RNA–Protein interactions for RNA: ENST00000373316.4

PGK1-201, Transcript of phosphoglycerate kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGK1, Length 4,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-201ENST00000373316 DNAJC17Q9NVM6 304 aaKnown RBP11.21□□□□□ -0.61
PGK1-201ENST00000373316 PSMC3IPQ9P2W1 217 aaPredicted RBP11.21□□□□□ -0.61
PGK1-201ENST00000373316 MTO1Q9Y2Z2 717 aaKnown RBP11.21□□□□□ -0.61
PGK1-201ENST00000373316 CCND1P24385 295 aa11.21□□□□□ -0.62
PGK1-201ENST00000373316 GCLMP48507 274 aa11.21□□□□□ -0.62
PGK1-201ENST00000373316 TNIP3Q96KP6 325 aa11.21□□□□□ -0.62
PGK1-201ENST00000373316 TGS1Q96RS0 853 aaKnown RBP11.21□□□□□ -0.62
PGK1-201ENST00000373316 ERP44Q9BS26 406 aa11.21□□□□□ -0.62
PGK1-201ENST00000373316 GGA2Q9UJY4 613 aa11.21□□□□□ -0.62
PGK1-201ENST00000373316 CPSF3Q9UKF6 684 aaKnown RBP11.21□□□□□ -0.62
PGK1-201ENST00000373316 GOLGA8SH3BPF8 625 aa11.2□□□□□ -0.62
PGK1-201ENST00000373316 EXTL3O43909 919 aa11.2□□□□□ -0.62
PGK1-201ENST00000373316 SLC25A27O95847 323 aa11.2□□□□□ -0.62
PGK1-201ENST00000373316 TOB1P50616 345 aaPredicted RBP11.2□□□□□ -0.62
PGK1-201ENST00000373316 ZBTB17Q13105 803 aa11.2□□□□□ -0.62
PGK1-201ENST00000373316 SEPT14Q6ZU15 432 aa11.2□□□□□ -0.62
PGK1-201ENST00000373316 FAM205AQ6ZU69 1335 aa11.2□□□□□ -0.62
PGK1-201ENST00000373316 LDHDQ86WU2 507 aa11.2□□□□□ -0.62
PGK1-201ENST00000373316 DNAAF3Q8N9W5 541 aa11.2□□□□□ -0.62
PGK1-201ENST00000373316 ZNF473Q8WTR7 871 aaKnown RBP11.2□□□□□ -0.62
PGK1-201ENST00000373316 VCPKMTQ9H867 229 aa11.2□□□□□ -0.62
PGK1-201ENST00000373316 OLFML3Q9NRN5 406 aa11.2□□□□□ -0.62
PGK1-201ENST00000373316 TPX2Q9ULW0 747 aaKnown RBP11.2□□□□□ -0.62
PGK1-201ENST00000373316 FOXN1O15353 648 aa11.2□□□□□ -0.62
PGK1-201ENST00000373316 MYCNP04198 464 aaPredicted RBP11.2□□□□□ -0.62
PGK1-201ENST00000373316 FCER1AP12319 257 aa11.2□□□□□ -0.62
PGK1-201ENST00000373316 EIF2AK2P19525 551 aaKnown RBP11.2□□□□□ -0.62
PGK1-201ENST00000373316 GARTP22102 1010 aa11.2□□□□□ -0.62
PGK1-201ENST00000373316 TBC1D10BQ4KMP7 808 aaPredicted RBP11.2□□□□□ -0.62
PGK1-201ENST00000373316 LRRC1Q9BTT6 524 aa11.2□□□□□ -0.62
PGK1-201ENST00000373316 EML4Q9HC35 981 aaKnown RBP11.2□□□□□ -0.62
PGK1-201ENST00000373316 RBAKQ9NYW8 714 aaPredicted RBP11.2□□□□□ -0.62
PGK1-201ENST00000373316 SEPT10Q9P0V9 454 aa11.2□□□□□ -0.62
PGK1-201ENST00000373316 DBR1Q9UK59 544 aaKnown RBP11.2□□□□□ -0.62
PGK1-201ENST00000373316 USP15Q9Y4E8 981 aaPredicted RBP11.2□□□□□ -0.62
PGK1-201ENST00000373316 LRRC10BA6NIK2 292 aa11.2□□□□□ -0.62
PGK1-201ENST00000373316 APOA4P06727 396 aa11.2□□□□□ -0.62
PGK1-201ENST00000373316 GHRP10912 638 aa11.2□□□□□ -0.62
PGK1-201ENST00000373316 HOXA13P31271 388 aaPredicted RBP11.2□□□□□ -0.62
PGK1-201ENST00000373316 GALCP54803 685 aa11.2□□□□□ -0.62
PGK1-201ENST00000373316 KRT17Q04695 432 aa11.2□□□□□ -0.62
PGK1-201ENST00000373316 USP17L6PQ6QN14 398 aa11.2□□□□□ -0.62
PGK1-201ENST00000373316 SLC35G2Q8TBE7 412 aa11.2□□□□□ -0.62
PGK1-201ENST00000373316 XPO6Q96QU8 1125 aaKnown RBP11.2□□□□□ -0.62
PGK1-201ENST00000373316 YY1AP1Q9H869 796 aa11.2□□□□□ -0.62
PGK1-201ENST00000373316 RSAD1Q9HA92 442 aa11.2□□□□□ -0.62
PGK1-201ENST00000373316 PAK5Q9P286 719 aa11.2□□□□□ -0.62
PGK1-201ENST00000373316 GAKO14976 1311 aa11.2□□□□□ -0.62
PGK1-201ENST00000373316 ARHGAP10A1A4S6 786 aa11.2□□□□□ -0.62
PGK1-201ENST00000373316 HSPA4LO95757 839 aa11.2□□□□□ -0.62
PGK1-201ENST00000373316 CXCL9Q07325 125 aa11.2□□□□□ -0.62
PGK1-201ENST00000373316 FUT2Q10981 343 aa11.2□□□□□ -0.62
PGK1-201ENST00000373316 TTI2Q6NXR4 508 aa11.2□□□□□ -0.62
PGK1-201ENST00000373316 HDAC11Q96DB2 347 aa11.2□□□□□ -0.62
PGK1-201ENST00000373316 ZBTB18Q99592 522 aa11.2□□□□□ -0.62
PGK1-201ENST00000373316 RIOX1Q9H6W3 641 aa11.2□□□□□ -0.62
PGK1-201ENST00000373316 JPH1Q9HDC5 661 aaPredicted RBP11.2□□□□□ -0.62
PGK1-201ENST00000373316 BFARQ9NZS9 450 aa11.2□□□□□ -0.62
PGK1-201ENST00000373316 APOL1O14791 398 aa11.19□□□□□ -0.62
PGK1-201ENST00000373316 SLC16A4O15374 487 aa11.19□□□□□ -0.62
PGK1-201ENST00000373316 SRGAP2O75044 1071 aa11.19□□□□□ -0.62
PGK1-201ENST00000373316 COBLO75128 1261 aa11.19□□□□□ -0.62
PGK1-201ENST00000373316 SREBF1P36956 1147 aa11.19□□□□□ -0.62
PGK1-201ENST00000373316 NOP14P78316 857 aaKnown RBP11.19□□□□□ -0.62
PGK1-201ENST00000373316 TMPRSS15P98073 1019 aa11.19□□□□□ -0.62
PGK1-201ENST00000373316 JADE1Q6IE81 842 aa11.19□□□□□ -0.62
PGK1-201ENST00000373316 AGBL3Q8NEM8 1001 aa11.19□□□□□ -0.62
PGK1-201ENST00000373316 REEP2Q9BRK0 252 aa11.19□□□□□ -0.62
PGK1-201ENST00000373316 MRIQ9BWK5 157 aa11.19□□□□□ -0.62
PGK1-201ENST00000373316 KLC4Q9NSK0 619 aa11.19□□□□□ -0.62
PGK1-201ENST00000373316 LRRIQ3A6PVS8 624 aaPredicted RBP11.19□□□□□ -0.62
PGK1-201ENST00000373316 HUS1O60921 280 aa11.19□□□□□ -0.62
PGK1-201ENST00000373316 SMIM24O75264 130 aa11.19□□□□□ -0.62
PGK1-201ENST00000373316 PPFIA2O75334 1257 aa11.19□□□□□ -0.62
PGK1-201ENST00000373316 KLHL2O95198 593 aa11.19□□□□□ -0.62
PGK1-201ENST00000373316 LSM8O95777 96 aaKnown RBP11.19□□□□□ -0.62
PGK1-201ENST00000373316 CNTFP26441 200 aa11.19□□□□□ -0.62
PGK1-201ENST00000373316 SHMT1P34896 483 aa11.19□□□□□ -0.62
PGK1-201ENST00000373316 CDR2Q01850 454 aa11.19□□□□□ -0.62
PGK1-201ENST00000373316 MTA1Q13330 715 aa11.19□□□□□ -0.62
PGK1-201ENST00000373316 HIF1AQ16665 826 aa11.19□□□□□ -0.62
PGK1-201ENST00000373316 TMEM270Q6UE05 265 aa11.19□□□□□ -0.62
PGK1-201ENST00000373316 ANO5Q75V66 913 aa11.19□□□□□ -0.62
PGK1-201ENST00000373316 EFL1Q7Z2Z2 1120 aaKnown RBP11.19□□□□□ -0.62
PGK1-201ENST00000373316 RNF139Q8WU17 664 aa11.19□□□□□ -0.62
PGK1-201ENST00000373316 ARHGEF26Q96DR7 871 aa11.19□□□□□ -0.62
PGK1-201ENST00000373316 FAM163AQ96GL9 167 aaPredicted RBP11.19□□□□□ -0.62
PGK1-201ENST00000373316 JMJD4Q9H9V9 463 aa11.19□□□□□ -0.62
PGK1-201ENST00000373316 SNED1Q8TER0 1413 aa11.19□□□□□ -0.62
PGK1-201ENST00000373316 ZNF568Q3ZCX4 644 aa11.19□□□□□ -0.62
PGK1-201ENST00000373316 FAM133BQ5BKY9 247 aaKnown RBP11.19□□□□□ -0.62
PGK1-201ENST00000373316 EFHC2Q5JST6 749 aa11.19□□□□□ -0.62
PGK1-201ENST00000373316 BEND6Q5SZJ8 279 aaPredicted RBP11.19□□□□□ -0.62
PGK1-201ENST00000373316 HEATR6Q6AI08 1181 aaKnown RBP11.19□□□□□ -0.62
PGK1-201ENST00000373316 RANBP17Q9H2T7 1088 aaKnown RBP11.19□□□□□ -0.62
PGK1-201ENST00000373316 ZWILCHQ9H900 591 aa11.19□□□□□ -0.62
PGK1-201ENST00000373316 NFKBIEO00221 500 aa11.19□□□□□ -0.62
PGK1-201ENST00000373316 ACSL3O95573 720 aa11.19□□□□□ -0.62
PGK1-201ENST00000373316 CORO7P57737 925 aa11.19□□□□□ -0.62
PGK1-201ENST00000373316 SMYD5Q6GMV2 418 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms