000373554 ADAMTS19Q8TE59 1207 aa13.04□□□□□ -0.32
HDAC8-201ENST00000373554 PIK3R5Q8WYR1 880 aa13.04□□□□□ -0.32
HDAC8-201ENST00000373554 MSLNLQ96KJ4 702 aa13.04□□□□□ -0.32
HDAC8-201ENST00000373554 PCIF1Q9H4Z3 704 aa13.04□□□□□ -0.32
HDAC8-201ENST00000373554 RXFP1Q9HBX9 757 aa13.04□□□□□ -0.32
HDAC8-201ENST00000373554 KIAA1586Q9HCI6 787 aa13.04□□□□□ -0.32
HDAC8-201ENST00000373554 AGPAT3Q9NRZ7 376 aa13.04□□□□□ -0.32
HDAC8-201ENST00000373554 DZANK1Q9NVP4 752 aa13.04□□□□□ -0.32
HDAC8-201ENST00000373554 HSPBP1Q9NZL4 362 aa13.04□□□□□ -0.32
HDAC8-201ENST00000373554 CGNQ9P2M7 1197 aaKnown RBP13.04□□□□□ -0.32
HDAC8-201ENST00000373554 HOOK1Q9UJC3 728 aaKnown RBP13.04□□□□□ -0.32
HDAC8-201ENST00000373554 XIRP2A4UGR9 3374 aa13.04□□□□□ -0.32
HDAC8-201ENST00000373554 SPTBN5Q9NRC6 3674 aaKnown RBP13.03□□□□□ -0.32
HDAC8-201ENST00000373554 CACNA1AO00555 2505 aa13.03□□□□□ -0.32
HDAC8-201ENST00000373554 GOLGA8IPA6NC78 632 aa13.03□□□□□ -0.32
HDAC8-201ENST00000373554 GRXCR2A6NFK2 248 aa13.03□□□□□ -0.32
HDAC8-201ENST00000373554 GOLGA8JA6NMD2 632 aa13.03□□□□□ -0.32
HDAC8-201ENST00000373554 I3L4J1 428 aa13.03□□□□□ -0.32
HDAC8-201ENST00000373554 RHOBTB3O94955 611 aa13.03□□□□□ -0.32
HDAC8-201ENST00000373554 KIF20AO95235 890 aa13.03□□□□□ -0.32
HDAC8-201ENST00000373554 GLUD1P00367 558 aa13.03□□□□□ -0.32
HDAC8-201ENST00000373554 EPCAMP16422 314 aa13.03□□□□□ -0.32
HDAC8-201ENST00000373554 FGFR3P22607 806 aa13.03□□□□□ -0.32
HDAC8-201ENST00000373554 BRCC3P46736 316 aa13.03□□□□□ -0.32
HDAC8-201ENST00000373554 CLCN4P51793 760 aa13.03□□□□□ -0.32
HDAC8-201ENST00000373554 PSMD5Q16401 504 aa13.03□□□□□ -0.32
HDAC8-201ENST00000373554 KNOP1Q1ED39 458 aaKnown RBP13.03□□□□□ -0.32
HDAC8-201ENST00000373554 SPATA1Q5VX52 437 aa13.03□□□□□ -0.32
HDAC8-201ENST00000373554 PRSS55Q6UWB4 352 aaPredicted RBP13.03□□□□□ -0.32
HDAC8-201ENST00000373554 ANKS3Q6ZW76 656 aa13.03□□□□□ -0.32
HDAC8-201ENST00000373554 NT5DC4Q86YG4 428 aa13.03□□□□□ -0.32
HDAC8-201ENST00000373554 KIAA0895Q8NCT3 520 aa13.03□□□□□ -0.32
HDAC8-201ENST00000373554 GOLGA5Q8TBA6 731 aa13.03□□□□□ -0.32
HDAC8-201ENST00000373554 FNIP2Q9P278 1114 aa13.03□□□□□ -0.32
HDAC8-201ENST00000373554 DPP7Q9UHL4 492 aa13.03□□□□□ -0.32
HDAC8-201ENST00000373554 ZNF233A6NK53 670 aa13.02□□□□□ -0.33
HDAC8-201ENST00000373554 SYN3O14994 580 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms